Neodiprion fabricii: 124183229
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Entry
124183229 CDS
T08986
Name
(RefSeq) RNA exonuclease 1 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124183229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfb03009
]
124183229
Ribosome biogenesis [BR:
nfb03009
]
Eukaryotic type
Pre-60S particles
RNases
124183229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
124183229
NCBI-ProteinID:
XP_046427384
LinkDB
All DBs
Position
5:26102538..26108801
Genome browser
AA seq
708 aa
AA seq
DB search
MKTPTGKQLQRIEKKRKKMAALLEITKLNDKDREAKALALKQAVDGTNFELTQEETLTNL
LSDQETSTEVSSIESLSRKRPCTRTLDDAAQGSTNSEPPTTEVESNEEPDPLANKKPRLS
GEEYANLKQELKERKQRLKVIPRFRLKNVGENASLNFNVKDEDRIPIFLSDVQHLLMYSL
LGHHSPYLPARWCLLEKYNKVAHTVVLVVEGLSLYHFSAYESIFTNITTNLTHQLELVTP
AVYGGSIVEELAAVPLTGTQSDRLIKLNWLVSEFGSLEAALQSTGDLVKLLKTVFPMQAA
DKLGVGDKSFKVHQNLPVTDKFPRTQLLLSPWQLVEENYPLPLKGELARKYEDYILTKDM
YVEATPRSPMFGLDCEMCRTTTGLLELTRISIVDERMNIIYETLVKPANEITDYLTRYSG
ITKELLHNVTTTLVEVQNALREILPPDAILVGQSLNSDLHTLKMMHPYIIDTSVIYNITG
DRYRKTKLQTLAREFLDERIQEGRRGHCPSEDSRASLKLAQLKLANSLDFGDAVLVGQKN
MEILKMNAEKRKSFKVIDRMELRNYATSIFNHVTKDKKTAAIIGTEDVMNEYSRYLKNSS
LSIMDDQNFDTTDQVRLVVAENNKHAVSRASNVLMEHALTLCHLRITEDQLKSEKIEKTF
RTVNKWMQKLWQHMAIHGLSCVVFGGQNNAANGACFLDIKKDVTVIGP
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaccgacgggaaaacaactacagagaatcgaaaagaaacgcaaaaaaatggcc
gcgcttctagagatcaccaaactcaacgacaaagatcgagaagctaaggcgctagccctg
aaacaagcggtagatggcacaaattttgaactaacgcaggaggagacactgacgaatcta
ttgagcgatcaagaaacgagcactgaagtctctagcatcgaaagtctgagcaggaaaaga
ccatgtacgagaacgttggatgatgctgcacaaggaagcactaattctgagccgccgaca
acagaggtggaaagcaatgaggaacctgatccccttgccaacaaaaaacctagattgagt
ggcgaagagtacgccaacctgaagcaagagctgaaggaaagaaaacagcggttgaaagtg
atccctcgattccgtttgaaaaacgttggggaaaatgcaagtctaaatttcaacgtcaag
gacgaagatagaattccaatatttctcagcgacgtgcaacatcttctgatgtactctttg
ctcggtcaccactctccgtatttgccggccagatggtgtttgcttgaaaagtataacaag
gtagcccatacggttgttctcgtagtcgaaggactgtcgttgtatcatttcagtgcctat
gagtctatattcactaacataacgacgaacctgacacatcaactcgaactggtcactcca
gctgtgtacggaggatcgatcgtcgaggagttggctgccgtccccctcacaggcactcaa
agtgatagactgatcaaactgaattggctggtttcagagtttggatcactggaagctgct
ttgcagagtaccggtgatctagtcaagctgttgaaaacagtgtttccaatgcaagctgca
gataagctcggtgtcggggataaatctttcaaggttcaccaaaacttgcctgtcaccgac
aagttcccaagaactcagctcctcttgtctccgtggcaattagtagaagaaaattatccg
ctgccactgaaaggcgagttagcgagaaaatatgaggactacattttaacaaaggatatg
tatgtcgaggctactccaagatctccaatgtttggtttggattgtgagatgtgtagaaca
acgactggtttacttgagctaactaggatatctatcgtggatgaaagaatgaatattatc
tatgaaacgctggtaaaaccggcgaatgagattaccgattatctcactcggtacagtggg
atcacaaaagagcttctccacaatgtcacaacaactttagtagaggtgcagaatgctttg
agggaaatattaccaccggacgctattctagtgggacaaagtttaaattctgatcttcac
actctcaagatgatgcatccttacatcatcgacacatctgtgatatacaatatcactggg
gacaggtatagaaaaaccaaactccaaacattagcgcgagagtttctcgatgaaagaatc
caggaaggacgacgaggacattgtccctccgaggactcaagggcttcactgaagttggca
cagctgaaattggcgaacagtctcgattttggtgatgcggtactggtcggtcagaagaat
atggaaattctgaaaatgaatgcggagaaaaggaaatcctttaaagtcatagacagaatg
gagctgagaaactacgcaacgtcaattttcaaccatgttaccaaagacaaaaagacagcg
gctatcattggtaccgaagacgtgatgaatgagtattctaggtatctcaaaaattcatct
ttgagcatcatggatgatcagaacttcgacacaaccgatcaggtgcgtcttgtagttgct
gagaacaataagcacgcggtatctcgagcctcgaacgtgttgatggagcacgccttaact
ctttgccacctacggatcacggaggatcaattaaagagcgagaagatagagaaaactttt
agaacagtgaataaatggatgcagaagctctggcagcacatggcgatccacggtctaagc
tgcgttgtgtttgggggtcaaaacaacgctgccaacggagcctgtttccttgatataaag
aaggatgtaacagtaatcgggccttag
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