Neodiprion fabricii: 124184224
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Entry
124184224 CDS
T08986
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
nfb
Neodiprion fabricii
Pathway
nfb03022
Basal transcription factors
nfb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124184224
09124 Replication and repair
03420 Nucleotide excision repair
124184224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124184224
03400 DNA repair and recombination proteins [BR:
nfb03400
]
124184224
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124184224
DNA repair and recombination proteins [BR:
nfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124184224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
124184224
NCBI-ProteinID:
XP_046429639
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All DBs
Position
6:9473600..9480043
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AA seq
561 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAWMLDNRDTVSVSHKYADIKLQKISPEGK
AKIQLQVVLHDGSSSTFHFVNRNGQEAQIKDRDDVKELLQQLLPKFKRKVNKELEEKNRM
LQENPTLLQLYRDLVITQVISSEEFWAQHAAEYTQAKKGQRQDIGVNGAFLADIKPQTDG
CNGLKYNLTVDIIECIFKTYPAVKKKHVENVPQKMSESDFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDIQSGISDPLVDISSFEDKSIDENYGTGSGKADKASGNIVHQSM
IKRFNQHSIMVLKASTANTSQDTSQLHLNGTTTLSTTKSEATNQIEDRAKAKKRRIQEKL
VYDDLDASCDLNAKTTAPLNLSHIDRYLHGPVPGSGSAEATNEELQVTLTQLRREASNWV
NGNHVPRHATTSLVSPAAAVSALGELTPGGALMKGFREDSLGQLIPKDLEKELRNMYMCT
CELLRHFWKSFPPNTPQLEEKAVRMHEALHRFHSARLKPFEDRVQREFSAVSQHLTSHLN
QLLNTAYRKFGVWQQRKLQMR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgactacttcttccgaagatgttttgatgcaagtgggccaagttcgttataaaaagggc
gatggcactttgtatgtaatgaatgagaggatagcatggatgttggataacagggacact
gtttccgttagtcacaaatatgctgatattaaactacaaaaaatatcgccggagggtaaa
gcaaaaattcaactacaagttgtactccacgatggatcctcgtctacatttcactttgta
aatagaaatgggcaggaggcgcagatcaaggatcgggatgatgtcaaagaattgttacaa
caacttttacccaagtttaaaagaaaggtcaacaaggaattagaagaaaaaaatagaatg
ttgcaagaaaatccaaccttgctacagctctatcgtgatctcgtaatcacacaagttatt
tcctctgaggaattctgggctcaacacgcagctgagtacactcaagcaaagaaaggtcag
cgacaggatattggagtcaatggtgcttttttggctgacatcaagccgcaaacagacgga
tgtaatggtttgaaatacaatttaacggtagacataatcgaatgtatatttaaaacatat
cctgcggtgaaaaaaaagcatgtagaaaatgtcccgcaaaaaatgtcggagtctgatttt
tggacaaagttctttcaatcgcattatttccatcgagatcgtataaacgcagggaccaaa
gatcttttcaccgaatgtgccaaaatagatgatcaagagttgaaaaaagatattcaatcg
gggatcagtgacccattggttgatatttcttcatttgaagacaaatctattgatgaaaat
tatggcactgggtcaggaaaagctgataaagcctctggcaacattgtacaccaaagcatg
attaagaggtttaatcagcatagtataatggtgctgaaagcaagcaccgcgaatacttcg
caagatacgagtcaacttcatttaaatggaacaacaactttgtcaacaactaaatcggaa
gctaccaaccagatcgaagatcgtgccaaagccaaaaaacgtaggatacaagagaaatta
gtatacgatgatcttgatgccagctgtgatctaaacgcaaagaccacagctcccctcaac
ctgtctcacattgacagatatttacatggaccagtaccgggtagcggaagtgcagaagcc
accaacgaagagcttcaagtcaccttaacgcaactcagaagagaagcgagcaattgggtg
aatgggaaccatgtaccgagacatgcaacaacctctttagttagtccagcagctgcagta
tctgctttgggagaacttacgcctggtggtgctcttatgaaaggttttcgagaggatagt
ttaggacaattaattccgaaagatttggaaaaagaattacgtaatatgtacatgtgtacg
tgcgaattattaaggcatttttggaagagttttccaccgaacactccccagctcgaggag
aaggctgttcgtatgcatgaggctcttcacagatttcattctgcgaggctgaagccattt
gaggatcgtgttcaaagggagttttcggcagtcagtcaacacttgactagtcacctgaac
cagctcttgaacactgcctatagaaaattcggagtttggcaacaaagaaaattacaaatg
aggtag
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