Neodiprion fabricii: 124182569
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Entry
124182569 CDS
T08986
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124182569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124182569
03016 Transfer RNA biogenesis [BR:
nfb03016
]
124182569
Enzymes [BR:
nfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
124182569
Messenger RNA biogenesis [BR:
nfb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
124182569
Transfer RNA biogenesis [BR:
nfb03016
]
Prokaryotic type
tRNA degradation factors
124182569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
Motif
Other DBs
NCBI-GeneID:
124182569
NCBI-ProteinID:
XP_046425968
LinkDB
All DBs
Position
5:complement(15925477..15931766)
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AA seq
764 aa
AA seq
DB search
MASIMFFRLLTKRKLLSKYKRSLCIPRISSCKYSTQNRQLEKSEVRVNLSNGNELTFSTG
QYAKLADGCAVASIGDTAVMVTTVSKVRASNNLFLPLVVDYRQKAAAAGRIPTNFFRKEL
GPTEHEILTSRLIDRSLRPLFPDKYCYDTQVMCNILAVDGVNDPDIISINAASAALSLSD
IPWNGPVGAVRVGLVDQEILINPTRRQMQKSDLNLIVSAMANSLIVMLEGSANDILQPDF
FKALKVGVKECQNIVQSILQLQKQYGKAKRQIQAIPETHEEIKESIKILSEMRLREIFRD
HKHDKISRDNAVNNIRTDVIEKIKQEHPNIDSTVVSEEFSALSKEIFRSLIFEDNVRCDG
RELHELRDISCQVNLHNPLHGSAVFQRGQTQVFCTVTLDSPESALKLDTISMLTSGIKEK
NFFLHYEFPPFATNETGRSGPSGRREIGHGALAERGLRAVLPKDYPFTIRLTSEVLESNG
SSSMASVCGGSLALMDAGVPITTAAAGVAMGLITKYDETKQINDYKVLTDLLGIEDYMGD
MDFKLAGTKKGITAVQADIKIPGIPLKIVFEALQQGHNAKSKIIEIMNSAIAKPREVKKP
NMPVSEMLEVPIHMRAKFVGISGSNLKKILVETGVQVNQVDDTIFSLFAPNQTAMDEAKE
IIDRILTAEREPVLEFGAIYNAKIVEIRDLGVMVTLYPSMNPALLHNSQLDQRKINHPSA
LNFEVGQVIHVKYFGRDPVSGAMRLSRKVLQSGAVAPVKNFTNS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgattatgttttttaggttattgacaaaacgtaaattgctatctaaatataaa
agaagtctgtgtatccctcgtatatcaagttgtaaatacagtacccagaatcgacagctc
gagaaatcagaagtccgcgttaatcttagtaatgggaatgaactcacattctcgacgggt
caatacgccaaactggcagatggatgtgcggtagcatcgattggtgacaccgccgttatg
gtcacaacggtcagtaaagtgagagcttcaaataacttatttttaccgcttgtcgtcgac
tacaggcaaaaggcagcagccgccggtcgaatacctacaaattttttccgcaaggaactg
ggtcccaccgaacatgagatcctgaccagtcgcctaatcgaccgttccctgcgtccgcta
ttcccagacaaatactgctatgacactcaagtgatgtgcaacattttggctgtcgatgga
gtcaatgacccagatataatttcgataaacgcggcatcggcagctttgtctttgtcggat
attccttggaatggaccggtcggtgctgtcagagtgggattagtggatcaagaaatcctt
ataaacccgacgagaaggcagatgcaaaaaagtgatctgaatctaatagtcagcgcaatg
gcgaacagtcttattgtcatgctcgaaggctctgcaaacgatatacttcagcctgatttt
ttcaaggcgttaaaagttggtgtcaaagaatgtcagaacattgtacagagcatattacag
ttgcaaaagcaatacggcaaagctaaaagacaaatccaggcaattcctgagacacacgaa
gagatcaaagagtccataaaaattctctcagaaatgaggctgcgggaaatattcagagat
cacaaacatgataaaatatcacgagacaatgcagtgaataacataagaactgatgtcatt
gagaaaattaaacaggaacatcccaatatcgattctactgttgtatcggaagaattttca
gcgctaagcaaagagatattccggtcgctcatctttgaagacaatgtaaggtgtgacggg
cgagagcttcatgaattgcgcgacatatcgtgccaagtcaatcttcacaaccccctccat
gggtctgcagtattccagagaggacaaacgcaagtgttctgtacagtaactctagattca
ccggaaagtgctctgaaactggataccatttctatgctgacaagtggaataaaggaaaaa
aattttttcttgcactacgagtttccaccatttgcaacaaatgaaactggacgttcagga
ccgagtggacgaagagagattggtcacggtgctcttgccgagcgaggattacgtgctgtt
cttcccaaagactatccctttactataaggctcaccagcgaggtattagagtccaatggc
tcttcgtcaatggcatctgtttgcggtggaagtttagccctgatggatgctggtgttcca
ataaccacagcagctgcgggggtagcgatgggtttgattacaaagtatgatgaaactaag
cagatcaacgactacaaagtcctcacagatttattgggtatcgaagactacatgggcgac
atggacttcaaactagcgggtacaaagaaagggatcacggccgtacaagcggacatcaaa
attcccgggattccgttaaaaattgtatttgaagcattgcagcaaggccataacgcgaaa
tcaaagattattgagatcatgaattctgcgatcgccaagccgagagaagtgaaaaaacca
aatatgcctgtgtcggaaatgcttgaagtacccattcatatgcgagccaagtttgttgga
atttcaggctcgaatcttaaaaaaatactcgtcgaaactggagttcaggtgaatcaagtc
gatgacacgatcttctcactgtttgctcctaatcaaactgcaatggacgaagcaaaagaa
ataattgatcggattcttactgcggaacgtgagccagttttagagtttggggcaatttat
aatgccaagattgtggagattcgtgacttaggagtgatggtcacattgtatccgagtatg
aatccggcattgttgcataattcgcagttggatcaacggaaaataaatcatccaagtgct
ctgaatttcgaagttggtcaagtgatacatgttaaatattttggccgagatcctgtatca
ggagcgatgaggttatcgagaaaagttctacaaagtggtgctgtcgcgcctgtgaaaaac
tttacaaattcgtga
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