Neodiprion fabricii: 124181089
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Entry
124181089 CDS
T08986
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03440
Homologous recombination
nfb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124181089
03460 Fanconi anemia pathway
124181089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfb03032
]
124181089
03400 DNA repair and recombination proteins [BR:
nfb03400
]
124181089
Enzymes [BR:
nfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
124181089
DNA replication proteins [BR:
nfb03032
]
Eukaryotic type
DNA Topoisomerases
124181089
DNA repair and recombination proteins [BR:
nfb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
124181089
FA (Fanconi anemia) pathway
124181089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
124181089
NCBI-ProteinID:
XP_046423238
LinkDB
All DBs
Position
4:2632204..2636969
Genome browser
AA seq
1048 aa
AA seq
DB search
MKFTSKITKIKVKKYLFIDLRTTWIQLAKFSSSDTVKELYNSGKNVMKVLNVAEKNDAAK
GIAGYLSHGSSHRREGLSVYNKIYEFDTQLWGQQCKMIMTSVSGHLLNHEFVGGYRNWQG
CNPLSLFEAPVVKQCEENFMKIKKTLEREAKGCQALIIWTDCDREGENIGFEVIQVCQAV
KPTIKIYRAKFSEITAPSVTRALHNLGLPNKAISDAVDVRSELDLRIGAAFTRFQTMRLQ
KVFPQTLAEMLISYGSCQFPTLGFVVERFLAIENFKSEPFWKIKVTDERDGILVEFRWDR
NRLFERLPCQIFLDICLESPTATVEKVTCKPKSKWRPLPLDTVELAKLGSRKLKLNAKET
MKIAEKLYTQGIISYPRTETNIFPKELNLVPLVEHQSASPQWGPFAQQILQNGPFPRQGK
KNDGAHPPIHPTKYIATLGGNEARVYEFIVRHFLACISKDAEGQETIVHIDIAQEKFIAS
GLHIIAKNYLEVYPYETWNAKEIHAYEEGQTFRPTGIEMVDGETSPPNLLTEADLIALMD
KHGIGTDATHAEHIEKIKSRQYVGLKDQKYFIPGKLGIGLVMGYDSMGFHMSKPHLRAGL
ENDLKLICDGVKQPADVLQDQISRYKTVFTATLRQAGLIDEALAHYLDEQPAQVQHAEIA
NPDPDIIVYKCPKCGSNMLLKDRRNSPGKYIGCMAFPTCNNSIWFPTTVENIEVLNNKCN
RCPGNMPLLKFTLRQGTLPHLGTSYTSCIGGCDTVLNETFDIRTHSVQNVPQAGNGGAPQ
TNSNQNPRTNQTRQNAQRQPNGQINNSRANDTSRTDSGVSTWSSAPSTTSVRHNKFSNRS
SNQNQQNMETDDTILCNCHERAIELTVRKEGTNKGRQFYKCAKPQENSCDFFLWAAENAL
PNDNANRNHSQPSRNTNSSYSNQTQQSQTNMRFDREAGGSSSSQGITCTCGQPARKLTVH
KEGPNKGREFYGCPQGIGTTCKFFKWADENDDDGSCDNGQRPHTGGFRGGRNIQNANLPR
ARNPSKRKCGLCGQEGHTRRTCSQNDAG
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacatcgaaaattacgaagataaaggttaagaaatatttgtttatagattta
agaactacatggattcaactggccaaatttagtagcagtgatactgtcaaagagctgtac
aatagcggtaaaaacgtcatgaaggtgttgaatgttgctgaaaaaaatgacgcagctaaa
ggtatagctggctacctttcacatgggtcttcgcatcggcgagaaggactatcagtatat
aacaagatctacgaatttgatacccagctatggggccagcagtgcaaaatgataatgacg
tcggtatctggtcacctgttgaatcatgaatttgtcggaggatatcgtaattggcaagga
tgtaatccactatctctatttgaagcacctgtggttaagcagtgcgaggagaattttatg
aaaataaaaaaaaccttagagagggaggctaagggttgccaggcactgattatatggaca
gattgcgatcgagagggtgaaaacataggctttgaagttatacaagtttgccaagctgtg
aagcccaccattaagatataccgagcaaaattttcggaaataactgctccatcggtgact
cgagcacttcataatttaggattaccgaacaaagccataagcgatgctgtcgacgttagg
agcgaattggacttgagaataggagctgcatttacacgatttcaaacaatgagacttcaa
aaggtttttccacaaacgctagctgagatgttgatcagctatggcagctgccagtttcca
accctgggttttgtagtagagaggtttctcgcaattgaaaatttcaagtcagagccattt
tggaaaatcaaagtcacggacgaacgtgatggaatattggtggaatttagatgggacaga
aatcgtttgtttgaacgccttccgtgccagatatttctggacatatgtttagaatctcct
actgcaactgtagaaaaagttacgtgcaaaccgaaaagcaaatggagaccgctgccattg
gacaccgtcgaattagccaaattgggttcacgcaagttgaaactaaacgcaaaggagaca
atgaaaatagcagagaaactgtacactcaaggtattatcagctaccctcgtacagaaact
aacatttttcccaaggaactcaatcttgtgccactagtcgaacatcaatctgcaagtcca
cagtggggaccgtttgcacaacaaatactgcaaaacgggcctttcccacgtcaagggaaa
aaaaatgatggagctcaccctccgattcatcctacgaagtacattgctactttaggaggc
aatgaggctcgtgtatacgagtttatagttcgtcattttttggcctgtatatcaaaggat
gctgaaggtcaagagaccattgttcacattgatattgcgcaggaaaaatttatagcaagt
ggtcttcatataattgccaaaaattatttagaagtgtacccgtacgaaacgtggaatgca
aaagaaatccatgcgtacgaagagggacaaactttcagacccactggcattgaaatggtt
gatggggaaacttcacctccaaacttgctaacagaagctgacctaattgctttaatggat
aagcacggaattggcactgatgcaactcacgctgaacatatcgagaaaataaaatcaagg
caatacgtgggcctgaaggatcaaaagtatttcattcccggaaaactcgggattggattg
gtcatgggctacgacagtatgggctttcatatgtccaaaccacacctcagagcaggactc
gaaaacgatttaaagctaatatgcgacggtgtgaaacagccagcggatgttttgcaggat
caaatatccaggtataaaacagtattcacagcaacgttacggcaggctggattaatagac
gaagcgcttgcacactatcttgacgagcaaccagcgcaggtgcagcatgctgaaatagca
aacccggatccagatataattgtatacaagtgtccaaagtgcgggagtaatatgttatta
aaggatcgaaggaactctcctggcaaatatattggctgcatggcgtttccgacatgtaat
aattcgatatggtttccaaccactgttgagaatatagaagttttgaataacaagtgtaac
aggtgtccaggtaatatgccattacttaagtttaccttgcgccaaggcaccctgccgcat
cttggaacttcttacacctcttgtataggaggatgtgatacagtgctcaatgagactttt
gatattcgaacacatagcgtacaaaatgtaccacaagctggtaatggtggagcaccgcaa
acaaactcaaatcaaaatcctagaacaaatcaaacacggcaaaacgcacaaaggcaacct
aatggccagataaataattctagagcaaatgacacaagccgtactgattctggggtgtct
acttggagctctgcaccttcgacgacttctgtacgacataataagttttctaatcggtct
agtaatcagaatcaacagaatatggaaactgatgacacgattctctgtaactgtcatgaa
agggcaatagagcttactgtacgtaaagaggggacaaataaaggaagacaattctacaaa
tgtgccaaaccgcaagaaaacagctgtgacttctttctctgggctgcagaaaatgcttta
cccaatgataatgcaaacagaaatcattcgcaaccatctcggaataccaatagcagctat
agtaatcaaacacagcagagccaaactaatatgaggttcgatagagaagctggcggatca
tcgtcatctcaaggcattacctgcacgtgtgggcaaccggcaagaaaacttaccgtacat
aaggaaggtcctaacaaaggaagagaattttatggatgccctcaaggaattggcactaca
tgtaaattttttaaatgggctgatgaaaatgatgatgatggttcatgcgataatggacag
agaccacacacagggggctttcgaggaggtagaaatatacaaaatgcaaatcttcctaga
gcaagaaatccaagtaaaaggaagtgcggtctttgcggacaagaaggtcataccagacgt
acctgttcacaaaatgatgcgggttaa
DBGET
integrated database retrieval system
