Neodiprion fabricii: 124183263
Help
Entry
124183263 CDS
T08986
Name
(RefSeq) muscle calcium channel subunit alpha-1 isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfb04040
]
124183263
Ion channels [BR:
nfb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124183263
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
NCAPD3_N
T4SS_pilin
Motif
Other DBs
NCBI-GeneID:
124183263
NCBI-ProteinID:
XP_046427480
LinkDB
All DBs
Position
5:35337743..35414744
Genome browser
AA seq
2002 aa
AA seq
DB search
MSTGNGDAVATAAAPAASSSSSWGQHGGESAAKSQDTQPAPPSQTQTTPATAPNTKAQAP
KRPPRRSGKPLADRPIRALYCLPLKNPVRKMCIDVVEWKPFEWLILLTIFANCVALAVYT
PYPNSDSNSTNTYLEKIEYVFLVIFTVECVMKIIAYGFVAHPGAYLRNGWNLLDFTIVVI
GMISTAMVWFMKEGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSILRAMVPLLHIALLVL
FVIIIYAIIGLELFSGKMHKTCWNNRTGEMMDEPHPCSLEEAGFKCEDRFGADYICSKQF
WEGPNLGITNFDNFGLAMLTVFQCVTLEGWTNVLYDIEDAMGNSWQWIYFISMVILGAFF
VMNLILGVLSGEFSKEREKAKARGDFHKLREKQQIEDDLRGYLDWITQAEDIEPEAEEPQ
LMQDGKPKQQNEMESIDQLEGDEDVQQESFWTKKKRDLERVNRRMRRACRKAVKSQVFYW
LIIVLVFLNTVVLATEHYRQPQWLDNFQEVTNMFFIGLFTMEMMLKMYSLGFQGYFVSLF
NRFDCFVVIGSIGEMILTNTEVMQPLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSI
QSIASLLLLLFLFIVIFALLGMQVFGGKFNSPGSQEKPRSNFDSFWQSLLTVFQILTGED
WNQVMYEGIKAYGGVSGFGALACVYFIILFICGNYILLNVFLAIAVDNLADAESLTAIEK
EQEEEAEKNKSRSGSLIRDHGSEDEAEDGENGSGIEDEDDEEMEEEQEEEEEEDEDEEAE
QDPNETIEDYEVALDTETSEKGEDSNSRTNMRLQMESEDEDIGVRLRVFQEGGAGEGVTA
RPRRMSEFNMATKKQPIPAGSAFFIFSQTNRFRVFCHWLCNHTYFGNIILACILISSAML
AAEDPLSAETDRNNVLKSFDNFFTTVFAVEICLKMISYGFVIHEGAFCRSAFNLLDLLVV
CVSISSIYLPSAMAVLKIFRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTSL
LQFVFAVIGVQLFKYVVKCVIVAIKTIGNIMLVTYLLQFMFAVIGVQLFKGKFFRCNDRS
KMTELDCQGTYLAFDDGDINKPSVENRKWDQNTFHFDNVAKAMLTLFTVSTFEGWPALLQ
VSIDSNKEDNGPIHNFRPIVAVYYIVYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCEL
DKNQRNCIEFALKAKPVRRYIPKHRIQYKVWWFVTSQPFEYTIFTLIMINTVTLAMKFYE
QPQFYTDALDILNMIFTAVFALEFVFKLAAFKFKNYFGDAWNVFDFIIVLGSFIDIVYSE
VRGGGSSIISINFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIY
AVIGMQVFGKIALDDDTEIHRNNNFQTFPQSVLVLFRSATGESWQDIMMDCAARGNEVKC
DNRSDERNSTGCGSNIAFPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLD
EFIRLWSEYDPDAKGRIKHLDVVTLLRKISPPLGFGKLCPHRVACKRLVSMNMPLNSDGT
VLFNATLFAVVRTSLRIKTEGNIDDANAELRAVIKKIWKRTSPKLLDQVVPPPGVDDEVT
VGKFYATFLIQDYFRRFKKRKEQEMKEGDKDCHNTVTLQAGLRTLHEAGPELKRAISGNL
EELLDDNPEPTHRRNHSLFGSVWSSMRKGHHNFHRAKSLKVDSTVSKVSPTNSIDFLPYV
STKRAINDTQNQVTARSHQVVPNVVGRSFGDNAMNQMAADPRQIHAEENIPLRPLTVFGN
SSDIHQMNYQNSYKLIDGQSCGNYLHPKNEYVTWSGESNGNAGPDRLSHSLPGSPADRKP
NFDVIGSAESLVGRVLVEQGLGKYCDSDFVKYTSREMQEALDMTKEEMDHAAHLLLLNEQ
RGQNLSYQLQQSDQVPDGNLRPSLRQRDQHANRPRMQRQNDYMTSQQIATTYRQRQHEYQ
HPHRRHQQQPPQQQKQQQQSPS
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgggcaatggcgatgctgtggcgacggcagcagcacccgcagcctcatcgtcg
tcgtcatggggacaacacggcggggagagtgcggcgaaatcacaggatacgcaaccggca
ccaccttcccagactcaaacgacacccgcaacagcaccgaatactaaagcacaagcaccg
aaaagacctccccgacgtagcggaaaaccactagcggacagaccgattcgtgccctctac
tgcctaccgctgaaaaatcctgtgcggaagatgtgcatcgacgtcgtcgaatggaaaccc
ttcgaatggttgatcttgctgacgatattcgcaaactgcgtggccctcgccgtttatacg
ccgtacccgaacagcgattcaaattcaacgaatacctatttggaaaaaatcgagtacgtc
tttttggtaatatttacggtcgaatgcgttatgaaaatcattgcctacggatttgtggca
catcccggtgcctacctaagaaacgggtggaacttgcttgattttacgatcgtagtgatt
ggaatgatcagcacggcaatggtatggttcatgaaggaaggtttcgatgttaaggctcta
cgagcctttcgtgtattacgaccgttgcgtctagtttccggtgtgccaagtttacaggtg
gttctgaactcaatcttacgagcgatggttccattactacacatcgctttgcttgtacta
tttgtcataattatctatgcaatcattggtttggaactattctccgggaaaatgcacaaa
acttgctggaacaacagaacgggagaaatgatggatgagccacatccgtgcagcttggag
gaggctggattcaaatgcgaggatcgttttggggcagattatatttgcagcaaacaattt
tgggaaggaccaaatctcggtatcacaaacttcgataattttggcttagcgatgttgact
gtttttcaatgtgtcactctcgaaggatggacaaacgttctgtacgatatcgaagacgct
atgggaaacagctggcaatggatttacttcatctccatggttatacttggtgcctttttc
gtgatgaatttgattctcggtgtgttatccggtgaattctcaaaggagagagagaaggcg
aaggctcggggagatttccacaaacttcgagagaagcagcaaatcgaagatgatctcagg
gggtatctcgattggataacgcaggcggaggacattgaaccagaagccgaggagcctcag
ctgatgcaggacggcaagccgaaacaacaaaacgagatggaaagtattgatcagttggag
ggtgacgaagacgtccagcaagaatcgttctggaccaaaaagaagcgcgatttggaaagg
gtaaatcgacgcatgagacgagcctgcagaaaggcggtcaaatcccaagtcttctattgg
ctgattattgtcctcgttttcctgaacactgtcgtactagctactgaacactaccggcaa
ccccagtggcttgacaatttccaagaagtaacaaacatgttctttatcggactattcacc
atggaaatgatgttgaagatgtacagtcttgggtttcaaggttactttgtttcgctgttc
aatcggtttgattgtttcgtcgtgattggctccatcggcgagatgatactaacgaacacg
gaagtaatgcagcccctcggagtatcggtccttcgctgcgttcgactactcagagtattc
aaagtaaccaagtactggcgttcattgtcaaacttggttgcttcgctgctgaactcgatc
cagtccatcgcctctttattgctccttctttttctattcatcgtgatcttcgctttgcta
ggaatgcaggtatttggtggcaaattcaactcacccggctctcaagagaagccaagaagc
aactttgatagtttttggcagagtctgctcactgtcttccagatattgaccggggaagac
tggaaccaagtgatgtacgaaggtatcaaggcgtatggtggggtatctggattcggtgcg
ctggcatgcgtatacttcatcatcctcttcatctgtggaaactatatcttactgaatgtt
ttcttggctatagccgtcgacaatttggccgatgctgagtcattgaccgcaatcgagaaa
gaacaggaggaagaggctgagaaaaataaatctcgtagcggctcactgatacgagatcac
ggtagcgaagatgaagctgaagatggggagaatggcagcggtatcgaggatgaagatgat
gaagagatggaggaggagcaggaggaagaagaggaagaagacgaggacgaagaagctgaa
caagatccgaatgagacgattgaagactacgaagtcgcattggatacagaaacttcagag
aagggagaagattccaacagccgtactaatatgcgattacaaatggagtccgaagacgaa
gatataggagtgcgtttacgtgtgtttcaagaaggtggcgcaggagagggtgttacagca
cgacctcgtcgaatgtccgagttcaacatggcgactaaaaaacagccgattccagctggc
tctgccttctttatattctcacaaacaaacagattccgggtgttttgccactggctgtgc
aaccacacttatttcgggaatataatactggcctgcattttgatatcatcagcaatgctc
gccgctgaggatccgctgtctgcagaaacggaccgcaataacgtcctgaagagtttcgat
aatttcttcacaactgtgtttgcggttgaaatctgcctaaaaatgatttcttacggattc
gtgattcacgagggagcattctgtcgatctgcgttcaatctcctggacctgcttgtcgtc
tgcgtctccatttcgtctatatacctgccctccgctatggcggtgttgaaaatatttcgg
gtactccgagtactgaggcctctacgtgccatcaatcgtgccaaaggattaaagcacgta
gttcaatgcgtcatcgtagctgttaagactatcggaaacatagtcctcgtcaccagccta
ctgcagttcgtgttcgctgtcattggtgttcaactattcaagtacgtagtgaaatgcgtg
attgttgccattaaaactattggcaacattatgttggtcacctatctcctacagttcatg
tttgctgttatcggggtgcaactttttaagggtaaatttttccgctgcaacgaccgctcg
aaaatgacggaactggattgccaaggcacgtatctcgcgttcgacgacggtgatatcaat
aagccatcggttgagaatcgaaaatgggaccagaatacatttcactttgataacgttgct
aaagctatgctgactctgttcacggtgtcaacgttcgagggctggcccgcattactgcag
gtatccattgattcgaataaagaagacaacggacccatccacaactttcgaccaatagtt
gccgtttactacatcgtatatatcattatcattgcattttttatggtcaacatattcgta
ggctttgttatagtgacattccaaaacgagggtgagcaagaatacaagaattgcgaattg
gataagaatcagcgcaactgcatagagtttgcactaaaagcgaaaccggtacggcgttac
attcccaaacatcgtatacaatacaaagtttggtggttcgtcacatcacaaccgttcgaa
tacaccatattcaccctcattatgataaatacggtcactctggcgatgaaattctacgag
cagccacagttttacacggacgccttggacatactgaacatgattttcacagcagtcttt
gctcttgagttcgtgttcaagctagccgcattcaaattcaagaattacttcggagatgcc
tggaatgtctttgacttcatcattgtactaggaagcttcatagatatcgtgtactccgag
gtcagagggggcggatccagtatcatctccataaatttttttcgcttattccgcgtgatg
cgcttggtgaaactcttaagcagaggggaaggtatccgaactttgttatggacattcatc
aagtctttccaagctctaccatatgtcgctcttctgatcgtaatgctgttcttcatatat
gctgttatcgggatgcaggtattcggtaaaattgccctcgacgacgatacagagatacat
cgcaacaacaacttccaaacgtttccgcaatctgttctggtcctattcagatcggctaca
ggtgagtcttggcaggatatcatgatggattgtgcggcacgagggaacgaagtaaagtgt
gacaatagaagtgacgaaagaaattcgactggatgcgggtcaaacattgcgttcccgtac
tttatttctttttacgtactctgttcctttcttattatcaacctgttcgtagcagttata
atggataatttcgattacttgaccagagactggtctatacttggtccgcatcatctcgac
gagtttattagactgtggtccgaatacgatcccgacgccaagggccgtatcaagcatctt
gacgttgttactttgttacgtaaaatatcaccgccattgggatttggtaaactttgtccc
catagagttgcttgcaagcgattagtgtcgatgaacatgccccttaacagcgacggtact
gtattattcaacgcaaccttattcgcagttgtgcgaacttcactcagaataaaaactgaa
ggtaatatcgatgatgcaaacgcggagctgagggctgtaataaagaagatatggaagcga
accagtccgaaactattggaccaagtcgtaccacctcccggagtggacgacgaagttaca
gttggtaagttctacgccacgtttcttattcaagactacttccgacgcttcaaaaaacga
aaggaacaggaaatgaaagaaggtgacaaagactgtcacaacacggtaaccttgcaggct
ggtttgcgaacgcttcacgaagctggaccagaactaaagcgagcaatttctggcaacttg
gaagagctgctggacgataatcctgaaccaacgcacaggagaaatcactcattgtttggt
agcgtctggtccagtatgcgaaaagggcaccacaattttcaccgagccaaatcgttgaaa
gttgattcgaccgtttcaaaggtttcaccgaccaattcgattgactttttaccctacgta
tcgacgaaaagagccatcaacgatacccaaaatcaagtaactgccaggtcacatcaggtt
gtgccaaacgttgtcggtaggagcttcggtgacaacgccatgaaccagatggccgcagac
ccgaggcaaatacatgccgaagaaaatattcctctgcgaccactgacggtattcggaaat
tcttcggatatacaccagatgaactaccagaactcttacaaattaattgacgggcaaagt
tgcggcaactatctccacccgaaaaatgaatatgttacttggtctggcgagagtaatgga
aatgccggaccggatcgtctgtcgcacagtctaccggggagtccagcggatcgaaaacca
aactttgacgtcatcggcagcgcggaaagtctcgtcgggcgggtactcgttgagcaaggc
ctcggtaaatattgcgactctgacttcgtgaagtatacatctagggaaatgcaagaggcg
ttggatatgaccaaggaagagatggatcacgcggctcacctcctattactcaatgaacaa
aggggtcagaacctcagctatcaattacaacaatcggatcaagtgccagacggaaatctc
agaccgagtctcagacagcgtgatcaacatgcaaatcgtccccggatgcaacggcagaac
gattatatgacaagtcaacaaatagccacgacgtatcgtcaacggcaacatgagtaccaa
cacccacatcgtcgacatcagcaacagccgccacaacagcaaaagcaacaacaacaatca
ccgtcctaa
DBGET
integrated database retrieval system
