Neodiprion fabricii: 124178982
Help
Entry
124178982 CDS
T08986
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124178982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124178982
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124178982
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124178982
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124178982
U7-dependent histone pre-mRNA processing factors
124178982
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
124178982
NCBI-ProteinID:
XP_046418840
LinkDB
All DBs
Position
1:5099543..5102155
Genome browser
AA seq
686 aa
AA seq
DB search
MSSKRKPDTQVPAEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDAL
PFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKV
SNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVK
ILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRG
GRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKI
RRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDSKNGVI
IAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPH
VVLVHGEQNEMGRLKAALQREYEDDPHTIMEIHNPRNTVAVELYFRGEKTAKVMGTLAME
TPKPGQKLSGVLVKRNFNYHVLAPCDLSKYTDMSMSQVVQRQSVHFSTSLPVLKHLLTQI
AGSIENIDDKKMRVFKNVDVIVEGKVVTMEWIATPVNDMYADSVLTAILQAEMMEQPPKT
LPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSTE
DETFQQIVQTAVSKLHQSLAPPCDTL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaaacggaagccggacacccaagtgccggcagaagaaagcgatttactttcg
attcggccgcttggtgccggacaagaagttggaagatcttgcattatgctggaattcaaa
ggaaaaaagataatgctggactgtggaatacatccaggtctctccggcatggatgctctt
ccattcgttgacttggtagaagccgatgaaatcgacctgcttctgatatctcattttcac
cttgatcactgtggagccttaccttggtttttgcaaaaaactagttttaagggacgttgt
ttcatgactcacgcgacaaaagctatatatcgctggttattgtccgattacatcaaagtc
agtaacattgccacggagcaaatgttgtataccgagtctgacctagaaactagtatggat
aaaatagagacgataaatttccacgaggaaaaagatgtcttcggtattaaattttgggca
tataatgctggccacgttcttggcgctgctatgttcatgatcgaaattgctggtgttaaa
atactgtacacaggtgattttagtcggcaagaagacaggcatttgatggctgccgaaata
ccaaacattcatcctgacgttttgataactgaatccacctacggaactcacattcatgag
aagcgggaagatcgagaaggaagatttactaatttggtacacgaaattgtgaacagaggc
ggaagatgcttgattcctgtatttgccctgggacgagcacaagagctactgctaatcctg
gatgaatactggagccaacaccccgagttgcatgaaattcccatttattatgcttcgtct
ttggccaaaaaatgtatggcagtttatcaaacttacgttaacgcgatgaatgacaaaata
cggagacagatagcaattaacaacccttttgtattcaagcacatttcaaacttgaaaggg
atcgatcatttcgaagacataggaccttgtgtcgttatggcatctcctggtatgatgcag
agtggcttgtccagagaattatttgagtcttggtgcactgattcgaagaatggagtaata
attgccggttattgcgtagaggggactctggccaaaacaatcctctccgaacccgaagaa
attacaaccatgtctggtcaaaaattgcctttgaaaatgtcagtggattatatatcattc
tcagcccataccgactatcaacagacgtcagagtttattaggattttgaaaccaccacat
gttgtattggttcatggggaacaaaatgaaatgggcagattaaaagctgctctacaaagg
gaatacgaggacgatccacacaccataatggagatacacaatcctaggaatacagtggca
gtagagctgtattttcgtggtgaaaaaacagcaaaagttatgggaactttagctatggaa
actccaaaacctggacagaagttatcaggtgttctggtgaaaagaaacttcaattaccac
gtactggcgccttgtgatttatcgaagtataccgatatgagcatgagccaggtggttcaa
agacaaagcgtacatttttctacatcgttaccggtattgaaacatttgctaacgcaaatt
gctggaagcatagaaaatatcgatgataaaaagatgagagtattcaaaaatgttgatgtt
attgtagaaggaaaagttgtcacaatggaatggatagcgactcctgtaaacgacatgtat
gcagattcagttttgactgcaatattgcaagctgaaatgatggaacaaccgccgaaaaca
ctccctgcaccaacgaaaatggaccgaatgcatttcaaggaatgtctgatagaaatgctt
caagaaatgtttggtgaagattcggtacccaaaattttcaaaggcgaaaaactgtatgtt
acagttgatggtaaaaaggctcacatagatttgttaaatttagaagtaacaagcacggag
gatgaaacctttcaacaaatagtccagactgccgtttccaagttacatcagtcattggct
ccgccatgcgatactttataa
DBGET
integrated database retrieval system
