Neodiprion fabricii: 124179331
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Entry
124179331 CDS
T08986
Name
(RefSeq) protein SMG8 isoform X1
KO
K18734
protein SMG8
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124179331
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124179331
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Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
124179331
NCBI-ProteinID:
XP_046419528
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Position
4:40641482..40648013
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AA seq
929 aa
AA seq
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MRPQKFKLPFNTDSLPNAERKVVVVSVFGKSHFRAKACKTEMLSSILQTSLLDDPTVDED
DLCEIEGYHDAKDRVVYLHVRGLLDTHTLINAYDQFIDKSDSKDFLTAWAHMREKYSRAL
LVLFHVSHVLILTHPTHSFDYSYVHLFRALDVVRQKTSGQVGEILSGIPGLPKDWATNAR
PCSPRVLFYFETCPSSFRDSEGGNIKKLEHSLEDQIYHILRKNRIVTNISTNSLFAIPAN
QEFVYVHTGPTESRDILGHMVRKLIQSCKVSSGGDTSRSLASVDSLFLSNDLEDETHTFK
SFLQQHISLAFAKGFDDNVGRLAAPTHFQIPTLSLFFEVVNKLMDFFVKRMDRETSTLHH
LLDTDVKFSKSRCSKVLPRALQTYQDGLPQHYTRAYHETKLAHAMAVFEMHARGPLFEEF
SEKLQQECDKHWRAGKQMCEVLSLTGNPCTNPIHKGGSEGAGGGEQVEPRDDDGDLPIME
HSSGVRYVCACNCGRCQGPREDPFSLRQANYDYFQLLAKQCGCSQLESIQFPVFQPSIHN
FRPAQLFPVTKRKDSFSRIELSTPQGQTQACSLGVNTLHDDVPVFGSGQSAPTSDLINDD
HQRLSNKASLTPGDTTDVPDAHNVVIEVCDVDLENNKEPEQLHCSTPEVSDAEASEKSLV
RQPSTTEYLPGMLHTESPVGLLPQFSSWSLVCLGPSSLYSHNLGLQHQTGVLATSAFLLP
WDVTVRLEHQKERGSLWPMVGDNPSHSYNRGGKNFQNMNSIRGRKSKGGKEFVVKIFVGV
EYECPRGHRFMASAPDKVLKATGTGIVKDSGNKVTSSTADMPLYFPCPCRQTKPLMAQLM
RIHVVTPKAPVHVTLNPRVQPGPPPCPIFVTGCEEPIKLSQSAYWVLRLPYVYMGEKGPY
LAPKEPVPIAHGRLLAGMYGISEVVPEKK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctcaaaaatttaaactcccatttaacacggacagcttaccaaatgcagagaga
aaagttgttgtcgtctctgtgtttggaaagtcacactttcgtgccaaagcatgcaaaact
gagatgctcagttctatcctacaaacgagtcttttggatgatcccacggtggacgaggac
gacttgtgcgaaatagaaggatatcatgatgcgaaagatcgtgtggtttacctgcacgtt
cgaggactcctagacacgcacacgttgatcaatgcctatgatcagttcatcgacaagagc
gacagcaaagatttcctaactgcttgggctcatatgcgagaaaaatactccagagctctg
ctcgtcctgttccacgtttctcatgtacttatacttactcaccctacccacagttttgat
tacagctatgttcacttgtttagagcgctggatgttgtcaggcagaagacctcaggacaa
gttggagaaattctaagtggaattccaggacttcctaaggattgggctacaaatgcgaga
ccatgttcaccgcgggtgcttttctactttgaaacctgtccttcgtcattccgggattca
gaaggtggcaacattaaaaagcttgaacattcgcttgaggatcaaatatatcatatatta
agaaaaaaccgaatagtcactaatattagcacaaactcgctgtttgcaatcccagcgaat
caggaatttgtttatgttcacacggggccgactgagtccagagacatcctgggtcacatg
gtcaggaagctaattcaaagctgcaaagtaagctcaggtggcgacacttccagaagctta
gccagcgtggattctctattcttatcgaatgacttagaagatgaaacacataccttcaag
tcgttccttcagcagcacataagcttagcttttgcgaaaggttttgacgacaacgtgggg
cggcttgcagcacctactcatttccaaataccaacgctgtctctcttctttgaagttgtg
aataagctcatggatttctttgtcaagagaatggacagagaaacttcaacactccatcac
ttacttgacactgatgtaaagtttagtaagagcaggtgcagcaaggttctgccaagagca
cttcaaacatatcaagacggtcttccacaacactacaccagagcatatcacgaaactaaa
ctagcacatgccatggcagtatttgagatgcatgcacgtggcccactgtttgaagagttc
agtgaaaaactgcagcaagaatgtgacaaacactggcgggcaggcaaacaaatgtgcgag
gtgctttcattgactgggaatccttgcacaaatccaatccataaaggtggcagtgaaggg
gcaggaggtggagaacaagtagagcctagggatgatgatggcgatctaccaataatggag
catagcagtggcgtaagatacgtgtgtgcttgcaactgtggcagatgccaagggccaaga
gaggatccattcagcttaagacaggccaactatgattattttcaattattggccaaacag
tgtggatgttcgcaactagaaagcatacaatttccagtctttcagcccagcatacacaat
ttcagaccagcacaactatttcctgttacaaagcgaaaagactcattttctcgtattgag
ctgtcgactccacaggggcaaacgcaagcttgtagccttggtgtaaatacactgcatgat
gacgttccagtgtttggcagtggacagtcagcgcctacaagcgatttaataaacgatgat
catcagaggctcagcaacaaagctagtctcactccgggcgacacaactgatgtcccagat
gcccacaatgtggttatcgaagtgtgtgatgtagacctagaaaacaacaaagaacctgaa
cagttacattgttcaacgcctgaggttagcgacgccgaagcatcagaaaagtcgcttgtt
cgacagccatcgacgacagagtatctaccaggtatgctgcatacagaatcccctgttggt
ctcctgccgcaattctccagctggtcactagtctgccttgggcctagcagtctttactcg
cacaaccttggactgcagcatcagaccggcgtattagcgacgtcagcatttttactaccc
tgggatgtgacggtcagactagagcaccagaaggagagaggatctctgtggccaatggtt
ggcgacaatccaagtcacagctacaatcggggaggtaaaaattttcaaaatatgaattcg
atacgcggccgtaaatctaaagggggcaaggaatttgttgtcaaaatatttgtcggcgtt
gaatacgagtgtccacgaggccacaggtttatggcatctgctcctgataaagtcctgaag
gccactggaactggcattgtcaaggacagcgggaacaaagttacatccagcacggcagat
atgcctctatactttccgtgtccctgcaggcaaacaaagccgctaatggcacagttgatg
agaatacatgttgtaacgcccaaggccccggtccatgtcaccttgaatccacgggttcaa
ccaggtccccccccttgtccgattttcgtcactggttgcgaggaaccaataaagttatcg
cagagcgcctactgggtcctcagacttccatatgtttacatgggcgaaaaggggccttat
ttggctccgaaagaaccagtacctatagcccatggcagacttttagctggaatgtacgga
atcagtgaagttgttccagaaaagaaatga
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