Neodiprion fabricii: 124183772
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Entry
124183772 CDS
T08986
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
nfb
Neodiprion fabricii
Pathway
nfb03013
Nucleocytoplasmic transport
nfb03015
mRNA surveillance pathway
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124183772
09122 Translation
03013 Nucleocytoplasmic transport
124183772
03015 mRNA surveillance pathway
124183772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124183772
03041 Spliceosome [BR:
nfb03041
]
124183772
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
124183772
Spliceosome [BR:
nfb03041
]
Common components
Common spliceosomal components
Cap binding complex
124183772
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Dehydrin
Motif
Other DBs
NCBI-GeneID:
124183772
NCBI-ProteinID:
XP_046428689
LinkDB
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Position
5:25455540..25460208
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AA seq
794 aa
AA seq
DB search
MSRRRAHDDDDGYDRVYKKRRRVSENQEIEDRLESLILRVGEKSTSSLESNLEGLASVLE
ADLGVFRTKILRILTDCAIKMPEKCTIYTTLVGLLNAKNFNFGGEFVDYMVKNFKDSLKS
CKWNAARYSLRFLADLVNCHVLSCGSLMQLFDNMLDTANEDSVPQVRRDWYVFAVLSTLP
WVGRELYEKKEQELDHLMVTIEVFLNKRSKKHQPALKVWSSDTPHPQEEYLDCLWAQVRK
LRQDNWAEKHIPRPYLAFDSILCEALQHNLPTLLPPPHHESYTYPIPTVVFRMFDYTDCP
AEGPLLPGSHAIERFLIEEHLRQIIDNHFFERKDCAAQLLNFPYKAKIPLDYCIVEVMFG
ELFRLPSPKHLEICYGSILIELCKLQPSTMPQVLAQATEILFRRIDSMAAAAFDRFVWWF
AYHLSNFQFRWSWEDWDSCLQRDPEHPRPKFIKEVLLKALRLSYFQRIRDMMPETYAELI
PLPPEPIYKYTSEGASTLPGTSAAHELVVSIRRKCTPEEVLTVLNTLPGQGDNEESNTFN
PLKIDVFVQTLLNLGSKSFSHSFAAIGKFHYVFKALAESEEAQICILRNMHALWKNHYQM
MVVLSDKFLKTGIIECSAIANWIFSREMTSEFTKLYIWEILHLTIRKKNKHVIKLNTEVT
EAREKLRRAESRSGSSSEDEDNTKDKSGERPSEDVVERMEEKLEAAQADQKNLFLIIFQR
FIMILSEHLVRCDTDGIDYNTHWYRWTIGRLQQVFLAHHEQVQKYSSTLETLLFTPDLDP
HILDVFHQFVSLRA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaggagagcacatgacgatgacgatggatacgaccgcgtctataagaagcgg
aggagggtatcagagaatcaggaaattgaagatcgcctggaatcgcttatattgcgagtg
ggtgaaaagtcaacttcgtcattagaaagtaatttggaagggttagcgtctgtgctagaa
gcggatctcggtgtgtttcgtactaagattctccgaatattgactgattgcgctataaaa
atgccagagaaatgtacgatctacacaacgctggtggggctgctgaatgcaaagaatttc
aactttggtggtgaatttgttgactatatggtgaaaaattttaaagattctttaaaaagt
tgcaaatggaacgctgctagatattcgctccggtttcttgctgacttagtcaactgtcac
gtcttatcttgcgggtcgcttatgcagctcttcgataatatgttagacacggcaaatgag
gacagcgtacctcaagttagacgagactggtacgtttttgctgttctctcaaccctgccg
tgggttggtcgagagttatatgaaaagaaagagcaagaactggatcaccttatggtgacc
attgaagtatttttgaacaaacgaagtaagaaacatcaacctgctctaaaagtatggtcc
agtgacacacctcaccctcaggaagaatatttggactgtctctgggctcaagtacgaaaa
ttgaggcaggataattgggcggaaaaacacattcctcgaccatatcttgctttcgactct
attttatgtgaagctctacaacacaatcttccaacgcttctgcctccaccacaccatgaa
tcttacacgtacccgataccaactgttgtatttcgcatgtttgactatactgactgtcca
gcggaagggccactgctgcctggcagtcatgctatagagagatttcttatcgaagaacat
cttcggcaaattattgataatcacttctttgaaagaaaagattgcgcggcgcaattattg
aactttccatacaaagcaaaaattccacttgattattgtattgtggaagtaatgtttgga
gaactcttcagattaccatctccaaaacatttggaaatctgctatggatcgattttgatt
gaactttgtaagttgcaaccatcgactatgccacaggttttagcacaggctaccgaaatt
ttattccgtcgcatcgacagcatggctgcggcagcattcgatagatttgtttggtggttt
gcctatcatctgagcaacttccaatttcgttggtcatgggaagattgggactcatgcctc
cagcgtgaccctgaacatcctcggcctaaattcataaaagaagtgctgctgaaagcattg
agactatcctactttcaaagaattcgcgatatgatgccagaaacttacgccgaactgatc
cctttgcctccagaaccaatttacaagtacacttccgaaggcgcaagcacacttcctgga
acttctgcagcccatgaactagttgtttcaatacgccgcaaatgcaccccggaagaagta
ttgaccgttttgaataccttaccaggtcaaggagacaatgaggaatcaaacacattcaat
ccgttgaaaattgacgtatttgtacagacgttgcttaacctggggtcaaagagcttcagc
cacagtttcgccgctattggaaagtttcattatgtattcaaggctctggccgaatcagag
gaggcacaaatatgcattctaagaaatatgcatgccctatggaaaaatcattatcaaatg
atggttgtactctcagacaaattcttaaagactggaataattgaatgcagtgctatagcc
aattggatattttctcgggaaatgacatctgaatttactaaactctacatctgggaaatt
cttcatttgacgatccgtaaaaagaataaacatgtcattaaactgaacacagaagtgacg
gaggccagagaaaagttacgaagggcggaaagtagatctggatcgtcttcggaagatgag
gacaatactaaagataagtcgggagaaagaccatctgaagacgttgtagagcgaatggaa
gaaaaattggaagctgctcaagcagatcaaaagaatttattcctcatcatttttcagcgt
tttattatgattctttccgaacatcttgttagatgtgatacagatggcatcgattacaat
actcactggtacagatggactattggaaggttgcagcaggtatttttggctcatcacgaa
caagtacaaaaatactcgtcaacactggaaacacttttgttcacgccagatctggatcca
cacattcttgacgtatttcaccagtttgtttcgttacgtgcataa
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