Neodiprion fabricii: 124182754
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Entry
124182754 CDS
T08986
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfb04121
]
124182754
Ubiquitin system [BR:
nfb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124182754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
TPR_19
TPR_2
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
TPR_17
TPR_11
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
TPR_1
NBCH_WD40
TPR_16
Beta-prop_RIG_2nd
ANAPC3
Beta-prop_WDR19_1st
Beta-prop_HPS5
DsrC
Motif
Other DBs
NCBI-GeneID:
124182754
NCBI-ProteinID:
XP_046426357
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Position
5:32457200..32463890
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AA seq
704 aa
AA seq
DB search
MKMFSKENPRVVDLVRQRELSESCAASLSRKLQVTDDLVARLGLEKELEGHGGCVNCLEW
NESGEILASASDDTHVILWDPFRYTKKKVFRTGHSGNIFSVKFMPKSNDGILVTGAGDCC
IRVHDITVSDTILVCSCHKGRVKRIATAPSVPFMFWTAGEDGLILQYDTRVPHSCTSQDR
RAVLINLVNHLGRLAEAKCITINARRPELIAIGANDAYVRMYDRRMIKPSTCQATPASNV
DAVNENSEGIDAQAHLQRAGKGDSDDNIPLGCARYFVAGHLRTRHQDQKRNRSLAATYLT
FSADGNDLLVNMGGEQIYLFDVNKGSSSKFLPKWTNGTRYSVPGDQWCSDQKRDEGIQLE
TYFKHNDPLVLPIHIENIKEEANTAFQKQKYTTAINLYNKAIAWCPHGAVLYANRAASFM
KRAWDGDIYAALQDCQTTILLDPRHVKAHFRLARCLYELNRAPEAHKVIKNFQQNFPEFA
TNSACRALYKDIKKALGSEETNEEETDEVEEEEDKDEVEFPVGQVAQGVSAHELYWQRNS
VDYDIRFCGHCNTTTDIKEANFFGSDGQYIVAGSDDGSFFIWDRETTNILRVLRGDESIV
NCLQPHPSSCLLATSGIDPVIRLWSPRPEDGSQNERAIENLEDVASANQLRMKSNTFELM
LLNMGYRFPGQQDHNQDQSGDDGDERERPMSPSQTSQSLNCRQS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttttccaaagaaaatcccagagttgtggacctggtccgtcaaagagaactg
tcggaatcctgtgccgcttctctgtcaaggaaactgcaggtgactgatgatttggtagcc
cgtttgggtttagaaaaagagcttgagggtcacggaggttgtgtcaattgtttggaatgg
aatgagtccggggaaattcttgcgtctgcttcggacgacacacatgtcatactgtgggat
ccgttcagatatacaaagaaaaaggtatttcgcacaggacacagtggaaatatattttct
gtcaagtttatgccaaaatcaaacgatggcattttggtaaccggagcaggggactgctgc
attcgtgttcacgatatcacagtctcagacacgatattagtatgtagttgccataaaggt
cgtgtgaaaaggatcgcaacagcgccaagtgtaccattcatgttttggactgctggagaa
gacgggctaatattgcaatatgacacaagggttccacacagttgcacatcccaggaccga
agggcagttcttattaacctggtcaatcaccttggtcgtctcgccgaagcaaaatgcatc
acgattaatgctcgcagaccagaactcattgccatcggtgccaatgatgcctatgtcagg
atgtacgacagaagaatgatcaaaccatctacttgccaggctacgccagcctccaatgtc
gacgcagtgaatgaaaactcggagggaattgatgctcaagcccacttgcagcgtgctgga
aaaggcgactcagacgataacattcccttaggctgtgctcggtacttcgttgccggccac
ttgcgaacgcggcatcaagaccaaaagaggaatagaagcctagctgcaacttatctcaca
tttagcgccgatggaaatgaccttctcgtcaatatgggtggcgaacaaatttatctcttc
gacgttaacaagggcagcagctcaaaattccttcctaagtggacgaatgggacgcgatat
tcggtgcccggtgatcaatggtgctcggatcaaaagcgggatgagggaatccagctagag
acttacttcaagcataatgaccctttggtcctgcccattcacattgagaacatcaaagaa
gaagcaaatacagcctttcagaaacagaagtatacaacggcgataaacttgtacaacaag
gctatagcttggtgcccgcacggagctgtcctttacgcaaatagagctgcatccttcatg
aaacgtgcctgggatggcgacatctatgcagcgcttcaggactgtcaaacgacgattctt
ctcgatccaagacacgtcaaagctcattttagactagccagatgtctttacgagttaaac
cgagccccggaagctcacaaagtgataaaaaacttccagcagaattttcccgaatttgca
acaaactcagcttgccgggctttgtacaaagacatcaagaaagcactcggctctgaggaa
accaatgaagaagaaactgatgaggttgaagaagaagaggacaaggatgaggtcgaattt
cccgtaggccaagtcgcgcagggtgtatcagcacacgagctgtactggcaacgaaacagc
gttgattacgatatccgattctgtggtcactgtaatacgacgactgacataaaagaggca
aatttctttggcagcgatgggcaatacattgtggcaggatctgatgacggatcttttttc
atatgggaccgtgaaacaacaaatattcttagagtgctacgcggcgatgaaagcatcgtt
aattgccttcaaccacatccatcttcgtgtctcctggccactagtggtatcgatccagtt
attcggctatggagtcctcgcccagaggatgggagccagaacgagcgagctatagaaaat
ctggaggatgtagcgtcggcaaatcaattaaggatgaagagcaacacgtttgaattgatg
ctgttgaacatgggatacaggtttccagggcaacaggatcacaaccaggatcaatcgggc
gatgacggagatgaacgtgagcgaccaatgagtccatcacagacatcacaatcgctcaat
tgccgccagagttaa
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