Neodiprion fabricii: 124183060
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Entry
124183060 CDS
T08986
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
nfb
Neodiprion fabricii
Pathway
nfb03030
DNA replication
nfb03420
Nucleotide excision repair
nfb03430
Mismatch repair
nfb03440
Homologous recombination
nfb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124183060
03420 Nucleotide excision repair
124183060
03430 Mismatch repair
124183060
03440 Homologous recombination
124183060
03460 Fanconi anemia pathway
124183060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfb03000
]
124183060
03032 DNA replication proteins [BR:
nfb03032
]
124183060
03400 DNA repair and recombination proteins [BR:
nfb03400
]
124183060
Transcription factors [BR:
nfb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124183060
DNA replication proteins [BR:
nfb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124183060
DNA repair and recombination proteins [BR:
nfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124183060
MMR (mismatch excision repair)
124183060
DSBR (double strand breaks repair)
HR (homologous recombination)
124183060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
T2SSC
Motif
Other DBs
NCBI-GeneID:
124183060
NCBI-ProteinID:
XP_046427013
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All DBs
Position
5:2141547..2147134
Genome browser
AA seq
607 aa
AA seq
DB search
MYELSEGALDQIMNGVEVEKPILQILGHKKLQSASTQERYRLLVSDGKRINSYAMLATQL
NSLITNDQLTEFSVCQVNRYAISMINNSGTQKRVMVILNIDVKIPGTEVGCKIGNPTQQD
GNVQNGDSTPAARLAAPVPKTNNSSNSVRPGRQQQSYLNDSVSSGAGIATTPIEALSPYQ
NRWVIRARVANKSAIKTWSNARGEGSLFSMDLVDETGEIRCTAFRDQCDKFYNMIEFGKI
YYISRCQLKPANKQFSNLKNEYEMTMTSETEVVPCHDDSDEIPTVKYDFAPISEIDGKEP
NAIIDVLGVCKSCSDITTVVARTTRKELKKRDVNLVDESNTMVTLTLWGTQADEFDGSSN
PVVAVKGARLAEFNGGKSLSTLNSSVLQIDPDIPEAHRLRGWYNTTGCTENVHTISKGLG
GGSGGMNGPWLTFKEAKDMQLGCRETPDYFIVKATINMIRTENSLYKACPTDDCKKKLID
QSNEMYRCEKCNRNYPNFKYRLLASINLADWTDNQWVTAFNDEAGKILGMTAQEIGELKD
NDDEAFLEKFGESAFKTFLLKLRVKMENYSDENRLKSTVVNVTPLDIKSYNNHLIAQIKE
LSNMGKA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaacttagtgaaggagccttggaccaaatcatgaacggtgtagaggtcgaaaaa
ccgattttacagatattgggacacaaaaagctgcaatcggcgagcactcaggagcgctat
cgcctcctagtttcagatggcaaaagaattaactcatacgcgatgttggctacacagcta
aactcgctgattaccaacgaccaactgactgagttttccgtatgccaagttaatcgatac
gcaattagtatgatcaacaattcaggaacacagaagagagtgatggtcatactcaacatt
gacgttaagattccgggcactgaagtgggctgcaaaataggaaatcctacccagcaagac
ggcaatgtacagaacggagattctactcctgctgcccgattagcagcgcctgtaccaaaa
actaataattcctcaaattctgttcgtcctggaagacagcagcaatcttatcttaatgat
tcagtatcctctggtgctggtatcgcaactacaccgatagaagccctgagtccttatcaa
aacaggtgggtaatcagagctagagtagccaataagtcagctataaaaacgtggagcaat
gcacgtggcgaaggttctctcttttctatggatttagtcgatgagactggcgagattcgc
tgcactgcattcagagatcaatgtgacaaattttacaacatgatcgagtttggcaaaatt
tactacatttcacgttgtcaactgaagccagcgaacaagcaattcagtaatttgaaaaat
gaatacgagatgacaatgacatccgaaacagaggttgttccttgtcacgacgattctgac
gagatcccaacagtgaagtacgattttgcaccaatcagtgaaattgatgggaaggagccg
aatgcaataattgatgtgcttggcgtttgcaaatcttgtagtgatatcacaactgtagtt
gcgaggactacaagaaaagagcttaagaagagggatgtcaatcttgttgacgaaagcaat
acaatggttactctcacattatggggaacccaggcggacgagtttgatggatcttctaat
cccgttgttgccgtgaaaggtgcacgtcttgccgaatttaatggtggaaaatctctgtct
acccttaactcgtcagtgctccagattgacccagacattcccgaagctcataggctccgt
ggttggtacaacacaactggatgcacagagaatgtgcataccatttctaaggggttgggc
ggtggcagtgggggaatgaatggtccgtggttgacgttcaaggaggctaaagacatgcag
ctgggctgcagagaaactcccgactacttcatcgtcaaggcaactatcaatatgataagg
accgaaaactctctttacaaagcgtgcccgaccgatgactgtaaaaaaaaacttatcgat
cagtccaatgaaatgtatcgttgtgaaaagtgtaacaggaactatccaaacttcaaatat
cgactgctggccagtatcaatctcgcagactggacagacaaccaatgggtaaccgcgttc
aatgacgaggctggaaagattttgggaatgacggcacaagaaattggtgaattgaaggat
aatgatgatgaagcgtttcttgaaaagttcggtgaatctgctttcaaaactttccttctc
aaattgagagtaaaaatggaaaactatagcgatgagaacagattgaagtccaccgtagtg
aatgtgacgccgctggatattaaaagctacaacaatcatctgatcgcgcaaattaaagaa
ctttccaacatgggcaaggcataa
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