Neodiprion fabricii: 124185457
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Entry
124185457 CDS
T08986
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
nfb
Neodiprion fabricii
Pathway
nfb04140
Autophagy - animal
nfb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124185457
04148 Efferocytosis
124185457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfb04131
]
124185457
Membrane trafficking [BR:
nfb04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
124185457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
B129_C2H2-zf
Zn-C2H2_12
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
124185457
NCBI-ProteinID:
XP_046432219
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Position
6:complement(26135059..26139281)
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AA seq
887 aa
AA seq
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MHDAYEASPLLKLTVQIESITAYDDNLLIGTRQGHLLMYSVPPKSNDKQELQLLRYGKNF
SKKPILQIEVVPEYNLLILLTDNIICVHDLNSATIPQICQLQKTKGATLFVLDVQRTQSL
TGEKDITVRLCVAVKRKLQLYEWKVDQFIDFGEELTVPDVPRVLSWCGETVVLGFRGLSY
ILLDLDGTSKELFPSGKSPEPGITKLSDTSFALGKDSQSILMNTKGELVQHNSVKWPDSP
SATAWDDPFLMGIITDTLEVYTLEGCLHIQTIPELNKARLLCRCRKGLVYVASVSQVWCI
NAVEVTHQIRTLLEQNQFQLALKLTHLSDITEEEKAKKTWKIQTLYAHYLFANKKFAESM
EQFFKSGTDPYEVIRLFPDLVSQPTNANETSEHVTTVPILQDRDLEQGLLALIKFLTEVR
HKLMGDTQAKDKENEKNSEKDTMKGEKTKNITAVATEQLLKIIDTTLLKCYLQTNDALVA
PLLRLNHCHLAESEKTLLKYQKYPELIILYQTKGQHKKALELLEKQSNESDSSLRGTERT
IQYLQHLGKDHMDLILKFSGWVLEQDPEQGLRIFMEDVQEVEHLPRPKVLDYLLRCHKDL
VITYLEHVVHFWMDNNPLFHNVLVHQYKEKCLAGLNPNASPAEKQNVQHLRQKLQQFLEK
STHYTPETVLVHLPFDCLFEERAIILGRLGRHEQAISIYVNLLNDVPKAIQFCSNVYAKF
EGQKNSEKGKNQDGADEVYVTLIKQLLKPDNEGVLVATGCTPENRRTAQPDLETALELLE
EHAAKIEPLKALEVLPGNVPIGRIRHFLEASLQNNLNERRRTQILKGLLYAEHLQVQEQR
MHYESQSVLLTEFNICPVCKKRFGNQSAFARYANGDIVHYSCQEKKA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcctacgaagcttcacctctcttgaaattgacagttcagatcgaatcaatt
actgcttacgatgataacttactcatcggcactagacagggacatttgttaatgtacagt
gttcctccaaagtcaaacgacaaacaagaattacaattgcttcgatacggtaaaaacttt
agcaaaaaacctattttgcagatcgaagttgtaccagagtacaacttgttgatacttttg
accgacaacatcatttgcgtacatgacttaaattctgcaacaatccctcaaatatgtcag
ttgcaaaaaacgaaaggtgcgacgctcttcgtgttggatgtacaacgtactcagagtttg
acaggtgaaaaagatataactgttcgcttgtgtgttgctgtgaagcgaaaattacaattg
tacgagtggaaggtggatcaatttatagactttggagaagaattaactgttcctgatgtg
cctcgagtcttgtcgtggtgcggagaaactgtggttttgggattccgtggattgtcttat
atacttttggatctagatggtacaagcaaggaattatttccaagtggaaagtctcctgaa
ccaggaataacaaaactgtcagacacgtcttttgctttaggaaaagattcacagtcaatt
cttatgaacacaaaaggagaattggtccaacacaactctgtcaaatggccagattcgcct
agtgctacagcctgggatgatccatttctcatgggtataattaccgatactttggaagtt
tataccttggaaggttgtttacacattcaaacgataccagaacttaacaaagctagatta
ttgtgcaggtgtagaaagggccttgtttatgtagcatcagttagccaagtttggtgtata
aatgccgtggaggtgacgcatcagattcgaacacttcttgaacagaatcagtttcagctg
gctttaaaattaactcatttgtctgacataacagaagaagaaaaagcaaaaaaaacgtgg
aagatacaaacgttatacgcccactatctttttgctaataaaaaatttgccgagtctatg
gagcagtttttcaaatcaggtactgatccgtacgaagtaatcagacttttccctgatctg
gtttcccagccaaccaatgccaatgaaactagcgaacatgttacaactgtgccaatattg
caagaccgtgatttggaacaaggcttgcttgccttgattaagttcttgacagaagtgaga
cataaattaatgggtgatacgcaagcaaaagataaagaaaatgagaaaaatagtgagaaa
gatacaatgaaaggagagaaaaccaagaatataacagctgtggctacagagcagctttta
aaaataatcgacacaacattactcaaatgttacttacaaacaaatgatgccttggtagcg
ccactgttgcgtttaaaccattgccatttagcagaatcggagaagactttattgaaatat
cagaaatacccagaattaattatattatatcaaacaaaaggtcagcacaagaaggcttta
gagctgcttgagaaacaatccaacgaaagtgattcgagtctaagaggtaccgagagaaca
attcaatacttacagcacctaggtaaggaccatatggatttgattttgaagttttctgga
tgggttttggaacaggacccagaacagggcctcagaatatttatggaagatgtgcaggaa
gttgaacatttgccacgtcccaaagtattggattatcttttacgttgtcacaaagacttg
gtgataacgtacttggagcatgtggttcatttttggatggataacaatcctctatttcac
aacgtcctggtacaccaatataaagagaagtgtttagcaggcttgaacccaaatgcttcg
ccggctgaaaagcaaaatgttcaacaccttcgacagaaactacaacaattcttagagaag
tcaactcattacacgccagaaacggtcctagttcatttaccatttgattgcctattcgaa
gaacgtgcgattattttaggacgattgggtcgtcacgagcaggccatctccatctatgta
aacttattaaacgacgtccccaaggcgattcaattctgcagtaatgtatatgcaaaattc
gaaggtcagaaaaattcagaaaaggggaaaaatcaagatggggccgacgaagtctatgtt
actttgatcaagcaacttttgaagccggacaacgaaggtgtcttggtagctactgggtgc
actccagagaaccgaaggacagctcaacctgacttggaaacagctttggaattgcttgag
gaacatgctgcaaaaatcgaacccttgaaagccttggaggttttgcctggcaatgtacca
ataggtcggataagacatttccttgaggctagcttgcagaataatctaaatgaacgacga
aggacccaaattctgaaaggcttgctttatgctgaacacctccaggtacaggagcaaaga
atgcattacgagtcccagagcgttctcttaacggagttcaatatttgtccggtatgcaaa
aaacgttttggaaatcaaagtgcatttgcaagatatgccaatggtgatattgttcactat
tcatgtcaagagaaaaaggcgtaa
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