Neodiprion fabricii: 124177231
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Entry
124177231 CDS
T08986
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfb03009
]
124177231
Enzymes [BR:
nfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124177231
Ribosome biogenesis [BR:
nfb03009
]
Eukaryotic type
Pre-60S particles
Helicases
124177231
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
124177231
NCBI-ProteinID:
XP_046415335
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All DBs
Position
3:33504248..33507808
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AA seq
584 aa
AA seq
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MKSQKWEDLEVPLSKPILETLKVQNFQTMTPVQTACIPLLLKGKDVAAEAVTGSGKTLAF
LIPMLEMLQRREDGWKKLEIGSIIVSPTRELATQINEVLANFLIRIPTLKQVLLVGGTTV
DEDVIKLKNGANIIVATPGRLEDILSNCKDINLASSVKALELLVLDEADRLLDLGFTATI
NTILSYLPRLRRTGLFSATQTKELQQLIRAGLRNPVVVSVKEKASTSTPSMLINSCVIVT
AENKLATMYNFIKKKGTDLKYMIFFSTCACVDYFSHVLKMLFQSSNIFALHGKMKDKRYK
IFEQFRSSDNGLLLCTDVMARGVDIPEVDWVLQYDPPSNASSFVHRCGRTARIGNEGNAL
LFLLESEDAYIDFIRRNQKVDLNKIELEQPTSVVKCLKVMRSIQQSDRLIFDKANRAFVS
YIQAYQKHECSLILRLKDLNLGKVAMGFGLLKMPRMPELKKQDTSLFQDPAVDVNSIAYK
DKQRESKRLEKLKVFRQTGIWPTKNKRPAKQTEPWSETKKKKLDTKDKRNKRKEKKALTG
PVKKKRKKVCQEDIEELAKDIALMKKLKKKKISQEQFDSAFGVN
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctcaaaaatgggaagacttggaagtcccactaagcaaacctattctggaaact
ctaaaagtacaaaactttcaaacgatgacacctgtccagactgcttgcataccgttgcta
ctaaaaggaaaggatgttgctgcagaggctgtaacgggcagtggcaaaacactggcattc
ttaattccaatgctagaaatgttacagagacgtgaggacggttggaaaaagttggaaatt
ggtagcattattgtatcaccaacacgggaattagctacacagataaacgaagtccttgcc
aactttctgatccgcattccaactttaaaacaagtgttgctagtcggtgggacaactgtt
gatgaagatgtaataaagctcaagaatggtgctaatattattgtagccacccctggaaga
ttggaagatattctgtcgaattgcaaagatatcaatttagcctcaagcgtgaaagctttg
gaattactggtactagatgaagctgatagacttctagatttaggatttacagcgacgata
aatacaattttgagctatttacctagattacggagaactggattgttctcagcgactcaa
acaaaagaattacagcaattgataagagctggcttacgtaatccagttgtagtgtcagtc
aaagaaaaagctagtacttctaccccttcgatgttgattaacagttgcgtgattgtcacc
gcagaaaataaacttgctaccatgtacaactttatcaaaaagaaaggaactgatctgaag
tacatgatatttttttcgacatgcgcctgtgtcgattattttagtcatgttcttaaaatg
ctctttcaatcttcaaatatatttgcacttcatgggaaaatgaaagataaacgatataaa
attttcgaacagtttcgaagctccgataatggtttattattatgcaccgatgttatggca
cgtggagttgatataccagaagttgattgggttttacaatatgatccgccatcgaatgcc
agtagctttgtacacagatgcggccgcacagccagaatcggtaacgagggaaatgctcta
ttatttctgttggagtccgaagatgcttacatagatttcatcaggaggaatcagaaagta
gatttaaataaaatcgaattagaacaacctacaagtgtggtgaagtgtttaaaagtcatg
agaagtatacagcaaagtgatagacttatatttgataaagctaacagggcatttgtatca
tatatacaagcttaccaaaaacatgaatgcagtcttatactcaggttaaaggatctcaac
ttaggaaaagttgctatgggttttgggttattgaaaatgccccgaatgccagaacttaaa
aaacaggacacgtcattgtttcaagatcctgcagttgacgtaaattcaattgcttacaaa
gacaagcagcgcgaatctaaaagattggagaaattaaaagtcttccgacaaacaggtatt
tggccaacaaagaataagcgtcctgccaagcaaactgaaccctggtccgaaactaagaag
aaaaaattagatacaaaggataaacgtaataagcgtaaagaaaaaaaagctcttactgga
ccagtcaagaaaaaacgcaaaaaagtatgccaagaagatatagaagaattggcaaaagat
atagcattgatgaagaaattaaaaaagaaaaagatctcacaagaacaatttgattcagct
ttcggagtcaattga
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