Neodiprion fabricii: 124182879
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Entry
124182879 CDS
T08986
Name
(RefSeq) DNA-binding protein SMUBP-2-like isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfb03009
]
124182879
03012 Translation factors [BR:
nfb03012
]
124182879
Enzymes [BR:
nfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124182879
5.6.2.5 RNA 5'-3' helicase
124182879
Ribosome biogenesis [BR:
nfb03009
]
Eukaryotic type
Other ribosome biogenesis factors
124182879
Translation factors [BR:
nfb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124182879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
SMUBP-2_HCS1_1B
zf-AN1
ResIII
Viral_helicase1
DEAD
PIF1
SLFN-g3_helicase
AAA_22
NAT10_TcmA_helicase
UvrD_C_2
Flavi_DEAD
T2SSE
AAA_18
DUF7205
nSTAND3
AAA_31
YqeC
AAA_6
AAA_25
nSTAND_NTPase5
DUF4537
cobW
Transp_Tc5_C
TrwB_AAD_bind
ABC_tran
AAA
IBR
CbiA
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
124182879
NCBI-ProteinID:
XP_046426611
LinkDB
All DBs
Position
5:30710215..30715499
Genome browser
AA seq
926 aa
AA seq
DB search
MDYVISSFVRKHIDLLRSERDENLQHVFNNISAQALRNLEKEGDALTKLSVGSLASRGLK
QLQIDFVDPNNLPLKHAFAVGDLVACIQSNNRSQFLPGLVSAISQRTISVTISDQTVVNV
NEEEQFAIIKADSDYTYNCQTRALKNLESTEIYSWRCFNVIRILFDNDEKIVQELIDMDN
EISEKYLNEDGQLKFINDKLAEDQRMAVSFALHKKFLAIIQGPPGTGKTTTLVELIGQLR
GLGKKVLVCAPTNVAVDNIAQKLCDAGIKPLRMGHPARIAKEVQSCSIDANVRQDNSYEI
LVQIKQSLKELQEKDGDTEKGGKPWGKIKELSKEYRERMDKLTSEIIRRHPVILCTLNSA
TTGKRAKTMRHVPREYFDVVVVDEASQALEASNWIAIPNAEKVVLAGDINQLPPAVMNQK
AAKNGLCVSLMERAIKKLGKKAYKSLEIQYRMNSKIMSWSSKQFYENTLKADKLVANHLL
RDLPGVESCPLTSDSVVFIDTCGCECEEYQIGSGTISKGNVGEAIVVDRLVAALVKSGVP
EREIGVITPYALQVDFVRKTLSTRSISAEVSTVDGFQGREKEVIVLSLVRSNEEKSLGFV
TDFRRLNVAVTRARRLLVVIVNSETVEDNKLITGLLKHIEDNGLLQTAQEYLEDNSEDLK
KDLEENVKVKQKSVVTNKTDSKTEKRKKPASKNGDKIKGETNLKSVLKDKGIDLSINANR
KDYNLFECISESNSDIEDTELLPNTPEIATEDPEETDEALPSVEQVESKPKIELSNLIAS
LKQLETTSTQVSSAGTPLASNQPVPMQAKKNKKSKNRKPKNSEITADDDLDKLIATVTAN
DYICAMAGCKKSTQLMHVDCEFCKSRFCFTHGMQEIHGCGEAVRNKERKEFVRRKPENCK
KTDKDKFARKLKQLEEARKPKKKVEK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggactatgtaatatcgagtttcgtcaggaaacatatagatttattgcgatcggaacgc
gacgagaatctccagcacgttttcaataacatatctgctcaagcccttcgtaacctcgaa
aaggaaggagatgcattgactaaattatccgttgggagtttggctagccgtggtttgaaa
cagctccaaattgacttcgtcgacccgaacaatctccccctgaagcatgcctttgccgtc
ggtgacttggtcgcctgcattcaatcaaataatcgcagccagtttctacctggtctcgtt
tcagccatctcacagagaaccatttcagtcaccatttcagatcaaactgttgtcaatgtc
aatgaggaggaacaattcgccatcatcaaagctgattccgattacacttacaattgccaa
accagagctttgaaaaatctggaatcaacggagatatattcctggcgatgtttcaatgtc
attagaattctttttgacaatgatgagaagattgttcaggagctaatagatatggacaat
gaaatctctgaaaaatatttgaatgaggatggtcagctgaagtttatcaatgataaactt
gctgaggatcagcgcatggcagtatcatttgctttgcataaaaaatttcttgccattatt
caaggaccccctggcacaggaaagactaccactttagttgaattaatcggccaattgcgg
gggctgggtaaaaaggtattggtgtgcgctccaactaatgttgcggtggacaacattgcc
cagaaattatgtgatgctggcataaagccattgagaatgggccatccagctaggatagcc
aaggaggtacagagttgttcaatagatgccaacgtgcggcaagataactcctatgaaatt
ttagttcagataaaacagtcgttaaaagaattgcaagaaaaggacggagacactgagaag
ggtgggaagccatggggtaaaatcaaagagctgagcaaagagtaccgtgaacgaatggac
aagctaacttctgagataatcagacggcatcctgtcattctctgcactctgaactctgca
actactggaaaacgtgctaaaactatgcggcacgtgcccagagaatattttgatgttgtt
gtagtggacgaagcttctcaggcgttggaggcctcgaattggattgcgattccaaatgcg
gagaaggttgtgcttgctggcgacattaaccagcttccgcctgctgttatgaaccaaaaa
gcagccaaaaacggactatgtgtgagcctcatggaaagggcgattaaaaaacttggaaag
aaagcttataagagtctcgaaattcagtacagaatgaatagcaaaatcatgtcgtggtct
agcaaacagttttatgaaaatactctcaaggcagacaaactcgttgcgaatcacttactc
agagatttgcctggagtggaatcatgtccgcttacaagtgattcggtagtgtttatcgac
acctgtggatgtgaatgcgaggagtatcaaatcggcagtgggacaatatcgaaaggaaac
gttggtgaagcgatcgtagttgaccgactagtagcggcactggtaaaatctggtgtccca
gaacgagaaattggtgtaataacgccatatgctctgcaggtagactttgtacgaaaaacg
ctgtcaactcgttctatatctgctgaagtttctacggttgatggctttcaaggtagagaa
aaggaagtgatcgtactatctttggtccggagtaatgaagaaaaatcactcggctttgtc
actgactttagacgtctaaacgtcgcggttacacgggcaagaagactgcttgtcgtcatc
gtgaacagcgaaactgttgaggataacaaattaattactggccttttgaagcatattgaa
gataacggtctgttacaaacagcgcaggagtatttggaagataattcggaggacctcaag
aaagacttggaagaaaatgtaaaagtgaaacagaaatctgtggtgaccaataagacggat
agtaagacagaaaagagaaagaaaccagcatcgaaaaatggcgataaaattaaaggtgaa
accaatttgaagagtgttctcaaagacaaaggaatcgatttgagtataaacgcaaatagg
aaagattataatctcttcgaatgtattagcgaaagtaattccgacattgaggacacagaa
ttacttccgaacacgccagaaatcgctacagaggacccagaagaaacggatgaagctttg
ccatccgttgagcaggtggaatcaaaacctaaaattgaattatccaatttgatcgcgagt
ttaaagcagctcgaaacaacttccacgcaagtttcctctgcaggtacgcctcttgcttca
aaccaacccgtgcctatgcaagctaagaagaataaaaaatctaaaaatcgtaagccgaaa
aattcggaaataacggcggacgatgatcttgataaattaatagcgacggtcacagccaat
gactacatttgcgcaatggcagggtgcaagaaatcgacccaattaatgcatgttgattgc
gaattctgtaaatctaggttctgctttacacacgggatgcaagaaattcatggttgtgga
gaagccgtgagaaacaaagagaggaaagagtttgttcgtcggaagccagaaaactgtaag
aaaacggacaaagataaatttgcaagaaagttgaagcagctggaggaggctcgaaaaccg
aaaaagaaggttgaaaagtag
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