KEGG   Neodiprion fabricii: 124181403
Entry
124181403         CDS       T08986                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
nfb  Neodiprion fabricii
Pathway
nfb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nfb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    124181403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nfb03021]
    124181403
   03036 Chromosome and associated proteins [BR:nfb03036]
    124181403
Transcription machinery [BR:nfb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     124181403
   Coactivators
    SAGA/TFTC/STAGA complex
     124181403
Chromosome and associated proteins [BR:nfb03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     124181403
    STAGA complex
     124181403
    TFTC complex
     124181403
    SAGA complex
     124181403
    SLIK complex
     124181403
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I TFIID_NTD2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_TEP1_C NBCH_WD40 Beta-prop_RIG_2nd CFAP251_N Beta-prop_IFT140_1st Beta-prop_Vps41 DSE1_N Beta-prop_Nup120_160 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_VPS8 Tricorn_2nd Beta-prop_EIPR1 Beta-prop_WDR41 Ge1_WD40 ASA1 RMC1_N Beta-prop_DCAF12 Beta-prop_DCAF4 WD40_like TP_0598_N Cytochrom_D1 TRM82_WD Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_ELP1_1st PAC11 PD40 VMP1_C
Other DBs
NCBI-GeneID: 124181403
NCBI-ProteinID: XP_046423921
LinkDB
Position
4:8784988..8797362
AA seq 588 aa
MKRSKIDIINATVESYLKRRHYHQESDIFRKSERGDCQTSAAEMTLSTTVECSTSRENSI
VFSAITNDAGVADQAYHKLKIWIQTINNENLKIELQGVLYPIFCHLYLEMLHGGNRQTAI
QFLKMYQNDFVSDTERDFLEELSSVFSIQDIELRPLVNAFRTRKYKVDMSDDAHFCLQKF
LAKQGHVILMQVINTHVTIIRKIPEVHPDEDRSCERGPNRESVINGHVEQPSGTGVDREM
RELQEAIRLIRSNVHQPLRVYAINNANENASCGSITPNIDRLAAGFSTSEIRLWGISDTV
LTRPRLKAAPLNFASNNPSTSRSLWTEDHMDEAGAIVMRGHTDVVHDLKFIPEADVLLSV
SSDKDMRAWRLSDYSCAAIYNGHNYPVWCMDTSVFNLYIATGSHDRTAKLWSLDRTFPLR
IFAGHFLDVNCIRFHPNARYLATGSADKTIRLWSKDDGSLVRVYVGARSTIYSLAFSPDG
KYLAAAGDDKSVSIWDLATNTQLIELKGHQDTVMNLDWSSDGQYIASASIDGVVRLWSTQ
RHINTSNGDNTNSQSGQDNSQVYPTNCSSILSLQYYHKNDSLVCIGTS
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgaaacggtcgaaaattgacataatcaacgcgactgtcgaatcctacttaaaacggagg
cactatcatcaggagagtgacatttttcgtaaatctgaacgcggagattgtcaaaccagc
gccgccgaaatgactttaagcacgactgtcgagtgcagtacttctcgtgagaattcaatc
gtctttagcgctattacaaacgacgctggagtcgctgatcaagcatatcacaaattgaaa
atatggatccaaacaataaacaatgaaaacttgaagattgaactgcaaggagtattatat
ccgatattctgtcatttatatctggagatgttgcatggcggtaacagacagacagctatt
cagtttttaaaaatgtaccaaaatgactttgtctctgatactgaacgagactttttagaa
gaactatctagcgtattttctattcaagatatagaactcaggccattggttaatgcgttc
agaacaagaaaatataaggtcgatatgtcagacgatgctcacttctgtcttcaaaagttt
ctcgccaaacagggacatgttattttaatgcaggtaataaatacacatgtgacaatcatc
agaaaaataccagaagtacatccagatgaagatagaagttgtgaacgtggaccgaataga
gaatcggtgattaacggtcatgtagagcaaccttcgggcacaggtgtagatcgtgaaatg
cgtgaactccaagaagctattcgattgattcgtagtaacgttcatcaaccattgagggtc
tatgcaattaataatgccaatgaaaacgctagctgcggttcaattacgccgaacatagac
aggctagcagccggatttagcacttctgaaataagactgtggggcatctcagatacggta
cttacaaggccaagacttaaagcagcgccgcttaattttgcatctaacaatccatccacc
agtagaagtttatggaccgaggaccatatggatgaagcaggggcaattgtgatgcgaggg
catacagacgtggtacatgatttaaaattcattcccgaagctgatgttcttctatctgta
tctagtgacaaagatatgagagcatggcgactgagcgattattcctgtgcagctatatac
aacgggcataattatcctgtatggtgcatggataccagtgtatttaatttgtacatagca
actggttcgcacgatcgtactgccaaactttggtcgctagatcgaacttttccacttcgg
atatttgcgggtcactttctagatgttaattgcattagatttcatcccaatgcccgatat
ttagcaaccggttcagcagataaaacgataaggctatggagcaaagatgatggtagtttg
gttagagtttatgtcggcgctcgttcaacaatttacagtcttgcttttagtccagatgga
aagtatttagccgctgccggtgacgacaaaagtgtatctatatgggatttagcaacgaat
acccagttgattgagttaaagggtcaccaggatacagtaatgaatttggattggagttct
gatggccagtatattgctagtgccagtatagatggagtagtgcgactttggtccacccaa
cgacacataaatactagtaatggggacaacacaaactcacaatctggacaagacaattct
caagtatatccaacaaattgctcaagtattctatcgctacaatactaccacaagaatgac
tcacttgtttgtattggaacatcgtag

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