Neodiprion fabricii: 124183845 Help Entry 124183845         CDS       T08986                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism nfb  Neodiprion fabricii Pathway nfb03030   DNA replication nfb03410   Base excision repair nfb03420   Nucleotide excision repair nfb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:nfb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     124183845    03410 Base excision repair     124183845    03420 Nucleotide excision repair     124183845    03430 Mismatch repair     124183845  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:nfb03032]     124183845    03400 DNA repair and recombination proteins [BR:nfb03400]     124183845 Enzymes [BR:nfb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      124183845     6.5.1.6  DNA ligase (ATP or NAD+)      124183845     6.5.1.7  DNA ligase (ATP, ADP or GTP)      124183845 DNA replication proteins [BR:nfb03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     124183845  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      124183845 DNA repair and recombination proteins [BR:nfb03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      124183845    NER (nucleotide excision repair)     Other NER factors      124183845    MMR (mismatch excision repair)     Other MMR factors      124183845 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme HVO_A0114 Motif Other DBs NCBI-GeneID:  124183845 NCBI-ProteinID:  XP_046428867 LinkDB All DBs Position 5:1006512..1011852 Genome browser AA seq 916 aa AA seqDB search MLKFNVIFTLFKSRTIILEQPVISLTRLLDSNGVSCSSFNWLHIGNSLSKKKDDDDSPSV AKRKRVDSSNGTESISPPPAKKISTSVNDAPSTSSSQKSPGSIQRRQIGKENENKSVVKD EDVKKTTPKRTTTKNDNRNSKNKINQSAKKRARIIPQDDSSDDDVHLALPDSPIKPDAKA FLKSPVKKEMESEDDISPKSKHASEEEEAESPKKAKVEKPKASPATKKSPKNVHSFFAVK QKNGSKPEEKKTSNGSAKTQTYSYNPGASKYHPIDDASWKQNEKVPYIALARTLEIIEST SARLKMIEFLSNYLRSVIVLSPDDFLASVYLCLNQLGPAYEGMELGIAETTLMRAIAQCT GRTVAQIKSDVQEVGDLGIVAEESRSNQRMMFQPAPLTVSGVFNKLKEISQMTGQASMTK KVDKIQSLFVACRFSEARYFIRSLSGKLRIGLAEQSILQAIALACATTPPGQDYPPKILD ASEKRSAESFKQDYDKKALILKTTYCECPNYDLIIPVILKEGINALPERCKLTPGIPLKP MLAHPTKGVQEVLTRFDGLKFTCEWKYDGERAQIHIAEDNHVSIYSRNQENNTSKYPDII GRLGNTRGENVKSCVLDCEAVAWDRENEQILPFQVLITRKRKDASEANIKVQVCVFMFDL LYLNGTSLVKEPFIKRRELLKENFKEVKGEWQFATSLDTTTMEEVQDFLDESVKGNCEGL MVKTLEQDATYEIAKRSRNWLKLKKDYLDGVGDTLDVVVIGGYIGKGKRTGTYGGFLLAC YDQENEEYQSICKIGTGFSDEDLQTHTEFLKKHIISQPKSYYRYDVSHEPDHWFEPVQVW EIKCADLSLSPVHRAAAGIIDPEKGISLRFPRFIGIRNDKNCEDATSSQQVADLYNNQEH IKNQTSTTKVAEEDFY NT seq 2751 nt NT seq  +upstreamnt  +downstreamnt atgctcaagtttaacgtgattttcacgctgtttaaatctcgtaccattatcctcgagcaa ccggttatctcgttaacacgactgctagatagtaacggtgtatcgtgttcttcattcaat tggttacatatcggtaatagtttgtccaagaagaaagatgacgacgacagtccttcagtt gctaaaaggaaacgagtggacagttctaatggcactgaatctataagcccgccacctgcg aaaaaaatcagtactagtgtcaacgatgcaccatctacctcatcgtcacaaaaatctcct ggatcaattcagcgtagacaaataggaaaagaaaatgagaacaaatctgttgtcaaagat gaggatgtcaagaaaactacacccaagagaaccacgacaaaaaatgataatcgtaattct aaaaacaaaattaatcagagtgccaaaaaacgagcgagaataatccctcaggatgattct agtgacgacgacgttcacttggcactcccagatagtccaattaaaccagatgctaaagca tttctgaaaagtcctgttaaaaaagagatggaatcagaggatgatatatctccaaaaagt aaacatgcctcggaagaggaagaagcagaaagtcctaagaaagcaaaagtggaaaagcca aaagcctcgccagcgactaaaaagtctccgaaaaatgttcatagtttctttgcggtaaaa cagaagaacggttcaaaacctgaagagaagaaaactagtaatggtagcgccaaaacacag acttattcgtataacccaggtgcgtcaaaatatcacccgatcgacgacgctagttggaaa cagaatgaaaaagtaccgtacatcgcattggctcgcactttggaaattattgaaagcact agtgcgaggctgaaaatgattgaatttctctcaaattatttgcgatccgtcattgttctc agccctgatgatttcctagccagtgtttatctttgtttgaatcaactgggcccagcctac gaaggcatggagttgggaatagccgagaccacacttatgagagcaattgcacagtgtacc ggcagaactgttgcacagattaaatctgacgtccaagaagtcggagacttgggaatagta gctgaagaaagtcgatctaatcagcgaatgatgtttcagccggcacctctgactgtttct ggtgtgtttaataaattgaaagaaatctcacagatgacaggacaagcctccatgaccaaa aaggttgacaagattcaatctctgtttgtcgcatgtcgtttttctgaggcaagatacttt atacgttctttatctggaaaattgagaataggtctggctgagcagtctatcttacaggca atagctttggcctgtgccacaactccacctggtcaggattatcctccaaagattttggat gctagtgaaaaaagatctgccgagtcattcaaacaggattacgataaaaaagccctgata cttaaaactacatactgtgaatgtccgaattacgatctcataattcctgttatactaaag gaaggcataaatgctttaccagagcgatgtaaattaactcctggcattccacttaagcct atgctggcacacccaacgaaaggtgttcaagaagtcttgacaagattcgacggactgaaa tttacttgtgaatggaaatatgatggcgaaagagcgcagattcatattgctgaggacaat cacgtgtcaatttacagcagaaatcaagaaaataataccagtaaatatccggacattatt ggaagattgggcaatacacgtggggaaaacgttaaaagttgtgtattggattgcgaagct gttgcttgggacagagaaaatgagcagattttgccattccaagtgttaatcacgaggaaa cggaaggatgcaagtgaggcgaatatcaaagtacaggtttgtgttttcatgtttgatctg ctctatttgaacggcacatcactggtgaaggaacccttcataaaacgtagagaattgctg aaagaaaatttcaaggaagttaagggggaatggcaattcgcaacaagtcttgatacaacg actatggaagaggtccaagactttctagatgaatctgtaaaaggaaactgcgagggtttg atggtaaaaacattggagcaagatgcaacgtatgagatagctaaaagatctcgcaactgg ttgaagttgaaaaaggattatttagatggggtgggagatacgctggacgtagtagtgatc ggaggttacattggaaagggaaagaggactggtacttatggggggtttttattggcttgt tatgaccaagagaatgaagagtatcaaagcatctgtaagattggcactgggttcagtgac gaagatcttcaaacgcatacagaattcttaaagaagcatataatctcgcagcctaaatct tactaccgatatgacgttagccatgaacctgaccactggttcgaacctgtccaagtttgg gaaataaaatgtgccgatctctccctctcacctgtacacagagctgccgctggcattatt gatccagagaagggtatatctctgcggtttccgcgatttataggtatacgtaatgacaaa aattgcgaggatgcaacatcatctcaacaagttgctgatttgtacaataaccaggaacat attaaaaatcaaacaagtacgacaaaggttgctgaagaagatttttactag

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