Neodiprion fabricii: 124179133
Help
Entry
124179133 CDS
T08986
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124179133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfb03041
]
124179133
03009 Ribosome biogenesis [BR:
nfb03009
]
124179133
Enzymes [BR:
nfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124179133
Spliceosome [BR:
nfb03041
]
Complex A
U1 snRNP components
U1 related factors
124179133
Complex B
124179133
Ribosome biogenesis [BR:
nfb03009
]
Eukaryotic type
Pre-60S particles
Helicases
124179133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Late_protein_L2
Motif
Other DBs
NCBI-GeneID:
124179133
NCBI-ProteinID:
XP_046419223
LinkDB
All DBs
Position
3:20103285..20110790
Genome browser
AA seq
543 aa
AA seq
DB search
MTYGGSSGGYRSSGGRGGSSQRSGYGSSSGGGSGGSSGRFSSRGGGGGSRGGRGGGGGGS
LRKPNWDYENLKPFKKDFYVPHVNVQNRHPREVEAYRADKQITLKGDALPNPIQFFEEGN
FPDYVMTGIRKQGFSEPTAIQAQGWPIAMSGRNMVGIAQTGSGKTLGYILPAIVHINNQQ
PLNRGDGPIALILAPTRELAQQIQTVASDFGSLSYVRNTCIFGGAPKGGQARDLERGVEI
CIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA
TWPKEVRNLAEEYLTDYTQLNIGSLTLSANHNILQIIDVCQEHEKETKLGSLLQEIGNVN
DDGGKTIIFVETKKKVENITRSIRRYGWPAVCMHGDKSQQERDYVLREFRNKKGSILVAT
DVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRSQSTGTSYAFFTPQNSRQAKDLVN
VLQEANQVINPKLTEMASRGGGGGGYGGRNRWGYGGGRGRENNFSGSHKRFDSGRSNGYG
SYN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacttacggaggatcttcaggtggataccgtagtagcggaggccgtgggggaagcagt
cagagatctggttatggcagcagtagcggcggtggaagtggaggtagtagtgggcgtttc
agtagccgtggaggtggtggcggaagtcgtggaggtcgcggcggcggtggagggggcagt
ttaagaaagccaaactgggactacgaaaacctgaagccattcaagaaagacttttatgtg
ccacatgtaaatgtgcagaaccgtcacccacgcgaagttgaagcttatagagcagataag
cagatcacactgaaaggcgatgctctgccgaaccccatccaattctttgaggagggtaat
ttcccagattatgtcatgactggaatcaggaaacagggattttccgagccaactgccatt
caagctcagggctggcctattgctatgtctggacgcaatatggtaggcattgctcaaacg
ggatcaggaaaaactcttggatacattttgcctgctattgttcatatcaacaatcagcag
cccctaaatcgaggcgatggaccaattgcgctgatcctcgcaccaaccagagaacttgcc
cagcaaattcaaactgtcgcaagcgactttgggtctctttcttatgttcgaaacacctgc
atctttggtggggcacccaagggaggccaggcgagagatctagagcgtggagttgagatc
tgtattgctactccaggtcgattgatcgattttcttgagagaggaactacgaatctacgc
agatgcacttacttggtgttagacgaagctgacagaatgcttgacatgggttttgaacct
cagatcagaaaaatcattgaacagatcagaccagacaggcaggttcttatgtggtcagcc
acatggccaaaagaagtgcgcaaccttgctgaagaatatctcaccgactacacacagctg
aacatcggatccctcactctatctgctaaccacaatattctacaaataattgacgtatgt
caggagcatgaaaaggaaaccaaattgggtagcttgttacaagagatcggcaatgtcaac
gacgacggtggaaaaaccatcattttcgtagagactaaaaagaaagtagaaaatatcacc
agaagcattcgccgctatggatggccagcagtttgcatgcatggtgacaaatctcaacaa
gaacgtgattatgttctcagagaattccgaaacaagaaggggtccatactcgtagcaaca
gacgttgctgctcgtggtctagatgttgacgacgttaagtacgtgatcaatttcgactac
ccgtcatcttctgaagactacattcatagaatcggcagaactggacgttctcaaagcaca
ggcaccagctacgccttcttcacaccacaaaacagccgacaggctaaagacttggtcaac
gttctccaagaagccaaccaagtcataaatcccaaactcaccgagatggcttcgcggggt
ggcggcggcggaggctatggaggaagaaatcgttggggctacggaggtggccgtggtaga
gaaaacaatttttctggatcacacaaacgatttgattccggtcgcagtaacggatacgga
agttataattga
DBGET
integrated database retrieval system
