Neodiprion fabricii: 124180831
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Entry
124180831 CDS
T08986
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124180831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfb03036
]
124180831
Chromosome and associated proteins [BR:
nfb03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
124180831
INO80 complex (yeast)
124180831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
124180831
NCBI-ProteinID:
XP_046422632
LinkDB
All DBs
Position
4:complement(27473854..27511074)
Genome browser
AA seq
1609 aa
AA seq
DB search
MINSHSYCSRTFKENQSLQIPVMSEEVHTMGLEAEIAPPLHLQRLERSLNVQPFLNEINE
LFQDRVSDDDKTDDSDSSDESEDYLNDVVSRKEDERIDKLRLYNMSSVGEERRWLQDILL
SDSSDSSVSESDTDGPITEEDFQDMLKFHILRKKYQGRFYQKPENIQYQYYGAGLLSSYD
KFPEHQKLIIGNKKKKEKKPEKRVMKFKKEKTVRHRATNEYKEHDYPEDDWERVVPKEDE
LDEAEIDALIQHQPRQRCRKKHNNKSPEVMAIRRRKIWIMMSKKELGKVQRAKTNNHKEM
LISCKKVAQHCMKYCRQKAMQSQKNMKETIWRAKRLTREMQSYWKRYDRVERETRRRLEK
EAEEQRKMDVELIEAKRQQRKLNFLITQTELYAHFMSRKLGKASPEEQLRILNQLDEEKN
PRLIGLDDYDCELMKHKAKKNAVEAFDSERARTRQFDTAAAAQELRLSETPETLEHPQPA
IFQGNLKGYQMKGMNWLANLYDQGISGILADEMGLGKTVQSIAFLCHVAEKYSVWGPFLI
ISPASTLHNWQQEMARFVPDFKVVPYWGNPQERKILRQFWETKDLHTKEASFHVVITSYQ
LVITDYKYFNRIKWQYMILDEAQAIKSTSSMRWKLLLGFSCRNRLLLSGTPIQNSMAELW
ALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKHLSRLHMILKPFMLRRIKKDVE
NELSDKIEIMVYCPLTTRQKLLYMALKKKIRIEDLLHYTVGGADAVPNDKNFTSNLMNLV
MQFRKVCNHPELFERRDAKSPLFLNVESYEMPALVYNEGLVNTSLLSKAHLLFNKLCIFA
TEYIHRSLHQETENPTHTCFSFTRFIGLSPMELNKIFVAGILFRWAYTVAMKNKTQVKRY
WEDWWVDDKRIPPTNLTILVSSKLDTNSNVIDDLIFTKDISRGEAFYTHATHSIHSMSET
IAHRILRSSKQLSSQLIKWPLVSLKTEYGEDTKLPLLPEHPHKPRSPITRPLQRTTLPAF
VCDNNPKIQASPRKLYVSSSSAASAWRRHEECGGVIGQRMLWLGCERALLCPPHSMSMGS
RIAVPSTFSYNPPGGLLACTPINGWSNIIIPDKQTLVTDAGKLSVLDSLLRRLKEQGHRV
LIYSQMTKMIDLLEEYMYYRKHTFMRLDGSSKISDRRDMVADFQKRADIFVFLLSTRAGG
LGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRARE
KSEIQRMVISGGNFKPDTLKPKEVVSLLLDDEEIEAKYSQRSEERKQHMEEIRHTEPTSH
KEKDRKRKLASLPVKNDSKRSHLEDGVIVDEASDIFDDSAPASPARSEVSQGSAYIPQDD
TSNEGLVVDVDGPVSTPVHHPQVHATLPTPGPIEPPKVSRLTHHFTFAGSVGSRVRPAGR
GTNKRGRPRGSRRGGPIGGKGRGLLLLQPPASQSSTVPQGDAAANLTSVQSPHGSSVPVP
ADGDGPSSVGPLGPVAPLMTRGGGATVRRGPGRPRLRPTGPGNQGYRGHGTHHHAKRAQR
PLPVPLRSHQLAALPPRTSAPSSSQTPTSSESRPFGFYTQHQRTPPRGS
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgatcaattctcatagttattgttcacgtacattcaaagagaatcaatctttgcaaata
ccggtaatgagtgaagaggtccacacaatggggttggaagctgaaatcgccccgccgtta
catctgcagcgactagagcgcagtctaaatgttcaaccttttttaaacgaaatcaacgaa
ttgtttcaagatcgcgttagtgatgatgataaaacggatgactcagactcatcagatgaa
tctgaagattacctcaacgatgtagtctcgcgtaaagaagatgaaagaatcgacaaactt
cgcttatataatatgagcagtgttggcgaagagcgaagatggctgcaggacattttactt
agcgactcatcagacagttctgtgtctgaatcggatacagatggtccgattacggaagaa
gattttcaggatatgttaaaatttcacatattgcgtaaaaaatatcagggtcggttttac
cagaagcctgagaatatacaatatcagtattatggtgctggtttgttgtcgagctacgat
aaatttccagagcatcagaaactcattattggcaataaaaagaaaaaagagaaaaaaccg
gaaaagagggttatgaagttcaaaaaggagaaaactgttcgtcacagggcgacaaacgaa
tataaagaacatgattatccagaagatgattgggagcgtgtagtaccgaaagaggatgaa
ttggacgaagctgaaattgatgcactgattcaacatcagccgcgacaacgatgtagaaaa
aaacacaataacaaaagtccagaggtaatggcaattaggagaagaaaaatttggataatg
atgtcgaaaaaagaattgggaaaagttcaaagagcgaaaacgaataatcataaagaaatg
ttaatcagttgtaaaaaggttgctcagcactgtatgaaatactgcagacaaaaagccatg
caaagccagaaaaacatgaaggaaacgatatggcgtgctaaaagattgactagagaaatg
cagtcttattggaaacgttatgatcgtgtcgaaagagagactagacggagattagaaaag
gaggccgaagagcagcgtaaaatggatgtggaactgattgaggctaagcggcaacaaaga
aagctgaattttttaattacgcaaacggaactgtacgctcactttatgtcacgaaaatta
ggaaaggcatcaccggaagaacaattgcgaattctcaatcaattagacgaagaaaaaaat
cccaggctcataggacttgacgattatgactgtgaactgatgaaacacaaggcgaagaag
aacgcagtcgaagcatttgacagtgagagggcgcgcacccgccaatttgataccgcagca
gccgcgcaagaacttcgtttgagtgagacacctgaaactctcgaacatccgcagcccgcc
atatttcaaggcaatctaaaaggctaccaaatgaagggcatgaattggctcgctaattta
tatgatcagggaattagcggtatcttggctgacgagatgggtcttggaaaaaccgttcaa
tcgatagcattcttgtgtcacgtcgccgaaaagtactctgtctggggcccatttttaata
atatctccagcttcgactctgcacaattggcagcaggagatggcgaggtttgttccagat
tttaaggtagtaccttactggggtaatccgcaggaacgtaaaatcctaagacaattttgg
gagaccaaagatctgcacacgaaagaagcgtcctttcacgttgttatcacaagttatcaa
ttggtcatcactgattacaaatacttcaatagaataaagtggcaatatatgattctggat
gaagctcaggctattaaaagcacaagcagtatgaggtggaagcttctgcttggattcagt
tgtcgtaatagactgctgctgagtggtacgccaatccagaacagcatggccgaattgtgg
gccttacttcactttataatgccaaccctatttgattctcatgacgaattcaacgaatgg
ttttctaaggacattgaaagtcatgcagaaaataaaactgggattgatgaaaagcattta
tcgagattgcatatgatcctgaaaccattcatgctgaggagaataaaaaaagacgtcgag
aatgagctctctgataaaattgaaatcatggtttactgtccacttacgactcgacagaaa
ttgctttacatggccttgaagaagaaaatcaggatagaggacttgttgcattacacggtc
ggtggagcagacgcagtaccaaacgacaagaattttacatcaaatttaatgaatttagtg
atgcaatttcgcaaagtctgcaatcatccggaattgttcgaacgaagagacgcgaagtcc
ccgttatttctgaacgtggaaagctatgaaatgccagcacttgtgtacaacgagggattg
gtaaatacatcattgctgtcgaaagctcatttgctcttcaacaagctgtgcatatttgca
acagagtacatacatcggtcgcttcatcaggaaactgaaaatccaacccatacttgtttt
tcgttcacaagatttatcggcctgtctcctatggagctcaacaagattttcgtagccggt
atactattcagatgggcttacacagtggcaatgaaaaataaaactcaggtcaaacggtat
tgggaagattggtgggttgatgacaaaagaataccaccaaccaatcttacgatacttgtc
agttcaaaattagataccaattccaatgtcatagacgatttgatcttcacaaaagacatc
tccagaggggaggctttttatacacatgctacgcacagtattcactctatgtcagagact
attgctcatcgaatactacgtagcagtaagcagctctcaagccaactcattaagtggccg
ttggtgtccttgaagacagaatatggcgaggataccaagctgccgctcttgccagaacat
cctcataaacctagatcacccataacaagaccccttcaacgtactacgttacctgctttt
gtctgtgataataatcctaagatacaagctagtccaagaaaattatatgtaagtagtagc
agcgcagcgtctgcgtggcgacgccatgaggaatgtggcggtgtaataggtcagcgcatg
ctgtggcttggctgcgagcgagctctcctctgtcctccgcatagcatgtccatgggctct
cgcatagcggtccccagtaccttctcctacaaccctccaggtggcttgttggcctgcact
ccaataaatgggtggtcaaatatcatcatacctgataaacaaaccctcgtcaccgatgct
gggaaactctccgttttagacagccttttacggcgactcaaggagcagggtcaccgtgtt
ctcatctattcccagatgacaaagatgatcgatcttctcgaggaatacatgtattataga
aaacacactttcatgcgactggatggatcgtcgaagatatctgaccgcagagacatggtt
gccgactttcaaaaacgggctgacatatttgtcttcttgctcagcaccagggctggcggt
ttaggaatcaatctcacggccgcggatacggttatattctacgacagtgattggaaccct
accgtcgatcagcaggccatggacagggctcacagacttggtcagacgaagcaggtcacc
gtttatcggctcatttgcaaggggaccatagaggaacgcatccttcaacgggccagggag
aagagcgagattcaacgcatggtaatcagcggtggtaatttcaaaccggacaccctgaag
ccgaaggaagttgtctctctgctactcgacgacgaggaaatagaagcgaaatatagccaa
cggagcgaagagcgtaagcagcacatggaagagatacggcacactgagccgacgagccac
aaggagaaggaccggaaaaggaagctagcctcgcttccggtcaagaatgactcgaagaga
tcccaccttgaggacggagtaatcgtcgatgaagcctccgatatcttcgacgacagtgca
cccgctagtccagctagatcagaggtgtctcagggcagcgcttacatccctcaggacgac
acgagcaacgaaggactcgtcgtcgatgtcgacggacccgtctcgacgcccgtccatcac
ccccaagtccacgccaccctcccgacgcccgggccgatcgaaccccctaaggtgtcgcga
ctcacccaccacttcaccttcgccggctcggtcggatctcgggtccgtcccgccggacga
ggaaccaacaaacggggtcgtccccggggctcccggaggggtggacccatcgggggcaaa
ggacggggtctcctgctcctgcaaccccccgcgagccagtcgtcgactgtgccccagggg
gacgcggcggcgaacctgacgtctgtccaatcgccgcacggaagctcagttcccgttccg
gcagacggcgacggtcccagcagcgtcggtccgttgggtccggtcgctcctctgatgact
cgaggaggaggtgcgacggttcggcgtggtcctggaaggccgcgcctgaggccaacgggt
cccggaaaccagggataccggggtcacgggactcaccaccacgccaagagggcccaaagg
cctcttccggtacctcttcgttcgcaccagctcgcggcgttaccccctcggacttcggcg
ccatcctcgtcgcaaacaccgacctcctcggagtcgcggcccttcgggttctacacgcaa
caccaacggaccccaccacgtggctcatag
DBGET
integrated database retrieval system
