KEGG   Neodiprion fabricii: 124182658
Entry
124182658         CDS       T08986                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
nfb  Neodiprion fabricii
Pathway
nfb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124182658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nfb03041]
    124182658
Spliceosome [BR:nfb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    124182658
 Complex C
   U5 SnRNP specific factors
    124182658
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_SPT8 eIF2A Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Nbas_N Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Tricorn_2nd Beta-prop_VPS8 WD_LRWD1
Other DBs
NCBI-GeneID: 124182658
NCBI-ProteinID: XP_046426150
LinkDB
Position
1:complement(26395459..26397446)
AA seq 371 aa
MHSSAARWFVVCEKTFYSFTITMPILDKRKGDEILALVPASKRTKNEVVFSSREKAVIQS
GPPRTSSLMAPIMLLEGHQGDIFSVEFHPEGQYLASTGFDRQIFIWNVYGECENIAVMSG
HSGAVMEMHFSPDGSNLYTASTDMTLGLWDLGSGYRIKKLKGHTSFVNSISGARRGPTQL
CSGSDDSTIRVWDPRKRGQCQTLNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNAV
LYRLKGHTDTVTGLSLSPDGSYILSNSMDNTLKIWDVRPFGPYERCVKILSGHQHNFEKN
LLRCAWSPDGSKVSSGSSDRFHYIWDTTSRRILYKLPGHNGSINDVDFHPKEPIVVSGSS
DKQIYLGEIEG
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgcacagttcggctgctcgctggtttgttgtttgtgaaaagacattttacagttttaca
ataacaatgccgatcttagacaagagaaaaggtgatgagattctagcattggtgccagct
tcgaaaaggacgaaaaatgaagtggttttcagcagtagagaaaaggcggtgatccaaagt
ggccctcccagaacttcatcacttatggcgccgattatgctccttgaaggacaccaagga
gatattttctctgttgagtttcatccggagggtcaatacctcgcatcgacgggttttgac
agacaaatatttatatggaacgtctatggcgaatgtgagaacattgctgtaatgtcgggc
catagcggcgcagtgatggaaatgcacttcagcccagatggcagtaacttgtacactgca
agcacagatatgaccctgggactctgggatctcggatctggatacagaataaagaaactc
aaaggacacacatcgtttgttaattctatatccggagctcggagaggacctacacaactt
tgttctggcagtgatgatagcactattcgtgtctgggatccaagaaaaaggggccagtgt
cagactcttaataatacctaccaggtaactgctgtgacattcaatgatacagcggaacaa
gtcatcagcgggggtattgacaacgacattaaagtttgggacttacgaaaaaacgcagtg
ctctatagattgaagggtcacacagatacggttactggtttgagcctgagtccagatggt
tcttacatattatcgaattcaatggacaacacccttaaaatatgggacgtccgtcctttt
ggaccctatgaaagatgcgtcaaaattttatccggccatcagcataatttcgagaagaac
cttctgaggtgtgcatggtcaccagatggcagcaaagtgtcttcaggatcgtcagataga
tttcactatatctgggacacgacaagccgacgtatcctttacaagctccctggtcataat
ggatcaattaacgatgttgattttcatccaaaagaaccaatcgttgtttccggctccagt
gacaaacagatataccttggagaaattgaaggctga

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