Neodiprion fabricii: 124184469
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Entry
124184469 CDS
T08986
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
nfb
Neodiprion fabricii
Pathway
nfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124184469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124184469
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124184469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124184469
NCBI-ProteinID:
XP_046430136
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Position
6:complement(2716461..2718341)
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AA seq
271 aa
AA seq
DB search
MASQYKTIHPVKYLRDYLAQDIRPDGREFLRFRSASVNVGAISQADSSAIFKIGSTTVVC
GIKAELAAPKADTPNCGYLIPNVELSPLCSPKFRPGPPSDQAQVASKTIDDILINSSALD
LTDLCVCIDKLVWVLYCDLICIDYDGSVTDACLGALVAALKSLTLPEVQHNPETGAIVVD
TSDRKPFPLKSLPVSTTFAIFDEQLLLADPTDEEESLAKGKLCLVIDGPELCGLYKPGGI
PISQELLSKSLEKSKKRADLIRKVIEAAVTN
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcaatataagactattcacccggtgaaatatctgcgagattaccttgcacaa
gacataagacccgatggtcgtgaatttcttcgattcaggtctgcaagtgtcaacgtagga
gctattagtcaggccgatagttcagccatattcaagatcggcagtacaactgttgtttgc
gggatcaaagctgaattagcagctccaaaagccgatactccaaattgtggatatttaata
cccaacgtcgaactctcaccactgtgttctccaaaatttcgtcctggaccacccagcgac
caggctcaggttgcttctaagacaatagatgacatcttaataaattcttctgccctggac
ttgacagatctatgcgtttgcattgataaactagtgtgggtgctttactgcgatttgatt
tgcattgattatgatggatcagttacagatgcatgccttggcgcacttgtagctgcactt
aaaagtttaactttaccagaagtccaacataatcctgaaacaggtgccatcgttgtagac
acttctgacagaaaaccatttcctctcaagtcacttcctgtatctaccacgtttgcaatt
tttgatgaacaacttctacttgctgatccaaccgatgaagaggaatctctggccaaaggg
aaactatgtctcgtaattgacggaccagaattatgtggcctttacaagcctggaggaatt
ccaatatctcaagaactattgtcaaaaagtttggaaaagtctaagaagagagcagatctt
atcagaaaagttatcgaggctgcagtgacaaactga
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