Neodiprion fabricii: 124178690
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Entry
124178690 CDS
T08986
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
nfb
Neodiprion fabricii
Pathway
nfb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124178690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124178690
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124178690
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124178690
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124178690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
124178690
NCBI-ProteinID:
XP_046418199
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All DBs
Position
3:complement(19043330..19046771)
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AA seq
292 aa
AA seq
DB search
MECIVANVEHMKFDIEIALDEQYGALPLPFTGMDKSIAAVCQFYPRGTCVKGGSCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETK
VRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFCPEGPNCKFMHPRFELPAVQDMQPK
EGKKVMITCHFCGEGGHKAIYCNKMPPDIREAQARQEMEGGGQGAHPPHHHINSHSGPPP
RGPQKPLEEVTCYKCGTKGHYANKCPKGHLAFLSHTGGAAAAASGQNPSYRR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcattgtagctaacgtggaacacatgaaatttgacatagaaatcgctctggac
gaacagtatggagccctgccgttacctttcacggggatggacaaatccatcgctgcagta
tgtcaattttatccacggggaacctgtgtcaaaggaggctcttgcccttttagacacgtc
agaggggacagaaccattgtatgtaaacactggttgcgaggcctctgcaaaaagggagac
cagtgtgaatttcttcatgaatatgacatgactaagatgcctgaatgctacttctactcc
cgattcaatgcgtgccacaacaaagaatgtccgtttcttcacattgatcctgagacaaaa
gttcgtgattgtccttggtacgatcgcggattctgcagacatggtcctctctgccggcat
aggcatgtacgaagggttctatgcatggcatatctagccgggttttgcccagaaggacca
aactgtaaattcatgcatcctcgttttgagctgcctgcagtccaagatatgcaaccaaag
gaaggaaagaaggtgatgataacatgccacttttgtggtgaaggtggtcacaaagcaatc
tactgcaacaagatgcctcctgatattagagaagctcaagcaaggcaagaaatggagggt
ggtggccagggagcacatcctccacatcaccacatcaattcacacagtggtccccctcca
cgaggacctcagaaacctttggaagaggtgacatgttacaagtgcggtacaaaaggacac
tacgcgaataagtgcccaaagggacatttagctttccttagtcacactggaggggcagcg
gcagctgccagtggtcaaaatccaagttatagacgatga
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