Neodiprion fabricii: 124183749
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Entry
124183749 CDS
T08986
Name
(RefSeq) chondroitin sulfate proteoglycan 4 isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nfb00535
]
124183749
04091 Lectins [BR:
nfb04091
]
124183749
Proteoglycans [BR:
nfb00535
]
Cell surface proteoglycans
Others
124183749
Lectins [BR:
nfb04091
]
C-Type lectins
Others
124183749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
Big_9
hEGF
Motif
Other DBs
NCBI-GeneID:
124183749
NCBI-ProteinID:
XP_046428638
LinkDB
All DBs
Position
5:24617683..24670112
Genome browser
AA seq
2399 aa
AA seq
DB search
MNVTAKNFLPASMRIGVRVSGNVSHNGKRIGATKMYVSLFRLLLGHPMSRASGDSSSSPC
EIKFTSQTLRQGIPITGSPSLPALSFYGASYIHLPVQEARGASDVSFKFRTHLPDAMLLL
AAGKTDYCLVKLVAGRLKVHINLGAGESEIASPRGLTLNDLSWHEVNLTRREANITLQID
VIHATRSVLPGRFFELNIHYGVYIGGQGDFNELFLGHTEYLRGCMADIHYNGANVVESAR
LRKGQSVATGVAWGCSTEFDASRDTEISFVEDGAFTAIPKPIPRTGTRWELDLKTVTESG
LLLYNAGQSLRADYLGVEIYERKIRLLMNTGNGPTELIHGTTVADGKWHHVIVEFDPNVI
GISVDSSAKTLALPKGSRYLDLAGTLYIGGTELNQRAKALGKGLKSGDVSYKGCIRKMLL
DNKPLGLPDVKVSQGIVVGCVWGFPCVEAEPCVDGASCSQLGVNSFKCSCDQALCIKPSY
AEDYKVYSSANLPVDLEILSLSPLMVSEGDHVLVTSQNIAMILDIAKYGVEETGVIFTLI
TPPSHGTLALDLLNTKSDHTFTLQEINQDKIQYMHDGSESTEDSMILELKLLAGASYTLP
GYLQGRLRFPLHVNVTPVNDPPLLEIPTAKVLRLAQGTRKVLSKELVWAVDADTPLQSLV
YTVLRGDMDAGHVERLTYPTKPIDSFSQAELQQGLIAYVHRGNAKSNAMLGLQVSDGIES
SQPAYLRVSAYPLQIKLQYNTGLVVVHRSFSHLTPANLSFITNSDDSSIEIRYDIVSPAQ
FGTIQKFKDVSGSWSNVDHFTSKDVELDWVRYLHNVGSPSQDEFKFQASVREVRTQHTFD
FRITFIDLELKESRRLPVNFTNSIEVVVGSQNLKFQTNPLTTPVNKIVFTIEESPKYGEL
FLTKKAVLKGDTFTQEDLDAGRLRYKLLRKSFSNINDEMVFRVKAPQCVEIASSLLIRYS
LQRNGNGPETVNRLRVNEGGSVPLKIMRFDGKNYGVTSLTYNVTVTPLHGWLKVVNDTFY
SNPRRNATYFTSSELAAELVHYVHDDTETPEDTFAYVAISSERENFMYVGNFHVEVAMRN
DNPPTRLNARVFHVVLNGERILTNKVLEYIDADLDTKPSDIVYSRRDAANGGLYKVTNPP
VQIYEFTQQDVNRHQILFRHHGEETGKVELGVTDGHFYTAGVLEVQASPPYVNPVPTNSS
VVKFNESTTLTTAVLQIETNVNANDSEIIYTVIEKPRHGVLLKRDKETTTFTQDDLAHGE
VSYKHQGGSLTKDSFKFRVSAKKTEAEGHLTVKVYPESYWEPLIVANNQTVLVEEATSVL
LSKKHLEVMHPKISPGQITYLVKERPRFGNLELQSPDQEHSDEARDDYVVTSFEQSTINE
GKLHYVQSEPNQTQDSFTFDVTNGITWLRDLALNFVVIPDKMYLASGNLSVVEGKSVVLD
ESDFPVITEYYAGKVTDYRVIEKPKHGTLIDSTKNSLVKKFPQKHLAAGVIMYRHSDDET
LNDSLRLVAIAGEKTSEPFELGFKVIPVNDEIPFLVNKTTLNVWQGGSVFITSKNLATLD
NDTEPANLQYHVTSIRNGFISLKQFKKLEIRNFTQQHINNMEIMFTHTNESDAEFIFTID
DGVHTTSNYTMLVVTREVRLSVKNNNPLNVFPLTRKPISADLLFIDSTDGNRKIKYIVRS
GPHLGRIIMETSEGIWLEVDRFSQSDLNHSKVIYEHTKQFMDLSANDSFVFDVEAHFAKP
VLNQLFQIEISVSSGGLDRYISAESVRVEEGGSGKVIVNVTGIVKFLQAKAGLENPTVIT
RLATHPSHGHVMLLPDLNVTTFTLPEIEGGKVAYFHDHSDTTEDHIHFSVYLTPGHILLC
NTTVPVIVTPINDEPFKLVTNAPFVSVVRNQNQTITRENLLTTDPDTDPQELSYDVISGP
TYGRLLLLPQDQNSSEVHQVNKFSQHDVDSNRLVYEHSGPLQAASFYFRVSDGRFNPVYR
VLNFHVLPIRLNVTVVGPVSLQQGSNVALISEDNIKLETNARQDLVTYNVTKAPKFGTIY
VRDAAAVSFRHTDLLSKSVMFMQTDMTVSNDSLELAAQLSDFEAKHVVIDVIVEPLMIVN
PMVAIAGERNRLDLRYMDATPLAKLTSSNPVFLVTRKPKYARIKKIIRSSGDRKGTRERE
VSKFAHQELISGLIYVVCKKMPALEIEGTPDSFGFVLAASIFQPAAGNFNFRIKYNVDDF
NMTLGSPMDPVGHEGEMAIAPNMSNDYLLILGMLLGVFLLGVVVIITIRCRHNRYKHADD
NKTEPSPGVGVMPLPRPPDHLMPATPHLKRFGNDHDGITGSSTPLPVLPSMPATLPQCKV
IPLSPLDSIAGSEVDVSSRYPYGVPDGDEWSSFDTSDLPCPSATTPRANPLLRRNQYWV
NT seq
7200 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaccgcaaaaaacttcttacctgcgtcgatgagaatcggtgtacgagtgtct
ggcaacgtcagccacaatgggaagagaattggtgcaaccaagatgtacgtcagccttttc
cgattgttgctcggccaccccatgtccagagcttctggtgactcgtcctcttcaccctgc
gagataaaattcacgagtcagacactccggcaaggaattccgataaccggttctccatcc
cttccagcattatcgttctatggagcgagttacattcacctcccggtccaggaagcgcgg
ggtgcatcggacgtcagtttcaaatttcgaacgcatttacccgacgcaatgttgctcctg
gccgctgggaagaccgactactgtttggtgaagctggttgccggtcgactgaaggttcac
atcaaccttggagctggcgagagtgagatagccagtccacgagggctcaccttgaacgac
ctcagctggcacgaggtgaacctgacgcggagggaggctaacatcaccctccagatagac
gtaatacacgcgacccggtcggtcctacccggccggtttttcgaactcaacattcactac
ggtgtctacattggagggcagggcgacttcaacgaactatttttaggccatacggagtat
ctaaggggttgcatggcggacatacactacaacggtgcgaacgtcgtggagtctgcaagg
ctgaggaagggtcagtcggtggcaacaggcgttgcctgggggtgttcaaccgagtttgac
gcgagccgagatacggagataagttttgttgaggatggagcattcacagcgattcccaaa
ccgatacctcggactggtacgagatgggaattggacttgaaaactgtcaccgagagcgga
ctgcttctctacaacgccgggcaatctcttcgcgccgattatctcggagtcgagatatac
gagagaaagatacgactgttgatgaacaccggaaacgggccgaccgaattgatacacggc
acgacagtggccgacgggaagtggcaccatgtaatcgtcgaattcgacccgaacgtcatc
gggatcagcgtcgattcttcggcgaaaactctggcgctgcccaagggcagcaggtacctt
gatctagctggtaccttgtacatcggaggaacggaactcaatcagagagccaaggcactt
ggcaaagggctcaagtccggagacgttagttacaaggggtgtatcaggaagatgctactc
gacaacaaacccctcggacttccggacgtcaaggtcagccagggcatcgtcgtcggatgt
gtttggggattcccctgcgtcgaggccgaaccctgcgtcgatggcgcttcttgctcccag
cttggcgtcaactcgttcaagtgctcgtgtgaccaggcactgtgtattaaaccaagctat
gccgaggactacaaggtgtactcaagcgcaaaccttccagtggatttagaaattctatca
ttaagccctttgatggtatccgagggtgatcacgttctcgtaacaagtcagaacatcgca
atgatcttagatatagcaaaatacggagttgaagaaacgggcgttatttttaccctgatc
acaccgccgtcgcacggaaccctggccctcgatcttctcaataccaaatccgaccatacc
ttcactctgcaagaaataaaccaagacaagatccagtacatgcacgacggcagcgagagt
acggaggacagcatgattcttgagctgaaactactcgctggtgccagctacactttgcca
ggttatttacagggtcgcctgaggttcccactgcacgtaaacgtcacccccgttaacgac
cctccactcttggagattcctactgcaaaagtccttcgattggctcaaggaacaagaaaa
gtactcagcaaagaactagtgtgggctgtagacgccgacacgccacttcaaagccttgtt
tacaccgttcttcgaggagacatggatgcaggacatgtggaacgtttgacttatccaaca
aaaccgatcgacagcttttctcaggcggaattgcaacagggactaatcgcctatgttcac
agagggaatgcaaaatcgaacgcgatgctcggactccaggtgagcgacggtatcgagagc
agtcagccagcttatttgagagtctcagcgtacccactgcaaataaagcttcaatataat
acaggcttagtggtggtccatcggtcgttttctcatctgacgccggcgaatctatccttc
ataacaaactccgatgattccagtatcgaaatacggtacgacattgttagtccggcacag
tttgggacaatacaaaagttcaaggacgtctccggctcctggagcaatgtcgatcacttc
accagcaaggatgttgagctggactgggtgcggtatcttcataacgtaggcagcccatct
caggatgagtttaagtttcaagcaagcgtaagggaggtcagaactcagcataccttcgac
ttcaggatcacgttcattgacctggaattgaaagagtccaggcgactgcccgtaaatttt
accaattccatcgaggttgttgtaggctcgcagaatctgaaatttcaaacgaaccccttg
accaccccagtcaataagatcgtattcaccattgaggaatcaccaaagtatggggaactg
tttttgactaaaaaagcagtgttgaaaggcgatacattcacccaggaagatctcgacgcc
ggaagactaagatacaaactcctaaggaaatctttctccaacatcaacgatgagatggtg
ttcagagtgaaggcgccacagtgcgtggagatcgcgtcctcacttcttatcagatacagc
ctgcagagaaacggaaacggacctgaaacggtcaacagattaagggtgaacgagggaggc
agcgtaccattgaagataatgcgtttcgatggtaaaaattacggcgttacttcgctaact
tacaacgtaacggtcacccctttacacggctggctaaaggtcgtcaatgatacattttat
tcaaacccgaggcgaaatgctacgtatttcacgtccagcgaactggccgccgagcttgta
cactatgttcatgatgatacggagactccggaggatacttttgcgtatgtggccatttcc
tcagagcgagagaacttcatgtacgtaggcaattttcacgttgaagtggcaatgagaaac
gacaatccgccaacacgactcaacgccagagtgtttcacgttgttctcaacggcgaacga
attctcactaacaaagtactcgagtacattgacgctgatctcgatacgaaaccttcggac
atcgtctactcgaggcgggacgcggcaaacgggggactctacaaagtgaccaatcctccg
gtacaaatatacgaattcacgcagcaggacgttaaccggcatcaaatactcttcagacac
catggcgaggagacgggaaaagtcgagttaggtgtcaccgacgggcatttctacaccgct
ggagtcctcgaggtccaggcgagcccgccgtatgttaatcctgtaccaaccaatagctcg
gtggtcaaatttaacgaatcgacgactctgactacagcggtgcttcagattgagacaaac
gtgaatgccaatgacagcgagataatttacaccgtgatagagaaaccgagacacggtgtg
ttgctcaaacgcgacaaggagacgactacgttcactcaagatgatctagctcacggagaa
gttagctataaacaccaaggtggctccctgaccaaagatagcttcaagtttcgcgtttcc
gcaaaaaaaactgaggctgaaggccatcttaccgtcaaagtttacccggagagctattgg
gaaccactcatcgtcgccaacaatcaaacggttctcgtcgaggaagcgacgagtgttctg
ctgtctaagaaacacctggaagttatgcatccaaaaatatccccgggtcagataacatat
ctggttaaagaaagacctcgatttggaaatcttgaactccagtctcctgatcaggaacac
agcgacgaggctagggacgattacgttgtcaccagctttgagcaaagtactattaatgag
ggtaaactgcactatgtccagtcggaaccgaaccaaactcaggacagctttacgtttgac
gttacaaatgggataacgtggctccgagacctcgccctcaacttcgttgtcatccctgac
aagatgtacctagcaagcgggaacttgagtgtcgtcgagggaaagagcgtcgttttagac
gagtcagatttcccagtgataacggaatactatgcgggaaaggtgacggactacagagtt
attgaaaaaccaaagcacggtaccctgattgattctacgaaaaattcactggtgaagaag
tttccgcaaaaacaccttgctgctggtgtcataatgtatcgacattcggatgatgaaact
ctgaacgatagtcttagacttgtcgccattgccggtgaaaaaaccagcgaaccctttgag
cttggattcaaagtaattcccgttaacgacgaaattccgtttctggttaataagaccact
ttgaatgtatggcaaggtggctctgtctttataacgtccaagaatcttgctactcttgat
aacgatactgaaccggcaaatttacagtatcatgtaaccagcatcagaaatggatttatc
tcactgaagcagtttaagaaattggaaattcgtaattttactcaacagcatatcaacaac
atggaaataatgttcacacatacgaacgaatcagatgctgaatttatcttcacgattgac
gatggggttcatactacaagtaactacacgatgctggttgtaacgcgagaagtccgtctc
tcggtgaagaacaataatccattaaacgtgtttccattaacaaggaaaccgatatctgcg
gacctactctttattgatagtacggatggcaatcgtaaaataaaatacattgtcagaagc
gggccgcatctcgggaggataatcatggaaacgagcgaggggatatggctcgaggttgac
aggttttctcagagcgatttaaatcacagcaaagtaatttacgaacacaccaaacaattc
atggatctctctgccaacgactccttcgtcttcgacgtagaggcacatttcgctaagccg
gtactgaatcagctctttcaaattgagatatctgtatcaagcggcggacttgacagatac
atatcagccgaaagcgttcgcgtcgaggagggaggttcgggaaaggtgatagtgaacgtt
accggcattgttaagtttctgcaggcaaaagctggccttgaaaatcccacggtaataacc
agacttgccacacatcctagccacggccacgttatgcttttaccagacttaaatgtgacg
acattcacactgcctgaaatcgaaggaggaaaggtagcgtacttccatgatcactcggat
acgacggaagatcacattcacttctctgtgtacctgactccgggccacattctactgtgt
aacacgactgtcccagtaattgtaacgccgataaatgacgagcctttcaaactcgtaacc
aacgcgcctttcgtctctgttgtaagaaatcagaaccagacaataaccagagaaaacttg
cttacgaccgatccggacacagaccctcaggaactatcctacgacgttatatctggccca
acttacggcaggcttcttctgcttccccaagatcaaaattcatccgaagttcatcaggtg
aacaagttcagccagcacgatgttgactcaaatcgtctcgtctatgagcactccggcccg
ttacaagcggcttcgttttactttagggtatctgatgggagattcaacccggtctacagg
gtattaaactttcacgttctcccaatccgtttgaacgtaactgtcgtcggccctgtcagc
ctccagcagggctctaacgtagctctgatatcagaggacaacataaaactagaaactaac
gcgaggcaggatttggtcacctacaatgtaacaaaggcaccgaagttcggcaccatatac
gtcagggacgctgcggcggttagcttcaggcacacggatcttctgtcgaagagtgtgatg
ttcatgcagaccgacatgaccgtgtcgaatgatagcctcgagttagcggcacagctgagc
gattttgaggcaaaacacgtcgtcatcgacgtcattgtagaaccattgatgatcgtgaat
cccatggtggctatagcaggggagagaaatcggttggatctacgatacatggacgcgacg
ccactggcgaagctgacaagtagcaacccggtgttcctggtgacgaggaaaccgaagtat
gcacgaattaaaaagatcatcaggagttccggagataggaagggcacgcgggaacgagaa
gtgagcaagttcgcccatcaggagctgatttcgggcctgatatacgttgtatgtaaaaaa
atgcccgctctggaaatcgaagggacacccgacagcttcggctttgtgctggcagcatct
atatttcagcccgcggctggcaacttcaacttccgaataaaatataacgtcgacgatttc
aatatgaccttaggtagtccgatggacccggttgggcacgagggagaaatggcaatagcc
cccaacatgagcaacgactatctcctcatcctgggaatgctcttgggcgttttcctcctc
ggcgtagtcgtcataatcaccataaggtgtagacacaatcggtacaagcatgccgacgac
aacaagaccgaaccatcacccggggttggtgtaatgccgctacctagaccacccgatcat
cttatgcccgccactccgcacctcaaacgattcggtaatgatcatgatggcattacggga
agtagtaccccacttccagtcctaccatccatgccagccactcttcctcaatgcaaggta
atccctcttagccctttggacagcatcgctggctccgaggtcgacgtctcttcgaggtat
ccttacggtgtgccggacggtgacgagtggagcagctttgacacttccgatctgccgtgt
ccctcggctaccacacctagggccaatccgttactcaggagaaaccagtactgggtatag
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