Neodiprion fabricii: 124183124
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Entry
124183124 CDS
T08986
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
nfb
Neodiprion fabricii
Pathway
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124183124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfb03041
]
124183124
Spliceosome [BR:
nfb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124183124
Complex C
U5 SnRNP specific factors
124183124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
TPR_17
TPR_16
HAT_Syf1_CNRKL1_N
Suf
TPR_2
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_8
TPR_11
TPR_1
TPR_15
TPR_6
ARM_TT21_2nd
ARM_TT21_N
NatA_aux_su
TPR_CcmH_CycH
ANAPC3
ARM_TT21
Iml2-TPR_39
FAT
TPR_9
ChAPs
ARM_TT21_5th
TPR_MalT
Wzy_C_2
TPR_Slam
MIT
Ribosomal_60s
DUF4404
Motif
Other DBs
NCBI-GeneID:
124183124
NCBI-ProteinID:
XP_046427152
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All DBs
Position
1:complement(26353897..26358015)
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AA seq
931 aa
AA seq
DB search
MAVPSASLSTRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPT
KRAKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRK
EYREKRLREELERYRQERPKIQQQFSDLKRELVNVSEDEWKNVPEVGDARNRKQRNPRAE
KFTPLPDSVLARNLGGDTSTSIDPSNGLASMMPGLATPGMLTPTGDLDLRKIGQARNTLM
NVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPA
WIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPPETAKAVIAQSVRHIPT
SVRIWIKAADLETEVKAKRRVYRKALEHIPNSVRLWKVAVELEEPEDARILLSRAVECCP
TSVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIDRAI
SSLNVNGVEINREHWFKEAMEAEKAGAVHCCQVIVKSIIGFGVEEEDRKHTWMEDAETCA
QQGALECARAVYAYALATFPSKKSIWLRAAYFEKSYGTRESLEALLQRAVAHCPKSEVLW
LMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARAS
APTPRVMMKSAKLEWALNNLEAALHLLQEAIETFEDFPKLWLMKAQIEEQQGNLDKALET
YNQAIKKCPTSVPLWCLLAQLEQRKGQVTKARSVLEKARLRNPKNAELWLEAIRNELKGG
GVRDMANTLMAKALQECPTSGLLWAEAIFMEARPQRKTKSVDALKKCEHDPHVLLAVSKL
FWCEHKISKCRDWFNRTVKIDPDLGDAWAYFYKFELLNGTEEQQEEVKKRCVAAEPHHGE
NWCRVSKNIVNWCLNTDQILTVVSKDLPIPI
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccatcagcttcgctttcaacgcgaaataaaaagcattttctaggggttcca
gcacccttgggctatgtcgctggtgtcggaagaggtgcgacaggtttcacgactcgttct
gatatcggtccagctcgcgatgccaacgatgtttctgacgatcgacacgctccacctacc
aaaagagctaagaaaaaggaagaagaagaagaggatgaagaagatctcaacgattccaat
tatgacgaattctctgggtatggagggtcgctgtttagcaaggatccttatgacaaagat
gatgaagaagcagatgcaatttatgaagcgattgataaacgcatggatgaaaagcggaaa
gaatatcgtgaaaagcgcctaagagaagaacttgaacgttatcgccaagaacggcctaaa
atccagcaacagttttcagatctgaagcgtgaactggttaatgtgtctgaggatgaatgg
aaaaatgttcccgaagttggcgatgcgcgtaatagaaaacagcggaatccacgagctgaa
aagtttacgcctttgccagattctgttttagcaagaaacttgggcggagacacttctact
agtatagacccatctaatggactggcttccatgatgcctggcctagccacacctggtatg
ttgaccccaaccggtgacttggatttgcgaaaaattggacaagctagaaacacgcttatg
aatgtgaaactgaatcaagtatcagattctgttgagggtcaaacagttgttgatcccaaa
ggttacttaacggatctacaaagtatgattcctacttacggtggcgacatcaatgatata
aaaaaggccagattgcttttgaaatccgttcgtgaaacaaatcctaatcatcccccggct
tggatagcatctgcccgcttagaggaagttacgggtaaggttcaagcagcaagaaatctt
atcatgaagggctgtgaggtgaatccaacttctgaagacttgtggttagaagcggcgagg
cttcaacctccggaaacggcaaaggccgtaattgcccagtctgtacgtcacattccaaca
tctgttagaatctggatcaaagcagctgacttggaaacggaagttaaggcaaagagacgt
gtttatcgaaaagccttagagcatattccgaactcagtacggttgtggaaagtagctgtt
gagttggaagaaccagaagatgcaagaattttattgagtcgagcagttgagtgttgtcca
acaagtgtcgatttgtggctcgccttggcccgattggaaacttacgataacgcgagaaaa
gttcttaataaagctagagaaaatattccaacggatagacagatttggacgactgctgct
aaactagaagaagctaatggcaataagcatatggtagaaaagatcattgacagagcaatt
agttccttgaacgttaacggagttgaaattaacagagaacactggttcaaagaagctatg
gaagctgaaaaagctggtgctgtccattgttgtcaagtcattgtcaagtccatcatcggg
tttggagttgaggaagaagataggaaacacacttggatggaagatgcagaaacatgtgca
caacaaggtgctttggaatgtgctagagcagtgtatgcttatgctttagcaacttttccc
agcaaaaaatcgatctggctgcgtgcagcatattttgaaaagagttacggaacacgggag
tccttggaagcgctactccaacgggctgtggctcattgtcctaagagcgaagttctgtgg
ctcatgggtgccaagtctaaatggcttgctggtgacgtgccagcggcaagaggtattttg
tcattggctttccaagccaatccaaattctgaagagatttggttagctgcagtcaagctt
gagtcagagaactctgaatatgaacgtgccagaagattgttggcaaaagctagagcatca
gcgccaactcctagagttatgatgaaaagtgccaagcttgaatgggctcttaataatcta
gaagctgcactgcatctcctccaggaagctatagaaacttttgaggattttcccaagctt
tggttaatgaaggctcaaatagaagagcaacaagggaatcttgacaaagctctggaaaca
tataatcaagctatcaaaaaatgccccacttctgtgccattgtggtgtttgttagctcaa
cttgaacagcgtaaaggtcaagtgacaaaggctcgttctgtacttgaaaaagcacggctt
cgtaatccgaaaaatgcggagctttggctagaggctattcgaaatgaattgaaaggtgga
ggggtgcgagacatggctaatacgttgatggctaaagctctgcaagaatgtcctacgtct
ggtctgctgtgggctgaagcaatctttatggaagcacgaccacaacgaaaaacaaagagt
gttgatgcgttgaaaaaatgtgaacatgatccccatgttctactagcagtctccaagctt
ttttggtgtgagcataaaatatccaagtgcagagattggtttaatcgcaccgttaagata
gatcctgatttaggggatgcttgggcgtatttttataaatttgagcttttaaatggcact
gaggaacagcaagaggaagtcaaaaagcgatgtgtagccgcagaaccgcatcatggtgaa
aattggtgcagagtatctaaaaacattgtaaattggtgtttaaatactgaccaaatattg
accgtagtttctaaagacttaccgattcctatctaa
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