Neodiprion fabricii: 124183416
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Entry
124183416 CDS
T08986
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124183416
04121 Ubiquitin system [BR:
nfb04121
]
124183416
Enzymes [BR:
nfb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124183416
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124183416
Ubiquitin system [BR:
nfb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124183416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
ANCHR-like_BBOX
zf-B_box
Vgb_lyase
PQQ_2
Motif
Other DBs
NCBI-GeneID:
124183416
NCBI-ProteinID:
XP_046427832
LinkDB
All DBs
Position
5:8024647..8034824
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AA seq
672 aa
AA seq
DB search
MSGVLLDLIQLGVEADKFVEQDVGHTMASRSSLSPTWTFPSRNSPRWVTREVCGNCNQSS
SRNVPQVVAKCLDCTYLLCEPCLMAHQRGRLTRNHRIQLDTRSNTPSPSSAVTSYSPPPT
ITFYCDVHQEIIKLYCEPCKVVLCEVCVNKDHRGHFVYQLWWATRGGEFTPLHILNEICS
GISNILRGIKLVEHTDEDMDRWVIQADPFLRIRISEGFPILCEEREKLLTAIQRIKLMRD
ERLEVRTQALTKILLGLWDIFNRLREAIDQHTTNNPNELLCIKETGAKEVLQIRQYQNSV
VPRDDDWMSFLDSDFNLVNSFASVGPVTFGNPGPIGDHRSVRGRTAAIETPMGSSRIVSN
SPRHVIPHGRPVLGCNLVVSLKINRSLNTMGLRTVAIWGSEGNKDGELCRPWGVCCDKNG
YIIVADRSNNRIQIFKENGTFVRKFGTQGSGPGQFDRPAGVATDSQSHIVVADKDNHRIQ
ILTFEGLFLHAFGEKGSRPGQFNYPWDVAVNSEGQIVVSDTRNHRIQLFTHQGVYLGKFG
FENTTGPWKHFDSPRGVAFSPEGNIIVTDFNNHRLVVIPPNLGTARFLGGEGTALKQFLR
PQGVVVDDEGHIVVADSRNHRIQIFKPSGELLWRIGSSGKAPGELDRPAGITLTPNGAIV
VVDFGNNRIQIF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagtgttgttagatttgattcaattgggagttgaagctgataaattcgttgaa
caggacgtggggcatacaatggcctcacgaagtagtttgagtcccacgtggacatttcct
tctcgtaatagtcctaggtgggtcaccagggaggtctgtggcaactgcaatcaatcgagt
tccaggaatgttccccaagtggtggcaaagtgtctagattgcacgtaccttctttgcgaa
ccatgtctgatggctcatcaaaggggtcgtctgacaagaaatcacagaattcaacttgac
acaagaagcaatacaccaagtccatcttcagctgttacctcttactcacccccaccaaca
attaccttctattgcgatgttcatcaggaaattataaaactttactgcgagccttgtaaa
gtggtattatgtgaagtatgcgtaaacaaggatcacaggggtcattttgtgtaccaattg
tggtgggctactagaggtggtgaatttactccgctccatatattgaatgaaatttgcagt
ggaatctcaaacattctacgagggattaaactagtcgagcatactgacgaagatatggac
agatgggtgattcaggcagacccttttttgaggataaggatctctgaagggtttcctata
ctttgtgaagagcgagagaaattgctgactgcaattcagagaataaagctgatgagagac
gaaagactagaggttagaacacaagctcttacgaaaatactccttggactatgggatatt
tttaacagacttagggaagcaatcgatcaacacacgacaaataatccgaacgaacttttg
tgtatcaaggaaacgggtgccaaagaggtgcttcagattcgtcaatatcagaattctgta
gtacccagggacgacgactggatgtcattcctagattcagatttcaatttggtaaattca
ttcgcctccgtgggaccagtcacttttggaaatccaggccccataggagatcatcgatct
gttagaggtcggacagcggcaatagaaactcccatgggcagtagtaggatagtatccaac
tccccacggcatgtcatacctcatggtagacctgtgctaggatgcaatcttgtcgtatct
ttgaaaatcaatcgcagtttaaatactatgggattaagaacagttgctatttggggttca
gaagggaacaaagatggagagttatgcagaccctggggtgtttgctgcgacaagaatgga
tatatcatcgtagcagacagatcgaataatcgtattcaaatttttaaagaaaatggtact
tttgtaagaaaatttggtacccagggctctggtccgggtcaatttgatcgacccgccggt
gtagctacagactcgcaaagccacattgtggttgctgacaaagataatcatagaattcaa
attcttaccttcgaaggactatttctacatgcctttggtgaaaagggctctaggccaggc
caattcaattacccttgggatgtggctgttaattctgaaggccaaatagttgtctctgac
acacgaaatcatcgtattcaactattcacacaccaaggtgtatatttaggaaagtttggc
ttcgaaaataccactggtccttggaagcactttgattcgcctcgaggtgttgctttctct
ccagagggcaacataattgtaaccgacttcaacaatcaccggctagtcgttattccgccg
aacttgggaaccgcaaggttcttaggtggggaaggtactgctttaaagcaattcttgaga
ccacagggtgttgtggtagacgacgaagggcacatcgtagttgcagattctagaaatcac
aggatacagatatttaaaccgtcaggagagttattgtggaggataggaagttcgggtaaa
gcacctggcgaactcgatagacccgcgggcataacattaacacccaatggagcaatagtt
gtcgttgacttcggtaacaacagaattcaaatattctag
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