Neodiprion fabricii: 124182113
Help
Entry
124182113 CDS
T08986
Name
(RefSeq) exosome complex component RRP40 isoform X1
KO
K03681
exosome complex component RRP40
Organism
nfb
Neodiprion fabricii
Pathway
nfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124182113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124182113
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124182113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP40_S1
KH_6
Rrp40_N
RRP40_N_mamm
RRP4_S1
RAMA
Motif
Other DBs
NCBI-GeneID:
124182113
NCBI-ProteinID:
XP_046424900
LinkDB
All DBs
Position
5:3271463..3274415
Genome browser
AA seq
236 aa
AA seq
DB search
MEVNIKDVVVPGDVAAEIMKSSEKERVILGPGLRRDCDRVLVTKAGVLKRRKPAIFYVDS
YQKRYVPNRGENVVGIVTQKAGDIYRVDIGAGELASLSYLAFEGATKKNRPDIVVGDVIF
AKLLVASKGMEPELICVDSHGKKGKLGVLSPDGMLFDCSLSLARKLLHPSCQLLTLLAKE
QAYEIAIGMNGKIWMKARSVHETIAACNAILAAENTPPTEMPALCSSIARNLLRIS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaaatattaaggatgttgtggttcctggcgatgtcgcggcagaaataatgaaa
tcaagtgaaaaagagcgagtgattcttggtcctggactgcgtcgcgactgcgaccgcgtc
cttgtcaccaaagctggtgtactgaagaggcgaaaaccagctatattttacgtggatagc
tatcagaaaaggtacgtcccgaacagaggggagaatgttgttggaatagtgacgcagaag
gctggggatatttacagagttgacatcggggcaggggaactggcatctctatcctacttg
gcttttgaaggagcaacaaaaaagaatcgacctgacattgtcgtaggtgacgtgattttt
gccaagctactggtggctagcaaaggcatggaaccggagttgatatgtgtcgattctcat
gggaagaagggcaagttaggtgtcttaagtccagatgggatgctgtttgattgttccctt
agtttggcgaggaaattgcttcacccaagttgtcagctattgacattgcttgccaaagaa
caggcctacgaaatcgccataggtatgaatggaaagatctggatgaaggccagatcggtc
cacgagacaatagcggcttgcaatgctattttagctgcggaaaacaccccaccaacagaa
atgccagccttgtgttcgagtatcgcccgtaatttactccgaataagctaa
DBGET
integrated database retrieval system
