Neodiprion fabricii: 124178994
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Entry
124178994 CDS
T08986
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
nfb
Neodiprion fabricii
Pathway
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124178994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124178994
03041 Spliceosome [BR:
nfb03041
]
124178994
03036 Chromosome and associated proteins [BR:
nfb03036
]
124178994
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124178994
Spliceosome [BR:
nfb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
124178994
Complex B
124178994
Complex C
U2 SnRNP specific factors
124178994
Chromosome and associated proteins [BR:
nfb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
124178994
TFTC complex
124178994
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
124178994
NCBI-ProteinID:
XP_046418859
LinkDB
All DBs
Position
3:20045808..20053091
Genome browser
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNAFDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKHSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMTCQVADLANEDT
PQLYMTCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAAGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGSKEADNSEDSVSQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQAVLAMSSRSW
LSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFVIHPDSAHLIILETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARELAE
AFLSEEPNEAVFGAPRAGPGLWASTLRLMAPATGQTLELHRLEQNYAALCLSLVRFANQG
DQQFLIVGVAKDYQLNPRVSNGGFLYTYKVNIDCTNLELMHKTVMDEVPLAICSYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAVGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWVTTTCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHIGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPTKQKGISGDLERT
PSEVSKKLEDVRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtataatctaacactgcagcgcgccaccggcatcacccatgccgtccatggt
aatttttccggcagtaaaatgcaagagatacttgtttcacgcggcaagtcgctcgagctg
ctcaggcccgacccgaacactggaaaagttcacaccctcttgaccgtcgaggtttttggc
atcgtcaggtctcttatggccttcaggcttacggggggcaccaaggattacattgtcgtt
gggtctgactctggtcgcattgtcattctagaatatattcctgctaaaaatgccttcgac
aaggtgcaccaagaaacctttggcaaaagtggttgtagaagaattgtacctggacaatat
ctagccattgatccaaaaggaagagcagttatgatcggtgctatcgagaagcagaaactg
gtttacatattgaacagggatccagaagcccgtttaacgatctcgtctccccttgaagcc
cacaaaagcaacactttagtctatcacacagttggtgtagatgttggatttgaaaatcca
atgtttgcctgcttggaaattgactatgaggaagcagacagtgatccgactggagacgca
gctgttaaaactcagcaaacgttgaccttatacgagcttgatcttggattgaatcacgta
gtgagaaagcacagtgaacctctagaggagcatgcaaatttccttgtttctgttcctgga
ggaaatgatggtcccagcggtgtccttatctgttcggagaattacctaacttacaagaat
cttggggatcagcacgatatccgttgcccaattcccagacgtagaaatgatttggacgac
cctgagcgcgggatgatcttcgtctgttcagcaactcacaaaaccaagagcatgttcttc
tttcttgcccaaactgagcaaggggatattttcaaaatcaccttggaaactgatgaagat
atggtaacggaaataaaactcaagtatttcgacacagttcctgtcgccacaagcatgtgt
gtcctgaaaacaggtttcttgttcgtcgcctctgaatttggaaatcactacctgtaccag
attgctcatcttggtgacgatgacgacgaaccagagttcagttcagcaatgccacttgaa
gaaggtgataccttcttttttgctcccagaccactcaggaacttggttctagttgatgaa
atggacagcctatcaccgatcatgacttgtcaggtcgctgatttggccaatgaagatact
cctcaactgtacatgacttgtggtagaggtccaagatccacgctgcgagttttgcgtcat
ggtctagaagtttcggaaatggcagtcagtgagctgcctggaaacccaaatgcagtctgg
acagtgaaacgaagagttgacgaagagtatgatgcatacatcatagtgtccttcgtcaat
gccactcttgtgcttagcatcggtgagactgttgaagaagtaacggactctggtttcctc
ggtacgacacctaccctcagttgttctgccctcggagaagacgccttagtacaggtatat
cctgatggaattcgtcacattagggccgacaaacgagtaaacgagtggaaagcaccaggt
aaaaagaccattgtaaaatgcgctgtgaatcaacgccaggttgtgattgccttgacggga
ggagaactggtatactttgagatggatcctactggccaactgaatgagtacacagagaga
aagaaaatgccatccgaagtgatgtgcatggcccttggtaacgtcgccgctggagaacaa
agatcctggttccttgctgttggacttcaagacaatacagtcagaatcatttccctagat
ccatctgactgtctggcacccagaagtatgcaggccttgcctgcagctgctgagagtctc
tgcattgttgaaatggggtctaaggaagctgacaattcggaagattctgtctctcagcaa
tcaagtttatacctgaatataggtttgcaaaacggcgtacttcttagaacggttttggac
ccgatttccggtgatttagccgatacgcgaactcgatatttggggtcccgaccggtaaaa
ttattcagaataaagatgcaaggcaatcaagcggtgttggcgatgtccagtcgctcttgg
ctcagctattactatcaaaatcgttttcatctgacacctttatcgtatgaaagtctggag
ttcgcgtccggtttcagttccgaacaatgtcctgaaggcatagtcgctatatccacaaat
actctgaggattctagctctcgaaaaacttggtgctgtttttaaccaagtcagtttcccg
cttgaatacacgccacgtaaatttgtgattcaccctgattctgcccatctaatcatcctc
gaaaccgagcataatgcatacactgaagaaactaagcaacagagacgcctgcaaatggcc
gaggaaatgcaggaggccgctggagccgaggaagcggctgtcgccagggagttggccgaa
gcttttctgtctgaagaaccaaatgaagctgtattcggcgctcctagagccggaccgggg
ctgtgggcctcaactttgagactgatggcacctgccactggacaaaccttggagctacat
cgattggaacaaaattacgccgctttatgtttgtcattagtcagatttgctaatcagggt
gatcaacaattcctcatcgttggtgtagcaaaggactatcagcttaatcctagagtgagc
aacggcgggtttttatacacctataaagtaaacatagactgtacaaaccttgaacttatg
cataaaactgtgatggacgaggttcctctggcaatttgttcttaccaaggacgagtcctg
gtcggagttggaaggatgttgcgtctgtatgacatgggcaagaaaaaacttcttcgaaaa
tgtgaaaacaagcacattccaaatgccgtggtatcaataaacgccgtaggtcaacgtata
tacgttagcgacgttcaggaatccgtatatgcagttagatacaagcgacaagaaaatcaa
ctaatcgtatttgctgacgatacgcatccgcgatgggtcacgacaacttgcgttcttgac
tacgatactgtcgcaacggctgataaatttgggaacattgctgtgattcgcttagcttca
ggaataaatgatgacgtcgacgaggatccaaccggaaataaagcactttgggatcgcgga
ctgctgaacggagcaagtcaaaaagccgataccgtggcgtgtttccacataggagagact
gtgatgtcattacaaaaggctacgttgatacctggaggttctgaaagtttggtgtacacg
acgttgagtggaacagttggcgtcctcgtgccattcacgagtcacgaagaccacgacttt
tttcaacatttggaaatgcatatgagatcggaacatccgccgctctgtggtcgcgaccat
ctttcatttcgatcttattattatcctgtcaaaaatgtaatcgacggtgatctttgcgaa
cagttcaattcgattgaaccaaccaaacagaagggtatatcgggtgatctggaaagaacg
ccctctgaggtctcaaaaaaacttgaggacgtcagaactcgatacgccttctaa
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