Neodiprion fabricii: 124178107
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Entry
124178107 CDS
T08986
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124178107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfb04121
]
124178107
Enzymes [BR:
nfb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124178107
Ubiquitin system [BR:
nfb04121
]
Ubiquitin ligases (E3)
HECT type E3
124178107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
124178107
NCBI-ProteinID:
XP_046417207
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All DBs
Position
3:22300777..22313020
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AA seq
1081 aa
AA seq
DB search
MASWTKKRRLESESQVIVSTSRLVRTKDMFCWGSTVHGELGLGGIEDENILVPRELEFKK
STQVEHIACGENYTVVITRDGQLYSCGNNDHGQLGHEKPRKRLHLIPGLDAFLFKRAACG
ASHTMAVNEWGQLFSWGSNADGQLGLNLNNFDERTPRMVKTLGASVVVQIACGLKHTLAL
TNNGELYAWGCNKEGQLGIGGESIKELKPKLVTSLASVPMSYIACGGYHSIAVSKSGAVF
SWGRNIYGQLGLNDTRGRGLPSQLRTLRNIKVRYVSCGEDFSIFLTMDGGVFSCGAGMYG
QLGHGNNNSDILPRQVMELMGSTVTQVSCGRRHTLAFVPSRGRVYAWGLGGAGQLGARVS
RSVSTPQVVLGPWVSPNGAAMVQPDISATPHSVDCVVRHVFTGGDHCFATVTHRKDNIQP
DDCRILPPSTQVLTVTEEQLGACQRVPKDASVDHDLLTYLETVFSSQACLNASFLLDDDA
HYGCSSKHHGVDLDKATKLFTTIADLDNNTIKELIFTCLTESLLPTLMPSPPDVESLRVY
LVLPLYHGFDDPKLCNSLHNPFSKAVSQLKPEALKVISLWWSQAPKDYFERLVRSYKSVV
SHFLQQPKVVENKSVVWDATLQLALDFLRLLNKLNHTTADGLRVPYTSFHLPELSECIDV
RTDYVKWLTEKHPYASHKIFFCNYPFLFDAQAKTMLLETDQAIQMRSAMNEAATRAITQM
LFTPFPTGNISAYVTLNVSRENLVNDTLRELSQYNSIDLKKPLKVKFHGEEAEDAGGVKK
EFFMLLLREILDPKYGMFKQYEETRTIWFSEDSLEDEVMYFLIGLLCGLVIYNFIIIDLP
FPLALYKKLLQEPVGLADVKDMSPVLAKSLQDVLDYNEPDLEEVFCLHFEVTREVFGEQR
IYELITNGSNVPVTLENKQEFVDLYVDYLLNKSVDSHFQAFYQGFHKVCGGRVLELFHSH
ELMAVIVGNENYDWDELEKNAVYKNGYTKNDPTIEMFWKVFHELSLEEKKKFLLFLTGSD
RIPIQGMKAIKITIQPMSDDRFLPVAHTCFDLLDLPRYQTRERLRYKLLQAIQQTQGFSL
V
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttggacaaaaaaacggcgcctggaaagtgaatcgcaagtcatagtcagtacg
tctagacttgtaagaactaaagatatgttttgctggggtagtactgttcatggcgaactt
ggccttggaggtatagaagatgagaatattcttgttccccgtgaattggaattcaaaaag
tctactcaagtagaacatattgcttgtggtgagaactacactgttgttataactcgagat
ggtcagctctattcgtgtggtaacaacgatcatggacaacttggtcacgaaaaaccgagg
aaaaggttacatcttataccgggtctggatgcatttttattcaaaagagctgcctgtggc
gcaagtcacacaatggctgttaacgagtggggccaactttttagttggggttcgaatgct
gatggccagctaggattgaatttgaacaatttcgatgaacgcactccacggatggtgaaa
actttaggtgcaagcgttgttgtgcaaatagcttgtggactaaagcacacacttgcacta
acaaacaatggagaactttatgcctggggctgcaataaagaaggacagcttggtattggt
ggcgaatcaattaaagaattgaaaccaaagctggtcaccagcttagcttctgtccctatg
tcttatatcgcgtgtggtggttaccacagcattgcagtctcaaaatctggtgctgttttt
tcttggggcagaaatatatatggtcagttaggattgaacgatactcgcggtcggggtcta
ccttcccaattaagaacgcttcgtaatataaaagtacgatatgtcagctgtggtgaggac
ttttctatatttttaacaatggatggtggagttttctcttgtggtgcaggcatgtatgga
caactgggccatggcaataataatagtgatattttaccccgccaagtcatggaacttatg
ggcagtacagttacacaggtgtcctgcggacgacggcacactcttgccttcgttccatct
agaggtcgcgtttatgcttggggtcttggcggagctggacaattgggtgctcgagtttct
cgaagtgtttccactccacaggtggtacttggcccctgggtttcgcctaacggagccgcc
atggttcaacctgatatctcagctactccacattctgtggattgtgttgttcgacatgtt
ttcactggcggtgatcattgctttgccactgtaacgcatagaaaggataacattcaacca
gacgactgcagaatattaccaccatcaacacaagtactgacagttactgaggaacaattg
ggagcttgccaaagagtgccaaaagatgcatctgttgatcatgaccttctcacatatcta
gagactgtattcagtagtcaggcatgtctaaatgcatcattcttactcgatgacgatgct
cattatggatgttcaagcaaacatcacggtgtggatcttgataaagcgacaaaattgttt
acaaccattgctgatcttgacaacaatactatcaaagaactgatctttacatgtctgact
gaaagtctgttaccaaccctaatgccatcaccccctgatgtcgaatcattacgagtatat
ttggtgctgcctctctaccatggctttgacgaccctaaactttgtaatagcttacacaac
ccgttttctaaagcagtctcacaactaaaacctgaggccttaaaagtcataagcttatgg
tggagtcaggcacccaaggattattttgaaagattagtccggagttataaatcagtcgtt
tcacacttcttgcagcagccaaaagttgtagaaaacaagagtgtggtatgggatgcaaca
cttcagcttgctttggactttttaagattattgaacaaactaaatcacacaacggctgat
ggcttacgagtaccgtatacatcgtttcatttaccagagctgtctgagtgtatcgacgtg
agaactgattatgtgaaatggctcacggaaaaacacccgtatgcatcccataaaatattt
ttctgcaactatccatttctgtttgatgctcaagcaaagacaatgttactagaaacagat
caagcaatacagatgcgatcagcaatgaacgaagcagcgactagagcaataactcaaatg
ttatttactccttttcctactggaaatattagtgcatacgtgacattgaatgtatctcgg
gaaaatttagttaatgacacactgagagagttgtcccaatataactcaattgatcttaaa
aagcccctcaaggtgaaatttcatggcgaagaagccgaagatgctggcggtgttaagaaa
gaatttttcatgcttctacttagagaaattttagatccaaaatatggtatgttcaaacaa
tacgaggaaacgagaaccatttggttcagtgaagattcccttgaggacgaagtgatgtat
tttttgatcggtcttctctgtgggctagtcatttacaattttatcatcattgatttacca
tttccactcgctttgtacaaaaagttgttacaagaacctgttggacttgctgatgttaaa
gacatgtctcctgttctggctaagagtttacaagatgtcctggattacaatgaaccagat
ttagaagaggtattttgtttgcattttgaagtgacgagagaagtttttggtgaacaaaga
atttatgaattaatcacaaatggtagtaacgttcctgttacattagagaacaagcaagag
ttcgtcgatttatatgtagactacctgctcaacaaatcagtagattcgcatttccaagca
ttttatcaaggatttcacaaagtatgtggaggacgcgttctagaattattccacagccac
gaattaatggccgtcattgttggtaatgaaaattacgattgggatgagctggaaaaaaat
gcagtttacaaaaatggctacactaagaatgatcctacaattgaaatgttctggaaagtt
tttcatgaactttctttagaagagaagaagaaattcctattatttttaacgggtagtgac
aggatacccatacaaggcatgaaagctatcaaaataacaattcagccgatgtcagatgac
cgatttttgccagtagcccatacgtgttttgatctgttagatttacctcggtaccaaacg
cgagaaagattacgttacaaacttctccaggctatccagcagacccagggattctcgttg
gtctag
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