Neodiprion fabricii: 124183701
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Entry
124183701 CDS
T08986
Name
(RefSeq) DNA polymerase beta-like isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124183701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfb03400
]
124183701
Enzymes [BR:
nfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124183701
DNA repair and recombination proteins [BR:
nfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
124183701
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
124183701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
NTP_transf_2
HHH
HHH_3
Cdd1
MG3
HHH_2
DUF4332
Cytomega_UL20A
Autophagy_act_C
Cep57_CLD
Motif
Other DBs
NCBI-GeneID:
124183701
NCBI-ProteinID:
XP_046428498
LinkDB
All DBs
Position
5:25277777..25280796
Genome browser
AA seq
337 aa
AA seq
DB search
MSKRKAPDNADNLNSDLSDFLIELANYERNVSKNIYKYNAYRKAAGTLAALSYRVKNGEE
AKKLPGVGEKIAKKIDEFLQTGKLQKLEKINADGISAPINLMTRVSGIGPSKAKELVDAG
IKTLEDLRKNQDKLTHHQKIGLKYFQDFEQKIPREEVRRIEISLKSVIANLDKEYILTIC
GSYRRGKDESGDIDVLITHPKFTSESMDAKNKGGMLKNIVKHLEKEGIITETISIGNTKF
MGVCRDPAESSKPFRRLDIRVTPSDHYYCAVLYFTGSDLFNKNMRAHALKKKFTLNEYTL
KHLTLEGLPGNAELITSEEDIFSKLGLPYKKPEERNS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgaaaggcacccgacaacgcagacaatctgaacagtgatctctccgatttt
ctgatagagctagcaaattacgagcggaatgtcagtaaaaacatctacaagtataacgct
taccgtaaagctgctggaactttggctgcactatcataccgagtgaagaatggtgaagag
gcaaaaaagttgccaggggttggagagaagatcgcaaaaaaaattgatgagttccttcaa
accggaaaattacaaaaacttgaaaaaattaatgctgatggcatcagtgctcctataaac
ttgatgaccagggtatcaggaattggaccatcgaaggcaaaggaattggtagatgctggt
ataaagactttggaagacctgagaaaaaaccaagataaattaacacatcatcagaaaatt
ggtttaaagtactttcaagattttgaacagaaaattccaagggaagaggtgcggcgaatc
gagatcagtctcaaatcagtgattgctaatttagacaaagagtatatacttacaatctgt
ggtagttatagacgtggaaaggatgagagcggcgatattgacgtcttgatcacacatcca
aaattcacatccgaaagtatggatgcgaaaaataaaggcggtatgctaaaaaatattgtt
aaacatcttgaaaaggagggaataatcacagagactatctctatcggcaacacaaagttt
atgggtgtttgccgagatccagcagaatcgagtaaaccatttcgccgacttgatataaga
gttactcccagcgatcactactactgtgccgtattatattttaccggcagtgatttattc
aataaaaatatgcgggcacacgcacttaaaaagaaatttacgttgaacgagtataccttg
aaacatctaacattggaagggttaccagggaatgctgaattaatcacaagtgaagaggat
atcttcagtaaacttggacttccatacaaaaaaccagaagagaggaattcataa
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