Neodiprion fabricii: 124178714
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Entry
124178714 CDS
T08986
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfb03041
]
124178714
Enzymes [BR:
nfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124178714
Spliceosome [BR:
nfb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124178714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
CMS1
SNF2-rel_dom
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
124178714
NCBI-ProteinID:
XP_046418231
LinkDB
All DBs
Position
3:complement(39220549..39229727)
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AA seq
657 aa
AA seq
DB search
MSALDEWNSNEQSNTENIRTQNYVRDGSGPSTSHDNGTWRNNNGARPKGNRGRDRGPKTE
WKNKNTTKSRGLEILIDSTKVGKLIGRGGCKIKELQDQSGTKINVGKPVDYINTPVTLIG
SPEAQEKAKALIDELLTDKPPPSLPPKVSSHSNADNNDEFLNFDWSKASRDYEEFRKEKW
AKCPPLIKNFYHEDPVVANMSKGKASYIRKINNNISVSKVFEDIDENGQEGSDDLTIPNP
IETFEQAFQDYPEILEEIRRQGFVKPSPIQCQAWPILLSGKDLIGIAQTGTGKTLAFLLP
ALIHIEGQTVPRLERSGPNILIIAPTRELALQIEQEVRKYEYRGIKAVCVYGGGCRKDQV
DTIVRGVEIIIATPGRLNDLVHSGHVDVASITYLVLDEADRMLDLGFEPQIRKVLLDIRP
DRQTIMTSATWPLGVRRLAQSYMKNPLQVCVGSLDLAAVHSVMQTVLVVDESEKPEMLND
FFLNMGPEDKVIVFIGKKCRVDDLASDLALQGILSQSIHGGREQCDREQALDDIKSGEVR
ILLATDVASRGIDIDDITHVFNYDFPRDIEEYVHRVGRTGRAGKTGQSITLMTRSDWSHA
KKLIEILEEANQDVPDEVQRMAKRHFAWKERRAQEKQRERSDAGSSRSGGGRRNGGQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccctcgatgagtggaacagcaatgagcagagtaatacggagaatatacgtacg
cagaattatgtacgagatggaagcggaccctccacaagccatgataatggaacctggaga
aataacaatggtgctcgacctaagggaaaccgtggaagggatcgcggacctaaaacagaa
tggaagaataaaaacactacaaaatctcgaggacttgagatattgatagattccacaaaa
gttggcaaacttattggcagaggaggttgcaaaattaaggagttgcaagaccagagtggt
actaagataaatgttggtaaaccagtggactatataaatacaccagtgactttgattggc
tctccggaagcacaagaaaaggctaaagcattgattgatgaattattaactgacaaacca
ccgccatcactgccaccaaaagttagttctcattccaacgctgacaataatgatgaattt
ttaaacttcgactggtccaaagccagtagagactacgaggagttccgcaaagaaaaatgg
gctaaatgtccaccgctcattaaaaatttctaccacgaagacccagtcgtggcaaatatg
tcaaaagggaaagcgtcttatattcggaaaataaacaacaacatttccgttagtaaagtt
tttgaagatattgacgaaaatggtcaggaaggcagtgatgacctaacaataccaaatccc
atcgaaacattcgaacaagcatttcaggattacccagaaatcttggaagagatacgaagg
caaggatttgtaaaaccaagtcccatacaatgtcaagcatggcctatccttttaagtggc
aaggatcttataggaattgctcagactggcacaggtaaaacacttgcgtttttattgcca
gcgctaatacacatcgagggacagactgttccacgattagaacgcagtggaccgaacatt
cttataattgctccaacaagagaattagctctgcaaattgagcaagaagtgcgaaagtac
gaatatcggggaataaaggcagtgtgtgtgtacggaggtggatgtcggaaggatcaggtc
gatacaatagttcgtggagttgaaataattatcgcaacacctggaagattaaatgacttg
gtgcactctgggcatgtggatgtagcatccatcacttatctcgtacttgatgaagctgac
cgcatgcttgacttaggctttgaaccgcaaattagaaaagttctgttagacatccgtcct
gatcgtcaaactattatgactagtgcaacttggccacttggagtcagacgccttgcccaa
tcttacatgaaaaacccgctccaagtttgtgttggatcgctagatttagcagctgtgcat
tctgtaatgcaaacggttcttgtagtagacgagagcgagaaaccagaaatgttaaatgat
tttttcctcaatatgggccctgaggacaaagtaattgtttttatcgggaagaagtgtcgt
gttgatgatttagctagtgatttggcactgcaaggtatcctcagtcaaagtatacatggt
ggccgtgagcagtgcgatagagagcaggcgcttgatgatatcaaatccggcgaggttcga
attctacttgcgactgacgttgccagccgtggtatagacatcgacgacataacgcacgta
ttcaactatgattttccacgcgatatagaggaatatgttcatagagtcggtaggactgga
agggcagggaaaacaggacaaagtattactttaatgacccgaagtgattggtcacacgct
aaaaaacttattgaaatccttgaggaagctaatcaggatgtacctgatgaagtgcagaga
atggctaagcggcacttcgcatggaaagaaagacgggcacaggagaagcagcgtgagcgc
tccgatgctggtagtagtcgcagcggtgggggcagacgtaacggcggtcaatga
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