Neodiprion fabricii: 124182177
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Entry
124182177 CDS
T08986
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfb03016
]
124182177
Enzymes [BR:
nfb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
124182177
Transfer RNA biogenesis [BR:
nfb03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
124182177
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
124182177
NCBI-ProteinID:
XP_046425064
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Position
5:complement(18815720..18818184)
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AA seq
545 aa
AA seq
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MSSPCSDIIDDIEDLISSQDITPKERYSTKKNVTVRAKRKKDIREAPEATILSSVIPGTQ
TIYVKTWGCTHNSSDSEYMAGQLAAYGYNLTEDKSQADLWLLNSCTVKNPAEDHFRNEIE
LGRCSGKHVVVAGCVPQGAPKTGFLSGLSVIGVQQIDRVVEVVEETLKGNSVRFLGQKKE
QGKKIGGASLALPKVRRNPLIEIIAINTGCLNQCTYCKTKHARGELGSYQPDEIIERAKQ
AFSEGVCELWLTSEDTGTYGRDIGSSLPELLWRLVEVVPEGCMMRIGMTNPPYILEHLEE
MGKILQHPRVYSFLHVPVQSGSDQVLADMKREYCCADFEQVVNFLQARVPGVTIATDIIC
GFPTETDNDFEDTMTLCKKYKFPSLFINQFYPRPGTPAARMDKVPAQEVKKRTKKLSEFF
QSYEPYGHKVGQVQNVLVTEISHDKKHFVGHNKFYEQVLVPMRDGFMGKMVQVRIISATK
HSMKGQPLDEGISASIRTPLPKGIVSGIIEVAETKQSEPSKYRLFALIAIFLAVLARFLW
KLLNV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccctgcagtgacataatagacgacatcgaggacctgatatcatcccaggac
ataacgccgaaggagcgttacagcaccaagaaaaacgtgacagtgcgagccaagcgaaaa
aaggacatccgcgaagctccggaggctacaatcctgtccagcgtcattccaggcacgcaa
acaatctacgtgaagacctggggctgcacgcacaacagttcagatagcgaatacatggct
ggtcagctggcagcgtacggctataatttgacagaggacaaaagccaggctgatctgtgg
ttgttaaattcatgtacggtaaaaaacccagccgaagatcatttcaggaatgaaatcgag
ctcggcagatgcagcggcaagcacgttgtagtcgctggctgcgtgcctcagggtgcaccg
aaaacaggtttcctgtccggtctgagcgtaattggcgtccagcagatcgaccgggtggtc
gaggtggtcgaggagacgttgaaaggaaactcggttagatttctgggtcagaagaaagag
cagggaaagaaaatcggcggagcttcgctggccctgccgaaagtcaggcggaacccactg
atcgagatcatcgccataaacacaggctgcctgaaccagtgcacctactgtaaaacaaag
cacgcgagaggcgaattgggcagctatcaaccggacgagataattgagcgtgccaagcag
gccttttccgagggcgtctgtgaactctggcttacctctgaggacacagggacctacggc
cgtgatatcggctccagccttccggagctcctctggagactcgtggaagtcgtgcccgag
ggctgcatgatgcgtatcgggatgacaaaccccccctacatcctggagcaccttgaagag
atgggcaaaattcttcaacatcccagagtctacagttttctgcacgtccctgttcagtcg
ggcagcgatcaggtgctcgcagatatgaagagagagtattgctgcgctgactttgaacag
gttgttaatttcctgcaagcccgggtaccgggcgtcaccattgccacggacataatatgc
ggttttcctaccgagacagacaacgactttgaggacaccatgaccctctgcaaaaagtac
aagttcccaagtctgttcatcaaccagttttatcccaggcctggaactccggctgcaagg
atggacaaggttcctgctcaggaagtcaaaaagagaacgaaaaagttgtccgaatttttt
cagtcctacgaaccgtacggtcacaaagttggccaggttcaaaatgttctcgtcactgag
atttctcacgacaagaaacacttcgttgggcacaacaagttctatgaacaggttttggtg
cccatgagggatgggttcatgggtaagatggttcaggtacgaatcatatccgccaccaaa
cattctatgaaaggacagccgctcgatgaaggaatctctgcgtcgatcagaactccgctg
cccaaagggattgtctccggtattattgaagttgccgaaaccaaacaatccgaaccatcc
aaatacagactgtttgctctcattgcaattttcttggcggtgttggccagatttttatgg
aaacttttaaacgtttga
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