Neodiprion fabricii: 124184058
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Entry
124184058 CDS
T08986
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124184058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfb03400
]
124184058
Enzymes [BR:
nfb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
124184058
DNA repair and recombination proteins [BR:
nfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124184058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_5
DUF676
Motif
Other DBs
NCBI-GeneID:
124184058
NCBI-ProteinID:
XP_046429387
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Position
5:2219417..2220965
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AA seq
351 aa
AA seq
DB search
MINKLGKMSRVINTIPGSTMHNISFSESELGLGLTLTGGQSFRWVEVDGAQTFRGIFAGR
VWTLKQNKTHLQYRVHGPLESDPKNRQILSRYLRKEISLKHNVRKWSAVDPHFKKAWETV
KGVRILNQDIVENLFAFICSSNNNIIRISGMVDKLCRFFGKKLCCIDDKQYYDFPTIESL
AEKNVEMILKEAGFGYRAGYIANTAKRLIELGGETWLKQLHKDTDQSYPIAREKLITLPG
IGPKVADCICLMSLGYLEAIPVDTHIFQVARARYMPQLETQKTVTPKIHNEVSTFLRNLW
GPLAGWAQAVVFCAKLNNNDLALSKKKRGSGNKAVNGKMVKKLKSEVRSKE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagcttggaaaaatgagtagagtaataaacacgataccgggatcaacgatg
cacaacatatccttctccgaaagtgagttaggacttggtctaacacttaccggcggtcag
agttttaggtgggtcgaggttgacggtgctcaaactttccgcggtatatttgctggacga
gtttggaccttgaagcagaacaaaactcatctccagtatcgtgtacacggccccttggaa
agtgacccaaaaaacagacaaatcctatcaagatatttgcgcaaagagatatctttgaag
cacaacgtaagaaaatggtcagcggttgatccgcacttcaaaaaggcctgggaaacagtg
aaaggtgtgcggatactgaatcaagatattgtggagaatttatttgccttcatttgcagc
tcaaataataacatcataagaatatccggcatggttgacaaactctgcagattctttggc
aagaaattatgctgcattgatgacaagcagtattatgactttccgacgatagaatcgttg
gcagagaaaaacgtggaaatgatcctaaaggaagctgggtttggctatcgtgctggctat
atagccaataccgctaagaggctaatagaattgggtggcgaaacgtggttgaaacagttg
cataaagacactgatcaatcttaccctattgcgagggaaaagttgattacacttccagga
attggtcctaaagtggctgattgtatatgcctcatgtcactaggttatctggaagcaatt
ccagtagacacgcatatttttcaagtagctcgagcacgctatatgccgcagttagaaact
caaaagactgttactccaaaaatacacaacgaagtcagcacattcttgcgcaatctttgg
ggcccgcttgccggttgggcccaggctgttgtattctgcgcaaaattaaataataacgat
ttagctctaagtaaaaagaaacgtggttcaggcaacaaggctgtaaatgggaagatggtt
aaaaaattgaagagtgaagttaggtcaaaagaatag
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