KEGG   Neodiprion fabricii: 124183124
Entry
124183124         CDS       T08986                                 
Name
(RefSeq) pre-mRNA-processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
nfb  Neodiprion fabricii
Pathway
nfb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124183124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nfb03041]
    124183124
Spliceosome [BR:nfb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    124183124
 Complex C
   U5 SnRNP specific factors
    124183124
SSDB
Motif
Pfam: PRP1_N TPR_14 HAT_PRP39_N TPR_19 TPR_17 TPR_16 HAT_Syf1_CNRKL1_N Suf TPR_2 HAT_PRP39_C HAT_Syf1_CNRKL1_C TPR_8 TPR_11 TPR_1 TPR_15 TPR_6 ARM_TT21_2nd ARM_TT21_N NatA_aux_su TPR_CcmH_CycH ANAPC3 ARM_TT21 Iml2-TPR_39 FAT TPR_9 ChAPs ARM_TT21_5th TPR_MalT Wzy_C_2 TPR_Slam MIT Ribosomal_60s DUF4404
Other DBs
NCBI-GeneID: 124183124
NCBI-ProteinID: XP_046427152
LinkDB
Position
1:complement(26353897..26358015)
AA seq 931 aa
MAVPSASLSTRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPT
KRAKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRK
EYREKRLREELERYRQERPKIQQQFSDLKRELVNVSEDEWKNVPEVGDARNRKQRNPRAE
KFTPLPDSVLARNLGGDTSTSIDPSNGLASMMPGLATPGMLTPTGDLDLRKIGQARNTLM
NVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPA
WIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPPETAKAVIAQSVRHIPT
SVRIWIKAADLETEVKAKRRVYRKALEHIPNSVRLWKVAVELEEPEDARILLSRAVECCP
TSVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIDRAI
SSLNVNGVEINREHWFKEAMEAEKAGAVHCCQVIVKSIIGFGVEEEDRKHTWMEDAETCA
QQGALECARAVYAYALATFPSKKSIWLRAAYFEKSYGTRESLEALLQRAVAHCPKSEVLW
LMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARAS
APTPRVMMKSAKLEWALNNLEAALHLLQEAIETFEDFPKLWLMKAQIEEQQGNLDKALET
YNQAIKKCPTSVPLWCLLAQLEQRKGQVTKARSVLEKARLRNPKNAELWLEAIRNELKGG
GVRDMANTLMAKALQECPTSGLLWAEAIFMEARPQRKTKSVDALKKCEHDPHVLLAVSKL
FWCEHKISKCRDWFNRTVKIDPDLGDAWAYFYKFELLNGTEEQQEEVKKRCVAAEPHHGE
NWCRVSKNIVNWCLNTDQILTVVSKDLPIPI
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggcggtgccatcagcttcgctttcaacgcgaaataaaaagcattttctaggggttcca
gcacccttgggctatgtcgctggtgtcggaagaggtgcgacaggtttcacgactcgttct
gatatcggtccagctcgcgatgccaacgatgtttctgacgatcgacacgctccacctacc
aaaagagctaagaaaaaggaagaagaagaagaggatgaagaagatctcaacgattccaat
tatgacgaattctctgggtatggagggtcgctgtttagcaaggatccttatgacaaagat
gatgaagaagcagatgcaatttatgaagcgattgataaacgcatggatgaaaagcggaaa
gaatatcgtgaaaagcgcctaagagaagaacttgaacgttatcgccaagaacggcctaaa
atccagcaacagttttcagatctgaagcgtgaactggttaatgtgtctgaggatgaatgg
aaaaatgttcccgaagttggcgatgcgcgtaatagaaaacagcggaatccacgagctgaa
aagtttacgcctttgccagattctgttttagcaagaaacttgggcggagacacttctact
agtatagacccatctaatggactggcttccatgatgcctggcctagccacacctggtatg
ttgaccccaaccggtgacttggatttgcgaaaaattggacaagctagaaacacgcttatg
aatgtgaaactgaatcaagtatcagattctgttgagggtcaaacagttgttgatcccaaa
ggttacttaacggatctacaaagtatgattcctacttacggtggcgacatcaatgatata
aaaaaggccagattgcttttgaaatccgttcgtgaaacaaatcctaatcatcccccggct
tggatagcatctgcccgcttagaggaagttacgggtaaggttcaagcagcaagaaatctt
atcatgaagggctgtgaggtgaatccaacttctgaagacttgtggttagaagcggcgagg
cttcaacctccggaaacggcaaaggccgtaattgcccagtctgtacgtcacattccaaca
tctgttagaatctggatcaaagcagctgacttggaaacggaagttaaggcaaagagacgt
gtttatcgaaaagccttagagcatattccgaactcagtacggttgtggaaagtagctgtt
gagttggaagaaccagaagatgcaagaattttattgagtcgagcagttgagtgttgtcca
acaagtgtcgatttgtggctcgccttggcccgattggaaacttacgataacgcgagaaaa
gttcttaataaagctagagaaaatattccaacggatagacagatttggacgactgctgct
aaactagaagaagctaatggcaataagcatatggtagaaaagatcattgacagagcaatt
agttccttgaacgttaacggagttgaaattaacagagaacactggttcaaagaagctatg
gaagctgaaaaagctggtgctgtccattgttgtcaagtcattgtcaagtccatcatcggg
tttggagttgaggaagaagataggaaacacacttggatggaagatgcagaaacatgtgca
caacaaggtgctttggaatgtgctagagcagtgtatgcttatgctttagcaacttttccc
agcaaaaaatcgatctggctgcgtgcagcatattttgaaaagagttacggaacacgggag
tccttggaagcgctactccaacgggctgtggctcattgtcctaagagcgaagttctgtgg
ctcatgggtgccaagtctaaatggcttgctggtgacgtgccagcggcaagaggtattttg
tcattggctttccaagccaatccaaattctgaagagatttggttagctgcagtcaagctt
gagtcagagaactctgaatatgaacgtgccagaagattgttggcaaaagctagagcatca
gcgccaactcctagagttatgatgaaaagtgccaagcttgaatgggctcttaataatcta
gaagctgcactgcatctcctccaggaagctatagaaacttttgaggattttcccaagctt
tggttaatgaaggctcaaatagaagagcaacaagggaatcttgacaaagctctggaaaca
tataatcaagctatcaaaaaatgccccacttctgtgccattgtggtgtttgttagctcaa
cttgaacagcgtaaaggtcaagtgacaaaggctcgttctgtacttgaaaaagcacggctt
cgtaatccgaaaaatgcggagctttggctagaggctattcgaaatgaattgaaaggtgga
ggggtgcgagacatggctaatacgttgatggctaaagctctgcaagaatgtcctacgtct
ggtctgctgtgggctgaagcaatctttatggaagcacgaccacaacgaaaaacaaagagt
gttgatgcgttgaaaaaatgtgaacatgatccccatgttctactagcagtctccaagctt
ttttggtgtgagcataaaatatccaagtgcagagattggtttaatcgcaccgttaagata
gatcctgatttaggggatgcttgggcgtatttttataaatttgagcttttaaatggcact
gaggaacagcaagaggaagtcaaaaagcgatgtgtagccgcagaaccgcatcatggtgaa
aattggtgcagagtatctaaaaacattgtaaattggtgtttaaatactgaccaaatattg
accgtagtttctaaagacttaccgattcctatctaa

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