Neodiprion fabricii: 124184850
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Entry
124184850 CDS
T08986
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nfb
Neodiprion fabricii
Pathway
nfb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124184850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124184850
03036 Chromosome and associated proteins [BR:
nfb03036
]
124184850
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124184850
Chromosome and associated proteins [BR:
nfb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124184850
PBAF complex
124184850
GBAF(ncBAF) complex
124184850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
124184850
NCBI-ProteinID:
XP_046430936
LinkDB
All DBs
Position
6:27054811..27060042
Genome browser
AA seq
1048 aa
AA seq
DB search
MLSLGPKKDGGPNAKFFESPDILGQLDGVKQWLLKNCKKYVQTDPPTNKSLASLVVQLLQ
FQEDNLGKNVSKPPMTRLPMKCFLDFKPGGGLCQILATAFRFKQEQGWRRFDFQVGKSGS
RMDRAIEMLVAAERALVQNRCMTVPCVYVRPDVDKNTASKVKEVVKRHQGTIAEAEADAT
HIVYPPADPLEEEYARPYLRRERSVLLHWYYFPDSYDSWTTLDLPWDFPEGPLGIGSTSG
SDEIIDYRPQYRVSATWALDLDQYNEWMNEEDYDVDDNGQKRVHKYRLSVEDLMAQPSHP
PPSSAKKQKRKRSPSPPPKIGKRKSGRGPAGLQGSSTSLATPKKSRGGVDEEEDLTQGME
DPPAEPRIIEVVASPANPPSIGPGGGSTAGSGSLSTTGNKKQDSELQPLKSGNMADLDEP
IDGDKGSTQAAQEREERGASKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTI
EKRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVH
AFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSSAAKSL
LDLEKKPAVVGMGPEEKSGLGVMTNFGLKVDQYSRKPAVLKSKQAAGATRDWTEQETLLL
LEGLELHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSK
AGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANTDGK
FDPSAGLAQSGIAGTGPPEPPDDPAVSATSATSSSASVTSPQASTAESKKEELQDVKVKE
GVDATQVPPQSMKKEESVESERDQPEKIEVDPKENDDEAKSKGDPEETEAKDKRDKVVRD
AQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMER
EREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLAQEQQQQQQSQHPPWQASNTQ
QQQQQQQQPPSPQPQVAQPPPHTPPQQA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctctctttggggccaaagaaggacggcggtccaaatgcgaaattcttcgagtcccca
gatatactgggccaattggacggagtcaaacagtggcttctaaaaaattgtaaaaagtat
gttcaaaccgatccacccacgaataaaagtctcgcatctttggtcgtccaattgttacaa
ttccaggaagataacctcggaaaaaatgtgtcaaaaccgccgatgacaagacttcctatg
aagtgtttcctagatttcaagcctggcggtggtctttgtcaaatattagctaccgcgttc
agatttaaacaggaacaaggatggcgacgtttcgactttcaagtcggcaagtccggatct
cgcatggatcgtgcgatagagatgttagtggcagcggaacgggcactggtacaaaatcga
tgcatgacagtaccctgtgtgtacgttagaccagatgtagacaaaaatacagcatccaaa
gtcaaggaagttgttaagcgtcatcagggaacaattgccgaagctgaggctgacgcaacg
cacattgtttatccaccagctgatccccttgaggaggaatacgctcgtccttacttgagg
cgtgaacgctctgttctattgcactggtactactttcccgacagttacgattcatggaca
acattagatctgccttgggattttcctgaaggtcctctcgggataggaagtacaagtgga
agtgatgaaattattgattacagacctcagtatcgtgtgtcggctacttgggctctagat
cttgaccagtacaatgagtggatgaacgaagaagactacgatgtcgatgataatggacag
aagagagttcacaagtaccggctttctgtcgaagacttgatggctcaaccgtctcatccg
ccaccttcgtctgcaaaaaaacagaaacgaaaacgctcccccagtccacctccaaaaatt
ggaaagcgtaaaagtggtcgcggaccggcagggctccaaggttcgtctacttctttggct
actccaaaaaagtctcgaggtggcgtcgacgaagaagaagatctgacacagggaatggaa
gatcctccagctgaaccaaggataatagaagtggtagcaagcccagccaatccaccttct
attgggcctggtggtggatctacagctggtagtggaagtttgtcgacaactggaaacaaa
aaacaagatagtgaactacaacctctaaaatctggcaacatggctgatttggatgagcct
atagacggtgacaaaggaagtacacaagcggctcaggaaagagaggaacgtggagctagc
aaggaacgaggagagggtgggaaaggagatgagccggaagataatgttactgagcaaacg
caccatattgttgtacccagctactcagcttggtttgattacaactcaatccatacgatt
gagaagcgtgcattgtccgaattttttaatggtaaaaacaaatcgaaaacgcccgaaatc
taccttgcttatcgcaactttatgatcgatacttaccgactaaatccaacggaatatatc
acctctactgcctgcagacgtaatttagcaggagatgtgtgtgccattatgcgtgttcac
gcgtttctagagcagtggggtctcattaattatcaagttgacgcagaatctagaccaacc
ccaatgggtccgccacctacatctcacttccacgttctctcagacactccatctggactg
gcacctgttaatccgaatcctcccaaaactccgcagccttccagtgctgcaaaatctctg
ttggatttggaaaagaagcctgctgttgttggcatgggaccagaagaaaagagcggactt
ggagttatgactaactttggtctgaaggtggatcagtattccagaaaacctgcagtttta
aaaagcaaacaagctgctggtgccactcgcgattggaccgaacaagaaacgctattgtta
ttagaagggttagagctccataaagatgattggaacaaagtttgcgaacatgttggatcc
cgtactcaagacgagtgcatacttcatttcttacgtctacctatcgaagatccatacctc
gaagaaggaggccctgagggtctaggaccactcgcctatcagcctgttccattttccaag
gctggtaacccggtcatgagcacggtagctttcttagcttccgttgtggatccaagagtg
gctgctagtgctgctaaagccgctatggaagaatttgcagcaatcaaagatcaagtgcct
gcagccctactggatcagcatcttcgtaatgttcaagcaagtgctaatacagatggtaaa
tttgatccatcagcaggacttgcacagtccggtattgcaggaactggacctccggaacca
cccgatgatcctgctgtctcagctactagtgcaacttcctcgtctgcaagtgttacttct
cctcaagcttcgactgcggaaagtaaaaaagaggagcttcaggatgttaaagtcaaggag
ggggtggatgctacgcaggtgccaccgcaatctatgaaaaaggaagagtcagtggagagt
gaacgtgaccagccagaaaaaatagaggtcgatccaaaggagaatgacgatgaagctaag
tctaaaggagatcctgaagaaactgaagctaaagacaagagagataaggtggttagagat
gcgcaactacaatctgctgcggcggccgcgttagcagctgcagctgtcaaagcaaaacac
ttagcagcggtagaggaaagaaaaatcaaatcattagtggcactactggttgaaacgcag
atgaaaaagcttgaaataaaattgcggcatttcgaggagctcgagacaacaatggaacgg
gaacgggagggcttggaatatcagcgccagcaactaattacagaacggcagcaatttcac
ttggaacaattaaaagcagcggaatttcgtgctcgacagcaagcacaccaacggctagct
caggaacagcagcaacaacagcagagtcagcatccaccgtggcaagcatccaatactcag
caacaacagcaacagcaacaacagccacctagtccgcagccacaggtggcgcaaccgcct
ccgcacactccacctcaacaagcgtaa
DBGET
integrated database retrieval system
