Neodiprion fabricii: 124180231
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Entry
124180231 CDS
T08986
Name
(RefSeq) DEAD-box helicase Dbp80 isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03013
Nucleocytoplasmic transport
nfb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124180231
03015 mRNA surveillance pathway
124180231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124180231
Enzymes [BR:
nfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124180231
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124180231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
124180231
NCBI-ProteinID:
XP_046421438
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All DBs
Position
4:complement(41259572..41264587)
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AA seq
475 aa
AA seq
DB search
MASPKVDWAKYTDEQESLASKVTNLGISQPTTTPQDGSESSKSDETEDQISPAEKSLLQK
IIRKGLVETTKDLEIQRKDPTSPLYSIKTFEALHLKPALLKGVYAMGFNAPSKIQETALP
TLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDPNKDYPQVLCLSPTYELAIQTGEVAAK
MSQFCPEIKLKYAVRGEEIARGTKITDHIIIGTPGKVLDWAIKFRFFDLRKISVFVLDEA
DVMIATQGHQDQCIRIHKLLPRTCQMMFFSATYETAVMEFAEIIVSNPLIIRLLKEEESL
DNIKQYYVKCKNMDEKYTAITNIYGVITIGQAIIFCHTRKTAGWLAEKMSKDGHAVAVLS
GDLTVEQRIAVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPIDQDRQADCATYL
HRIGRTGRFGKSGIAINLVDSSHAMQVCQDIEKHFGKKIHYLDAEDAEEIEKIGA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccgaaagtggattgggccaaatataccgacgagcaagaaagccttgcctcc
aaggtgacaaatttgggtatatcccagcctactacaacaccacaggatggaagcgaatcg
tcgaaaagcgatgaaaccgaggatcagatatcaccagcagaaaaatcactgctgcagaag
attatcagaaaagggctggttgagaccaccaaggatctagagattcaacgaaaagatccc
acatcccctttgtacagcattaagaccttcgaagcactccatttgaagccagcactcttg
aaaggagtttacgcaatggggttcaacgcgccttcaaaaattcaggagactgctcttcca
acactacttgcagacccaccacaaaacatgattgcgcaatcacagtctggtaccggcaag
actgcagcctttgttctagctatgctaagccgagtagaccccaacaaggactatccccaa
gttctctgtctatcacctacgtatgaattagccattcaaactggcgaagttgcagcaaaa
atgtctcaattttgtccagaaattaagctgaaatatgctgttcgaggagaagaaattgct
cgaggtacgaaaatcaccgaccatataataattggaactccgggaaaagttctggattgg
gctataaagttcagatttttcgacctgagaaaaatctcggtctttgttttggacgaggca
gatgtaatgattgccactcaaggacaccaggatcaatgcatccggatccacaagttgctg
cctcgcacttgtcagatgatgtttttctctgcgacgtatgaaacggcagtgatggaattt
gctgagataatcgtgagcaatccgttgataatacgtttgctgaaagaggaggaaagtttg
gacaacatcaaacagtactacgtcaagtgcaagaacatggacgaaaagtacacagctatc
accaatatttatggcgtgatcaccattggacaagctatcattttctgtcacacgagaaaa
acagccggctggctagcagaaaagatgagtaaagatggtcacgctgtggcagttttatct
ggtgacctgactgtcgagcaacgcattgctgttttagacaggtttcgagcgggtcttgaa
aaggttctcatcaccacaaatgtcttggctagaggaattgatgttgagcaagtaacaatc
gttgtgaacttcgacctaccaattgaccaagaccgccaagcagattgtgcaacttatcta
cacaggatcgggcgcacgggcagattcggaaaatctggtatcgccattaatctagtggat
tcatcgcacgcgatgcaagtctgtcaagatatagagaaacactttggaaaaaagatacac
tatttggatgcagaagatgcggaggaaattgaaaaaatcggtgcataa
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