Neodiprion fabricii: 124182288
Help
Entry
124182288 CDS
T08986
Name
(RefSeq) plexin-A4 isoform X1
KO
K06820
plexin A
Organism
nfb
Neodiprion fabricii
Pathway
nfb04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124182288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
PSI
Sema
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
124182288
NCBI-ProteinID:
XP_046425290
LinkDB
All DBs
Position
5:31140362..31210289
Genome browser
AA seq
1919 aa
AA seq
DB search
MLPRGTRALLALLVLSSSMRPSRSTPADIVHTFADPDVERLNHLVVDKNTGRVFVGGVNC
LYQLSPDLDLVVKEVTGPKNDSNDCSMIDCPAGVVKKLTDNVNKALVIDYTTTRLISCGS
LFQGMCTVRNLHNISDVAQEVREAVVANNATASTVAFIAPGPPNPPVSQVMYVGVTYTAN
SPYRSEVPAVSSRSLDKERMLVIAETAVTTGTRMFVNSLARERFPINYVHGFSSEGFSYF
LTTQPKSTATGSEFISKLVRVCHDDQNYYSYTEIPIDCTNELRKYNLVQAAYAGKAGSDL
AGHLGITAQDDVLFAVFSESNATTNRPSSRSALCVYSLKAIRRKFMSNIQHCFAGHGQRG
LDFISPSHQCVLTKLQTIAEDFCGLDVNTPLGGQDPIIAVPVLAFEEHLTAVAATSTGDY
TVVFVGTSDGHLKKVVVETATSAQKYGDLEVDPKSPVNSDLHFDSQLMHLYVMTQRKVSK
VKVQECSVYKTCWDCLEAKDPYCGWCSLENKCNLRSDCQDAATDPLYWISYKSGRCTTIA
SVTPNQLQRTTARTLDLVIENLPTLPGQFLCAFSALDKTLITNATRKSYGVNCTTPRTDL
LPSIPQAEHHFTARLSVRMTSGPDLVATNFTFFDCNTYSSCTQCVSSSFPCDWCVDGHRC
THDTAENCRNDILVTGVSRIGPSYRSGPGFCPTINATDSKEILVSSGIKKNIRVKVHIIG
QFIVQTRFVCQFNIEGRVTSVNAQLLADTIYCDSTEFSYTSRAPNITVPFAVIWGGSKPL
DNPDNIHVVIYRCKDMADNCGMCLALAQKYGCGWCQSSDKCEVKEQCNNRGSGIWLNRNE
TCPNPKIQSFEPQLGPWEGGTNVTIRGINLGKTFADIYAGATIAGLPCEPYPELYIRTKQ
IVCKVDGPGTPQERKGPVIVKIEDFRGYSDVNFEFVDPVIESISPKYGPRSGGTVIRITG
RYMNAGSRIRAFIDTLPCSIISAEANETLCMTSASNTTRSSVLRMQFDSGVRQYNGVFEY
VDDPTIESVESGVAGQIKIPKGIPAGGIKISVIGKNLGYVQNPQMYVYYDDKMFVSQCAT
FSHTNMICNSPAVEVSEDTHLDADHPLMLEYGFRMDNVTGVQNLSANGHKNFLLYPNPVY
DVFEEEVKYYKSDYLTINGQNLDRACQDSDVTVQIGNSFCNVTSLSRQQLTCRPPLHQPP
ALDNTGLANKQELPEVIVVVGGGLKYKIGKLSYASPTGINGSLSRPAMYGVSAAIVILLF
IFTAFLVAYRRKSTESNRVLKNMQEQMDILELRVAAECKEAFAELQTEMTDLTGDLTSGG
IPFLDYRTYAMKILFPNIDDHVVLQRERPELMRKEKGLRLFGQLIMNKTFLLLFIRTLES
NRYFSMRDRVNVASLIMVTLQSKMEYCTDILKTLLAELIEKCMEGKSHPKLLLRRTESVA
EKMLSAWFTFLLYKFLRECAGEPLYMLFRGMKQQVDKGPVDAITSEARYSLSEEKLIRQS
IDFKAMTAYVSISQQTVFVSGLDPNTENVAVKVLDCDTISQVKEKALDTIYRATPYSQRP
RKDDLDLVFHRLLSAEWRTGTSGRLILYDDDSTTKAEGDWKKRNTLNHYRVPDGASLNLV
SKQSSLYNISILSEKTDKSHKYETLNLSKFSSASPPLSRATSPLNHDHDSGIKYWHLVKH
HDTDAQKEGERGNKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMF
DFLDDQALLHGISDPEVVHTWKSNSLPLRFWVNLIKNPNFVFDIHKSNIVDSCLSVVAQT
FMDSCSTSDHRLGKDSPSSKLLYAKDIPGYKEWVDRYYSDIKIMPAISDQDMNAMLAEES
RLHSTEFNTNCALYELYTYAVKYNEQLIVTLEEDEFSQKQRLAYKLEQVHNIMAAEGNP
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgttaccacgaggaacaagggcgttgctcgccctgctggtactctcgtcgtcgatgagg
ccgtcgaggagcacgcccgccgacatagtgcacacgttcgccgaccccgacgtcgagcgt
ctgaaccacctggtggtggacaagaacacggggcgagtattcgtgggtggtgtgaactgt
ctgtaccaactgtcgccggacctggacttggtggtgaaggaggtcacgggaccgaagaac
gactcgaacgactgttcgatgatcgactgtcccgccggcgtggtcaagaagctgaccgac
aacgtgaacaaggctctggtcatcgactacacgaccacgagactgatatcgtgcggcagt
ctgttccaggggatgtgcacggttcggaatctccacaacatatcggacgttgctcaggag
gtgcgggaggccgtcgtcgccaacaacgcgaccgcgtcgacggtggccttcatcgcaccg
ggtcccccgaacccgccggtctcccaggtcatgtacgtcggcgtgacttacacggcgaat
tcgccgtacaggtccgaagtcccagcggttagctcgaggtcgctggacaaggagcggatg
ctcgtgatcgccgagacggcggtgacgaccgggacgagaatgttcgtcaactctttggcc
agggaacggttccccataaactacgtgcacggtttcagcagcgagggtttcagctacttc
ctcaccacccagccgaagagtaccgccaccggaagcgagttcatatccaagctggtgcgc
gtctgtcacgacgatcagaactactactcgtacaccgagataccgatcgactgcacgaac
gagctcaggaagtacaacctcgtccaagcagcctacgccggcaaggctggatccgacctt
gccgggcacctcggcatcaccgctcaggacgatgtactcttcgccgttttctccgagagc
aacgccaccaccaacagaccgtcctccaggtccgcgctctgcgtctactccctaaaagcc
atcaggagaaagttcatgtccaatattcaacactgcttcgccgggcacgggcagcgggga
ttggacttcatatcgccgagtcatcagtgcgttcttacgaagctgcagactatcgccgaa
gatttttgcggtctcgatgtcaacacgcctctaggaggtcaggatcctatcattgctgta
ccggtcctcgctttcgaggagcatctaactgccgttgctgcaacatcgaccggtgattac
accgttgtctttgtcggcacgagcgacggccatctcaagaaagtcgtcgttgagactgcg
acctcggctcagaagtatggtgatcttgaagtggatccgaaatccccggtgaattcggac
ctacattttgactctcagcttatgcatctctacgtaatgacacaacgcaaggtgtccaag
gtcaaagttcaggaatgctcggtatacaagacgtgttgggattgcttggaggccaaggat
ccttactgtggttggtgctcgttggagaacaagtgcaatctgagaagcgactgtcaggat
gcagccaccgatcccttgtactggatttcgtacaagagcggtcggtgcactaccatagca
agcgtcactccgaatcagctgcaaagaacgactgcaaggaccctggatcttgtgatagag
aaccttccgactctcccgggacagtttctctgcgcgttctcggccctcgataaaaccctc
ataacaaatgctactcgaaaatcgtacggcgttaattgcaccactccaaggaccgatctg
ctgccgtcgataccccaagccgagcaccacttcacggccagattgtccgtccgaatgacc
agcggacccgacctcgttgccacgaatttcaccttcttcgactgtaacacgtacagctct
tgtacccagtgcgtttcgtcgagcttcccctgcgactggtgcgtcgatggtcacagatgc
actcacgatactgccgagaattgccgcaatgacatattggtcaccggagtcagcagaatc
ggcccgagttatagaagtggaccaggtttctgtcctactattaacgccacggattctaaa
gaaatactggtctcgtctggaataaagaaaaatattcgtgtcaaagtgcatatcattggg
caattcatcgtacaaacgaggttcgtctgtcagttcaacatcgaaggacgtgtaaccagc
gttaacgcacagcttctagcagacacaatatattgcgattcgacagaattttcatacacg
tcaagggcgcctaacatcacggtacccttcgcagtgatatgggggggctcaaagcctctg
gacaatcctgacaacattcacgttgttatataccgttgtaaggacatggctgacaactgt
ggcatgtgtttggctcttgcccaaaagtacggatgcgggtggtgtcaaagctctgataag
tgtgaggtgaaagaacagtgcaataatcgaggttccggcatttggctaaacagaaatgaa
acctgcccaaacccgaagattcaatcgttcgagccgcagcttggaccctgggaaggaggt
accaatgtaactatacgaggaataaacttggggaaaacatttgccgatatatacgctggg
gcgacgattgccggacttccgtgcgagccttaccctgaactttacatcaggacgaaacag
atcgtatgcaaagttgacggacctggtactcctcaggagcgaaagggacccgtgatagtc
aagatagaggatttccgtggttactcggacgtcaactttgaattcgtcgaccctgtcatc
gagtccatatcgcctaagtatggccctcggagtggcgggaccgtaatcaggataacagga
cgttacatgaacgccggcagcaggatacgcgctttcatagacacgctaccgtgctccata
ataagcgccgaggccaacgagactctctgcatgaccagtgccagcaacaccactcgtagc
agtgtgctaaggatgcagtttgacagcggagttaggcagtacaacggcgttttcgaatac
gtcgacgaccccacgatagaatcagtcgagagcggcgttgcgggacagatcaaaataccc
aagggaattcccgcaggtggtataaagatatcggtaatcgggaagaatcttggatacgtg
cagaatcctcaaatgtacgtctattacgacgataaaatgttcgtctctcagtgcgctacg
ttcagccatacaaacatgatatgcaattcacccgccgtcgaagtatccgaagatactcac
ctggacgctgatcatccactgatgctggagtacggattccgcatggacaatgtcacgggc
gtacagaatctctccgctaatgggcacaaaaacttcctgctctacccgaatcctgtctac
gacgtgttcgaggaggaagtgaagtactacaaaagcgactatctcaccataaacggtcag
aacttggaccgcgcatgtcaggattcggacgtaactgtccagatcggcaattccttctgc
aacgtgacgtccctatcgaggcaacaactaacatgtcgacccccattacatcagcctcca
gccttggacaatacgggtcttgccaacaagcaggaacttccagaggtgattgtagtcgtc
ggaggtggactgaagtataaaattgggaagctcagctacgcctcgccaaccggtatcaac
gggtcgttgtccaggcccgcgatgtacggagtttcagcggccatagtaatcctgctgttc
attttcacggcgttcctcgtcgcttatcgcaggaaatcaacggagagcaacagagtgctg
aaaaatatgcaggagcaaatggatatccttgaactcagggtcgccgccgagtgcaaggaa
gcctttgccgagctgcaaaccgagatgacggatttgaccggcgatctgaccagcggcggc
attccgttccttgactacagaacttacgccatgaaaatactctttcctaatatcgatgac
cacgtcgtcctgcagagagagagacctgaactgatgagaaaagaaaagggactcagattg
ttcgggcagctgatcatgaacaaaacattcttactgctcttcattaggacccttgaaagt
aacagatacttctcgatgagggatcgagtcaatgttgccagccttataatggtcacgctt
caaagtaagatggagtactgtacagacattctcaagacacttttagccgaacttattgaa
aaatgcatggagggaaaaagtcatccgaagctacttttgagaagaactgagagcgtcgct
gaaaaaatgctctccgcatggttcacttttcttctttacaaattcttgagagaatgcgcc
ggcgagccactgtacatgctattcagaggtatgaaacagcaggtggacaagggaccggtt
gacgcgattacctcagaggctcgatactcattgtcagaagaaaaattgattcggcagtct
atcgactttaaggcaatgaccgcctacgtgtcgatatcccagcaaactgtatttgtcagt
ggattggatccaaacactgagaacgtcgcggtgaaggttttggactgtgacacgatatcc
caggtgaaagagaaggcattggatacgatatacagagctactccgtacagccagagaccg
cgaaaagacgacctggatctcgtttttcatcgtttgttatctgcagaatggcgcaccggt
acatcgggcagattaatactgtacgacgacgactcaacaactaaggctgagggagactgg
aaaaagaggaacacgctgaaccactacagagtgccggatggcgcgtctctgaatctagtc
tcgaaacagtcgtctctctacaacatctcgatactctcggagaaaactgacaagtctcac
aaatatgaaacactgaatctcagcaaattcagttccgccagtcctccgttgtcccgtgct
acttcgccgctaaaccatgatcacgacagcggaataaagtactggcatctcgtcaagcat
catgacacagacgctcagaaggagggcgaacgcggtaacaaaatggtctcggaaatatac
ctcacaaggctactcgcgaccaagggtaccctccaaaagttcgtcgatgatctgttcgag
accatattcagtaccgcgcatcgggggtccgctcttcccctcgcgataaaatacatgttc
gatttcctcgacgatcaagctctgcttcacggcatatcagaccccgaggtcgtacacacg
tggaagagcaactccctgccccttagattttgggtcaatcttatcaagaatccaaacttc
gtattcgatattcataaatcgaacatcgttgactcctgcttatctgtcgtcgcccagacc
ttcatggacagttgctcaacgtcggaccatagattaggtaaagactcgccgagttccaag
ctattatacgcaaaagacattccagggtacaaagaatgggtggatcgatattattccgat
attaaaattatgcccgcaatctctgatcaagatatgaacgctatgcttgccgaagaatct
agactgcactcgacagaattcaacacgaactgcgcactctacgaattgtacacatacgcg
gtaaaatacaacgaacaattaatcgtaacgttggaggaggacgagttttcgcagaagcag
aggctggcctacaagctcgagcaagtgcacaacataatggcagcggagggaaatccctga
DBGET
integrated database retrieval system