Neodiprion fabricii: 124183594
Help
Entry
124183594 CDS
T08986
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-B
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
nfb
Neodiprion fabricii
Pathway
nfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124183594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124183594
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124183594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_1
ARM_TT21
ANAPC3
TPR_8
RNPP_C
Motif
Other DBs
NCBI-GeneID:
124183594
NCBI-ProteinID:
XP_046428220
LinkDB
All DBs
Position
5:4256102..4259842
Genome browser
AA seq
692 aa
AA seq
DB search
MTEISESHNNDSTASVITDQERELAQNALTDFQKSAYSGCLSNLNKLEALRPKDLKVMHN
KVVTEYYKSDLKKTELFRKSLNAICGQISTANTTEAVDDVERCVMRYNQAVLLFHTKQYD
LALKVVNKLFTFVEPMEESLAHKVCLLLIKLHIVTNQPDAALSLLNYIESQFVSTDTSKI
TPTDKENAIKPIKEQKEKTDNVDAATDAFRIKLLKYKARIYLMTHQLKLCKKEWKALVAS
GTPVNVSSILLKGNLEYLRGNYRKAIKILNSISADGLEYKSSGESAAVLYYNNMACLHHA
MGKPNLACFYLQKALQENKNAVESIQVKDADPFLSQPLYTLGGNKHYELMYSLGVSLLHA
RRAAQAFECFTESAQKLHNSPRLWLRMAECCIYSHKPTNEIDFNIHKRRKDLVQKVVGNG
IYRKIILASALSKDTKYHTEGLSCAIPQPTLEFGMLCLKNALFLLPNDNNELNLPSTPMA
GPQSVPMSLKPSHVLGGQHATQVSQATALEALNLKASVLAASAYISLCLGDNVVALEHAK
ALLGMSKLPGAYKMLGNLYAAESLILMNKINEAIEYLKPENIQDIDTFLPIPETLDKDKD
KSEEPFVTPVRSWYPNSLPTGKAVLQYNLAVAYAIRGELDKSGETLKQVWISKGPNCDVP
IHVIMLALYIELQLGNAHVSKSIIKQHCPQYQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgacagagatttcggagtcgcacaataacgatagtacagcctcggtgataactgaccag
gaacgtgaattggctcagaatgctttgaccgattttcagaaaagcgcttattcaggatgt
ctgagcaacttgaacaaactagaggcgttgagaccaaaagatctaaaagtaatgcacaac
aaagttgtcaccgagtattacaaaagtgatctgaaaaagactgagctgtttagaaaaagt
cttaatgctatatgtggtcaaataagtaccgccaacacaactgaagctgttgacgatgtc
gaaagatgcgtcatgcgatacaatcaggctgttcttctttttcacaccaaacaatatgac
ttggctcttaaagtagtcaacaagctgttcacattcgttgagccgatggaggagagtctg
gcgcataaagtctgtctgttactcataaagctgcacatcgttacaaatcaacctgatgca
gcattgtcgctgttaaattatattgaaagtcaatttgtctctacggatacgtccaagatc
acaccgacagacaaggagaacgctataaagcctatcaaagagcaaaaagagaagacggat
aatgttgacgcagcaacagatgcatttaggatcaaattgttaaagtacaaggcgagaatc
tacctcatgacccatcagctcaagttgtgtaagaaggagtggaaggctcttgttgcttcc
ggcacacctgttaacgtctcatctatacttctgaagggaaatttggaatatctgagaggg
aattacagaaaggctatcaaaatattaaattccatatctgcagatggtctggaatacaaa
agcagcggagaatcggcggcagttttatactataacaatatggcttgtctgcaccatgcg
atgggcaaaccaaacttggcttgtttctatttacaaaaagcgttacaagagaacaagaat
gcggttgaaagcatccaagttaaagatgctgatccgtttttgtcgcaaccgctttatact
cttggcggtaataagcattacgaattaatgtacagcttgggggtatcgctactacatgca
agacgtgcagcgcaggcatttgaatgtttcacagaatctgcgcaaaaactgcacaacagt
ccacgtctctggctgagaatggccgaatgctgtatatatagtcataagccaacgaatgaa
attgactttaatatacacaaacgtcgcaaggatctcgtgcaaaaagtagtcggtaacggc
atatacagaaaaattattttggcatcagctttatcaaaagacactaaataccacacagaa
ggattgtcttgcgccatacctcaacctactctagaatttggaatgttgtgtttgaaaaat
gctttatttcttctaccaaatgacaacaatgagttgaacttgccgtcgacaccaatggct
gggccgcaatctgttccaatgtctctgaagccgtctcatgtactaggtggccaacacgcg
actcaagtgtcgcaggcgacggcgctagaggcattgaatttaaaggcaagcgtacttgcg
gccagtgcctacatctctttgtgtcttggtgacaacgtcgtagctctagagcatgcaaag
gctttactcggtatgtcaaaattgcccggtgcgtataaaatgctaggaaatttatatgcc
gccgagagcttaattctcatgaataaaataaacgaggccattgagtacctaaagcctgag
aatattcaagatatagatacatttctaccaattcccgaaaccctggataaggataaagat
aaatccgaagaaccatttgtaacacctgtgagaagttggtaccccaacagtcttcccaca
ggaaaagcagttcttcagtacaacttagcagtagcttacgcaattcgaggcgaactagat
aaatctggagaaactttaaagcaggtgtggatttctaagggtcctaattgcgacgttcca
atacatgttataatgttggcattatacatagaattgcaattaggcaatgcgcacgtgtca
aaatcaataataaagcagcattgtccgcaatatcaataa
DBGET
integrated database retrieval system
