Neodiprion fabricii: 124177620
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Entry
124177620 CDS
T08986
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124177620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfb04121
]
124177620
Enzymes [BR:
nfb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124177620
Ubiquitin system [BR:
nfb04121
]
Ubiquitin ligases (E3)
HECT type E3
124177620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7679
Motif
Other DBs
NCBI-GeneID:
124177620
NCBI-ProteinID:
XP_046416139
LinkDB
All DBs
Position
1:40235203..40243421
Genome browser
AA seq
1055 aa
AA seq
DB search
MYSFDGDYRRKPQQNLAGASRRDEKAVLLQHAQLERLKREQQRQRHDAAVKIQAQIRQFV
TRQLKREHERHNFDVAQKALGNNPPSLEEISPLLRQLLFFYDEALDGSRLLWILRHVLKD
HKRIKELTTISTEWSWRLRWILKLSMRKIVDTVSQDPARSIAVPLRVLEVFTVKENTEGI
LKTETDRHLIGIFVYLAENKYFVQLRRLIDEKVPPLLEATPVPPTPMAACLLDMIKRPLG
LIHTMEENNKFSITILEEFCYSILAPRMSEPIKMLVLPALTEFQNLPYKQLIDCINRLAN
EPTLCLLYSILSLEPVRFACRRSRNTLTNYLQVLASLSSTIASPPIEQSLNFTDESDSDT
DTDMVDQDEADIRQKCIEMLNAENRVQGILVVVDQSEDPLMLQALCQLCHNLLITNKMAV
PKYKLLYMLAFKPSFLRHLWTALMSVRQTSLFGGVTLLLQVVSRGIALDADNTKKIVPLL
AVFCSLFSLLIATLHDTEFFNDGSQVGTSGASQQTMPFTTVELVPLSAHLKGVCLGLVEL
AFPDTRPTVRDDYKTAVLGASATQTHQNTQMWVHLFKVTVGLLRQLHTRDLRKQFCPEGH
WIASNIVIPLDKPQDFTFRRRRLRGYVPFQGLRAFTREDLEEGPPWSTKEVRTLTLLREI
PFVVPFNDRVVVFQSLLNHDKEEQQGEWTNFMRGPYIQIAVRRNYLYEDAFDKLSPENES
ELRLKMKVQLVNAAGLEEAGVDGGGLFREFLSELLKTSFDPNRGFFRLTKDNMLYPNPTV
HLLVDDFPKHYYFIGRILGKALYENLLVELPFAEFFLSKIVGRQADVDVHHLASLDPIMY
RNLLYLKSYQGDVTELGLDFTVLSDELGERRIDELKPGGANVTVTSHNRIEYIHLMADYK
LNKQIRAQCYAFKQGISNVVSLDWLQMFNNKELQVLISGAQIPVDVRDLKLHTNYTGGYT
PDHPTIISFWKIADEFTDQQRSQLLKFVTSCSRPPLLGFKELDPPFCIQHAGSVDRLPTS
STCMNLLKLPEFPDERTLREKLLYAIQAGAGFELS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtatagctttgacggagactacagacgaaaaccccaacaaaatctagctggtgctagc
cgtcgtgatgaaaaagctgtgctactgcagcatgctcaattggaacgtttaaaacgagaa
caacagcgtcaaaggcatgacgccgctgtgaaaatccaagctcagattcgtcaatttgta
actagacaattaaagcgtgagcatgaaaggcacaactttgatgtagcgcagaaggcattg
ggtaataatccgccaagcttggaagagatttcccctttgctcagacaattgttatttttc
tatgacgaagctctagatggatccagattgctatggatacttagacacgtcttgaaagat
cacaaacgcataaaagaactgactaccatatctacagagtggtcatggagattacggtgg
attctcaaattatcaatgcggaaaatagttgacacggtttctcaagatcctgctcgttct
atagcagttcctctgcgagtcctggaagtgttcactgtgaaagaaaatacagagggtatt
ttaaagacagaaacagatcgccatttgatcggcatatttgtatatttggcagaaaacaag
tactttgtgcaattgagaaggttgatagatgaaaaagtgcctcctttgttggaagcaacg
cctgtaccaccgacaccgatggcggcatgtctattggatatgattaaacgaccgcttgga
cttattcataccatggaagagaataacaaattttccattacgatacttgaagagttctgc
tacagcattcttgcgccaagaatgtcagagccaattaagatgcttgtcttacctgcattg
acagaatttcaaaatctcccgtataaacaattaatcgattgtataaatagacttgcaaat
gagcctactctgtgccttttgtacagcatattatctctggaaccagtcagatttgcctgc
agaaggtcaaggaacactctgacgaactaccttcaagttttggcatcgctgagttcgaca
atagcctccccacctatagagcagagtttaaatttcaccgacgaatcggacagtgacaca
gacactgatatggtcgatcaggatgaagcggacatacgtcaaaaatgcatagaaatgttg
aatgcagaaaatcgtgtacaaggtattcttgtggtggtggatcaaagcgaggatcccctt
atgctccaagccctatgtcaattgtgccacaatcttttgataactaacaaaatggctgtt
cctaaatataaactactctacatgcttgcgttcaaaccgtcgttccttcgtcatttatgg
acggcactaatgtctgttcgtcagacatccctgtttgggggtgtcactcttctactccaa
gtagtttctcgaggtatcgccctagatgcagataatacaaaaaagattgtaccacttttg
gcagttttttgctcgctcttcagcctgcttattgcaacgctgcacgacactgaattcttc
aatgatggctcccaagttggaacaagtggtgctagccaacagacaatgccattcacgact
gtggaactagtgccactttctgctcatttgaaaggggtttgcttgggcttggtcgagctc
gcgttccccgatacccggccgacagtacgagatgattataaaactgcagtacttggtgcc
tctgctacccaaactcaccaaaacacacaaatgtgggtgcacttgttcaaagtaaccgta
ggtttgctgcggcaacttcacactcgtgatctgagaaaacaattttgccctgaaggccat
tggatagcgtcgaacattgtgataccactggacaaaccacaggattttacattccgacgt
cgcagattaagagggtatgtaccatttcaaggactgcgagcatttactcgtgaagatttg
gaggaaggccctccttggtcgacaaaggaagtgcgaacgcttacgctgcttcgtgaaata
ccctttgttgtgccattcaatgatcgtgtagtggtatttcaatctctcttgaatcacgac
aaagaggaacagcaaggcgaatggacgaatttcatgcggggtccatacatacagattgct
gtgagacggaattacttgtacgaggatgcgtttgacaaactttcaccagagaacgagtct
gagttgaggctgaaaatgaaggttcaattggtgaacgcagctggtcttgaagaggctggt
gtagatgggggtggactattccgagagtttctttcagaattgttaaaaaccagctttgat
ccaaatcgcggatttttcaggctgaccaaagacaacatgttgtatccgaatccaacggtg
caccttcttgttgatgattttccaaaacactactacttcattggtcgtatattgggaaag
gcactgtacgagaatttgttagttgaattgccgtttgccgaattttttttatcaaaaatt
gtcggcaggcaagccgatgttgacgttcatcacttggcttccctcgatccaataatgtac
aggaatctcttgtatctgaaaagttatcaaggcgatgttaccgaactggggttagacttt
acagttttatctgatgaacttggggagaggcgcattgacgagctcaagcctggaggagcg
aacgtcacagtaacttcgcacaatcggatagaatacatccatttaatggctgactacaaa
ttaaacaaacagataagagcccagtgctatgcattcaagcagggcataagtaatgtcgta
tccctcgactggcttcaaatgttcaataataaagaactacaggtcttaatctccggtgca
cagatacctgtcgatgtacgcgacttgaaactacatacaaactataccggagggtatacc
cccgatcaccctacaataatttccttttggaaaattgctgacgaattcacggaccaacag
agaagtcaactgctcaaatttgtgacaagttgcagtcgaccaccactgcttggattcaag
gaacttgatccacctttctgcattcaacacgcaggtagcgtcgatcggcttccgacttcg
agcacctgcatgaaccttttaaaacttccggaatttcctgacgaaaggacactaagggaa
aagcttctatacgctatacaagcaggtgcaggttttgagcttagctaa
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integrated database retrieval system
