Neodiprion fabricii: 124185255
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Entry
124185255 CDS
T08986
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfb03009
]
124185255
Enzymes [BR:
nfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124185255
Ribosome biogenesis [BR:
nfb03009
]
Eukaryotic type
Pre-60S particles
Helicases
124185255
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
124185255
NCBI-ProteinID:
XP_046431785
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Position
6:complement(29811639..29814083)
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AA seq
581 aa
AA seq
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MSADKKIATDEEEEDEEEKPKNFHEMELDDRILKAVAKLGWLEPTLIQEKTIPLLLDGKD
VLVRARTGSGKTAAFVIPIIQKILSGKQTQMRQEIKALILAPSKELCKQIHQVVSDLTNK
CSREVKSVDISSPLELNAQKPLLAEKPDIVIATPGRLLQHLKANNVSVKKTLETLVIDEA
DLVFSFGYEDDVKSVLAYLPTVYQAVLASATLSEDVLSLKALVLHNPAILKLEEPPLAPP
SQLAHYTLAAEENDKAAILYALLKLHLVRGKTIIFVNTVDRCYKLKLFLEQFGIPTCVLN
SELPASARCRAVTYFNSGTYDIIIASDEKALEEVNLISHLGCCTDFGIPNYCTIFTMFQP
LMVKDKKSKRRKDNESGVARGIDFQFVSNVINFDFPLDVTSYIHRAGRTARGKNQGTALS
FVAMRERSLLDEVDTQLKEGYNRENIFKTYQFKLDEVEGFRYRAKDAWKAVTRIAVREAR
LKEIKQEVLNCEKLKGYFEENPKDLKSLRQDKALHTVRQQPHLKDVPEYIVPQTLKRIAG
IGKRKRKFDREAAATGSSASKSKHLARASNPLISLSIPRKK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggataaaaaaattgcaacagacgaggaggaggaggatgaagaggaaaagcct
aaaaacttccacgagatggaattggacgatcgaatactcaaggcagtggcaaaacttggc
tggctggaaccaactttgattcaggaaaaaacaataccgcttttattggacggaaaggat
gtattggtgcgagctagaactggctctggtaaaactgcggcctttgtaataccaataata
caaaagatcttgtctggtaaacagacacagatgaggcaggaaattaaagcgttgatacta
gcgcctagtaaagaactttgcaaacaaattcatcaagtggtgtccgatttgacgaacaag
tgctcaagggaagtaaagtctgttgacatcagctcaccactcgaacttaatgcacagaaa
cccttactcgcagaaaaaccagatattgtcatcgccacgcctggcagacttctacaacat
cttaaggctaataatgtcagtgtcaaaaaaactttggagactcttgtcattgatgaggct
gatttggtattttcatttggatatgaagacgatgttaaatctgtactagcttacttgcct
accgtctaccaagctgttctagcttcggccacactctccgaagatgtactgtcgttgaaa
gcattagttctacataatccagcaatattgaaattagaggagccacccttagcaccaccc
tcacaattggcacattatactctggctgctgaagagaatgataaagcagctatattgtat
gctttgcttaaactgcatttagtcaggggaaaaacaatcatatttgtaaatacagtggat
cggtgttacaagctgaagttatttttggagcaatttggaatcccaacgtgcgttctgaac
tctgagttgcctgctagtgcaagatgcagggcagtaacgtatttcaatagtgggacttat
gatattatcatagcatcggatgagaaggccttagaagaggtgaatttaatttctcatctt
ggctgctgtacagattttggcattcctaattactgtacaatttttacaatgtttcagcca
cttatggtcaaagataaaaaatctaaacgcagaaaagacaatgagtccggtgtggcacga
gggatcgattttcagtttgtgtccaatgtgataaattttgattttccattggatgtgact
tcttatattcatagagcaggacgaacagcaagaggtaaaaatcaaggcacagcgcttagc
tttgtagctatgcgagaaagatctttgctcgatgaagttgacactcagttgaaggaaggt
tataacagggaaaatatattcaaaacttatcagttcaaattagacgaagtcgaaggtttc
aggtatcgagcaaaggatgcctggaaagcggtgaccagaatagcagtgcgcgaagctcgt
ctaaaagaaataaagcaggaagtactgaactgtgaaaagttgaaggggtattttgaagaa
aatccaaaagacctaaaatccctacggcaagacaaggcactgcacacagtgaggcagcag
ccccatttgaaagatgttccagagtacatagtgccccagacgctgaagaggatagcagga
atagggaaaagaaaacgaaaatttgacagggaagctgcagcaactgggtcgagtgctagc
aaatcaaaacacttagccagagcttcgaatccattaatcagtctcagcataccccgaaaa
aagtaa
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