KEGG   Neodiprion fabricii: 124180518
Entry
124180518         CDS       T08986                                 
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
nfb  Neodiprion fabricii
Pathway
nfb03420  Nucleotide excision repair
nfb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:nfb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    124180518
   03460 Fanconi anemia pathway
    124180518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nfb03032]
    124180518
   03400 DNA repair and recombination proteins [BR:nfb03400]
    124180518
DNA replication proteins [BR:nfb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    124180518
DNA repair and recombination proteins [BR:nfb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124180518
SSDB
Motif
Pfam: ERCC4 HHH_5
Other DBs
NCBI-GeneID: 124180518
NCBI-ProteinID: XP_046422101
LinkDB
Position
4:20066164..20070691
AA seq 865 aa
MLEYENQMFLDILHDDGLVVCAKGLGIETVFINILKVYLDPGNLVIVLGTSDHEECYFIN
RLENMGVKFLPRVITAQFPANERELMYLDGGVLFISGRIFVVDLLKNRVPLKLVTGILVY
RAHNILNSFQEAFALRLYRQNNKTGFIKAFTNSALAFTVGFAQVERVMKSLFVKQLYLWP
RFHALVSNSLSKSKPEVIEIHAKLTPKMLNIQIALLDVMNYTVNELKRINKYLELEELTV
ENVIAKKFHKLLQHQLDPIWHQLSFKTKQLVADLKTLRSLLVSLNHEDSVSFYATLNRLR
TAEYAMNSSGWLLLDCVENLFISGKRRVYNEKDELKPEASPKWIALSEILREIQDDIDTN
KTDPDELRKVLVLVQDKITCNQLKGYLTMGAGEYLLYRAMSKLQPSKISKPNDQNTDAFP
ASNLPPSSEANESTEDTVEKDSYVLTLSQKPSSADCAEQFEECSQLDELDLSTISKVAPL
VVIQSLKKNGDPMALLQTLSEMMPSYVILYSADISAVRQLEVYQSNNPSIKLKVFFLIYG
GSAEEQAYLTSLRREKESFNMLINTKATMVVPEDQDGKTDDCQTLVRGTSGPVPDAENTR
KGGVQEDVPRLVEKIIVDMREFRSELPALIHKRGIEIEPVTLLIGDYILSPEICIERKSI
SDLIGSLNSGRLYNQAVAMTRHYAKPMLLIEFDPNKPFCFQNNYFLSADTKSSEVTAKLQ
LLTLHFPKLKLIWSPSPSATSQLFEELKKDRAQPDALKAAQIGVEENVDEEFIVDKYNKI
QDLVSKLPGVNSKNMRALLNKGESLDHLITLSQAELAEILGNSGDAQLLYDALHKRNALK
EEQSASRSGRGGSKVRGRGLFRKKK
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgttggaatacgagaatcaaatgttcttggacatactccatgatgatggtctagttgtt
tgtgccaaggggctcggaattgagactgttttcataaacatactgaaagtctacttggat
cccggtaatttggttattgtgctcggcacaagtgaccatgaagaatgctacttcatcaac
agactagaaaacatgggtgtgaaatttttgcctcgtgtcatcacagctcagttcccggct
aacgagagggagttgatgtatctagatggcggtgttctctttatttcgggtagaatattc
gtggttgacctgttgaaaaatcgtgtgccattgaagttggtgaccggaatactggtttac
agagcccacaatatactaaattcgtttcaggaagccttcgcccttcgcttgtacaggcaa
aacaataagactggatttatcaaggcattcacaaattctgcattggcattcactgtagga
tttgctcaagttgaaagagtgatgaaaagtttattcgtcaaacagctgtacctttggcct
cgttttcacgcgctcgttagcaacagtctatcaaaatcaaagccagaagtaattgaaatt
catgcaaaactcacaccaaagatgttaaatatacaaattgcgcttttggatgtcatgaac
tacactgttaacgaattgaagaggattaacaaatatttagaactggaggagctcacggtt
gaaaatgtaatcgcaaaaaaatttcacaagctcctacagcatcagctggacccgatatgg
catcaacttagctttaaaaccaaacaacttgttgccgatctcaaaaccttacgatcgctt
cttgtgtccttgaatcatgaggattccgtatctttttacgcgactttgaatcgcctacgc
actgcagaatatgcaatgaatagtagcggttggttgctactagattgcgttgaaaatctg
ttcatatcaggaaagcggagggtttacaatgaaaaagatgaattgaaaccggaagcgagt
cctaaatggatcgcactgtcagaaattctacgcgaaattcaagacgatattgacacgaat
aaaactgatccggatgagctgcgaaaggtcctagttttggttcaggacaaaatcacgtgc
aaccaactgaaaggatacctgacgatgggcgcaggggaatacttactctacagagcgatg
tcaaaactacaaccgagcaaaatatcaaaaccaaatgatcaaaatacagatgctttccct
gcatccaatcttccaccctcgtccgaagcgaacgaatccactgaggatactgtggaaaaa
gatagttacgtactaactctctcacagaagccatcaagcgctgattgcgctgagcagttt
gaagagtgttcacagctcgacgaattggatctgtctacaatatcgaaagttgcaccgctg
gtcgttatacaatcattgaaaaaaaatggcgatccaatggcactgcttcaaacactgtcc
gaaatgatgccaagctatgtgattctgtattctgctgatatatctgccgtcagacagcta
gaggtataccaaagtaataatccttccattaagctaaaagtttttttcttgatttacggc
ggttcagcagaggaacaagcatatctaacgtcattgcgcagggaaaaggagtccttcaat
atgctcatcaatacaaaagctacaatggttgtgcctgaggatcaagacggcaagactgac
gactgccagacattggtgagaggcaccagtggcccggtaccagatgccgagaatacacgc
aaaggcggtgttcaagaagatgttcctagattggtggagaaaataattgtagacatgaga
gaattcaggagcgaattacccgcgctcatacacaaaaggggaatagagattgagccagtc
acccttttaatcggcgactacattttatcaccagaaatttgcattgagagaaagagtata
tctgatttaattggctcactaaactctggaaggctatataatcaagcagtcgctatgact
cgtcactatgccaagcccatgctacttatagagtttgatccgaacaagccattttgcttc
cagaacaactattttctcagcgcggatacaaaaagcagcgaagttacagcgaaacttcaa
ttgctcactctgcattttccaaagttaaaactgatttggtcccccagtccaagcgccacg
tcacaattattcgaagagcttaagaaggacagagctcagccggacgcgttaaaggcggca
caaattggagtagaagaaaacgtagacgaagaattcattgttgataaatataacaagatt
caagatcttgtgtcgaaactcccaggggtcaactcgaagaacatgagagcattgctgaat
aaaggagaatcgctggatcatcttatcacactgtctcaggctgagttggctgaaatacta
ggtaatagcggagatgctcaacttttgtacgatgcattacacaagaggaacgcattgaag
gaagaacagtccgccagtcgaagtggtcgaggcggatcaaaagttcgagggaggggatta
tttcgtaaaaagaaatag

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