Neodiprion fabricii: 124181533
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Entry
124181533 CDS
T08986
Name
(RefSeq) heat shock protein 60A-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124181533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124181533
03110 Chaperones and folding catalysts [BR:
nfb03110
]
124181533
03029 Mitochondrial biogenesis [BR:
nfb03029
]
124181533
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfb04147
]
124181533
Enzymes [BR:
nfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
124181533
Messenger RNA biogenesis [BR:
nfb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
124181533
Chaperones and folding catalysts [BR:
nfb03110
]
Heat shock proteins
HSP60 / Chaperonin
124181533
Mitochondrial biogenesis [BR:
nfb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
124181533
Exosome [BR:
nfb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124181533
Exosomal proteins of other body fluids (saliva and urine)
124181533
Exosomal proteins of breast cancer cells
124181533
Exosomal proteins of colorectal cancer cells
124181533
Exosomal proteins of bladder cancer cells
124181533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MreB-like_C
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
124181533
NCBI-ProteinID:
XP_046424141
LinkDB
All DBs
Position
4:38739116..38742875
Genome browser
AA seq
572 aa
AA seq
DB search
MYRLPNMLRGVALRQLNFHSRSYAKDVRFGPEVRALMLQGVDILADAVAVTMGPKGRNVI
LEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAI
AKEGFEKISKGANPVEIRRGVMLAVEQVKEELKKLSKPVTTPEEIAQVATISANGDTAIG
NLISDAMKRVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDAL
VIFSEKKISSVQSIIPALELANSQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAP
GFGDNRKATLQDMAISTGGIVFGDDANLIKLEDVQMNDLGQVGEIVITKDDTLILKGKGK
KEDIDRRAEQIRDQIANTTSDYEKEKLQERLARLASGVAVLRVGGSSEVEVNEKKDRVHD
ALNATRAAVEEGIVPGGGTALLRCVPALLKMKANNSDQETGIKIVAHSLRMPCLQIAQNA
GVDGSVVVAKVSEGTLGYDALNNEYVDMIQKGIIDPTKVVRTALTDAAGVASLLTTAEAV
VTEIPKEDPPMPGGMGGMGGMGGMGGMGGMGM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtacagactaccgaatatgttacgaggcgtagccctgcgccagctgaatttccactct
agatcttatgccaaagatgttcgtttcgggcccgaagttcgagctttgatgctgcagggg
gtggatatactagctgacgcggtagctgtaacaatgggccctaaaggtcgtaatgttatt
ttggaacagagttggggaagccctaaaatcaccaaggatggagtaacagtagccaaagga
atagagctcaaagacaagtttcaaaacattggagcaaagctagtacaagacgttgccaac
aatactaatgaagaggctggggatggtacgacaaccgcaactgttttggccagagcaatc
gccaaagaaggttttgagaaaatcagcaaaggtgctaaccctgttgaaattagacgaggc
gttatgctggcagtagagcaggtaaaagaggagctgaagaaattgagcaagcctgttaca
acaccggaagagatagcacaggtagctactatttctgccaacggagacacagcaataggc
aatcttatttctgatgctatgaagagagtcggaaaggagggtgtaattactgtgaaggat
ggaaaaacccttaccgatgagctggaggtcattgagggaatgaagttcgaccgtggatac
atctctccatatttcataaactcgagcaaaggtgctaaagtagagttccaggatgcgttg
gtgatatttagtgaaaagaagatctcatctgttcagagcataattcctgctttggaacta
gctaactcgcagcgcaaacctctagttattattgctgaagacatcgacggagaggctctg
tccacactggtcgtcaaccgtctgaaaattggcctccaagtcgctgctgtgaaggcacct
ggatttggcgataatcgtaaggcaacactccaagacatggccatatctactggtggtatt
gttttcggagacgacgctaatctcatcaaattagaagatgttcagatgaatgacctcggt
caggttggcgagattgtcattactaaggatgatactctaattctgaaaggtaaaggtaaa
aaagaagacattgataggagagcagaacaaattcgcgaccagattgccaataccacttct
gattacgagaaagagaagctccaagaacgtttggccagacttgcctcaggtgtagcagtt
ttgagggttggtggtagcagcgaagtagaagtcaatgaaaagaaagatcgtgttcacgat
gcacttaatgctactagggctgccgttgaagagggtattgttcctggaggtggaactgcc
cttctccgttgcgtgcctgccctattaaagatgaaggcgaacaattctgaccaggagact
ggtattaaaattgttgcacattcgctgcgtatgccatgtcttcagatagcacaaaatgca
ggtgtcgacgggagtgtggttgtcgccaaagtgagcgagggcacattgggttatgacgca
ttgaataacgaatacgtagatatgattcaaaagggtataattgatccaacaaaagttgta
cgtaccgcactcaccgatgcagcaggagtcgcgtctcttcttacaacagcagaggctgtt
gttacggaaattcctaaggaagatccaccgatgcctggtggaatgggcggaatgggcgga
atgggcggaatgggcggaatgggtggaatggggatgtaa
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