Neodiprion fabricii: 124185645
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Entry
124185645 CDS
T08986
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
nfb
Neodiprion fabricii
Pathway
nfb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124185645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfb04131
]
124185645
Membrane trafficking [BR:
nfb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124185645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
ANAPC4_WD40
zf_RING_Vps8
TPR_Vps41
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
zf_RING_Vps8_fungal
PQQ_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_LRRK2
TPR_VPS8_2
Smg8_Smg9
zf-RING_11
WD40
zf-RING_5
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124185645
NCBI-ProteinID:
XP_046432559
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All DBs
Position
1:19736132..19892083
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AA seq
1300 aa
AA seq
DB search
MAENVLGSEIGFQDYHATEAIHLDIEELDDAEYAIPAVEEPPSLESILTELDSGSLSGTE
DEFVTPAEKLGGSETASVGSLLSLNSVSKPFRPSQSQSSSAILRHVILKGISSQISSASE
RINAGLASAMAAGGNMLVIGTSHGLILGFDSNQTLRWCDQEARHQGSVSALCFNHDGSRL
LAGFARGHILMLESSSGKVLRTLTDVHPPGTAVLHVKFTDSPKLALCSDSGGSVFELNFT
RVMGVRGCDSKCLFSGSRGEVCTLEPLLLNQLPTHSLKNYTLVAMATLSKVIVVSIRPRM
RVVLTHALGGTAIAPPQVSWQLVVIQAADSTRVVDPVLALARDDAVHFYQVCTERNSRIR
LSPLQRVTVSYMISNLRWLNARSLALLDTQEKLHLLDVRLQDELETLDLSRVGISYASSH
FKGLSTGGNVSKAMALAGERACYNTVIAFGSQLLLLGTKSLHAVCIRTWTERLRHLTLQR
RFPEALALGLSFYQDKGQAVVGLCGSKQRRKQIARDKVCDVLIQYMDDLNHCSVENCAEV
VESCVNFCIQLENTDLLFGKLWELVCETDEFRGSYLRALEGPLLNGSLAPRLPPLISQQL
VSLYEQEERLDSLQAIIVLLDVDCLDIHQVTKVCGQQGLWEALIYLQTSALSDFTAPIHQ
LMPVLQMALANARTQKLSPDKIRLGNAILVYASCCLAGRGFPRGNLPEGVTQRAKADVLR
ALLSQHSSSASDAERQYPYIRTLLEFDAKGFLDVITIAFQEPEFMSEMGLRQRQRLIDIL
LNIVLPTTPLSPDNYDYLTDEQRAAVLNFISNEVAESSVTLEAGALNRMVEMLSTGTNNS
EDMSRDIEVEKENAILQLLHSKKLTNISDNCLLNLAHNANFLRVAETIYCGQEDWISVCR
CMLTDKSRRYEVWEWLDCLPLDSLQAVVTAHAAELVTVDAARTAVLISNRMPNSLDNILQ
KMNEDPKLEYALLGALYQLIQYGEEDIKMELTTEILEKYLKLMCNLEPERVVQHLCGPHG
CRLNEVLKIVQDINHTEAIALMLEKLGNYQEAFDLLLADLQSLFEMHCGGDIKSNKAIQA
TSELAALCRRAAGHLDWMPLVETVLHPYTENNIQKGESLQGKLLRIVLESLSGTTTLSTV
LEQILKHPLATGGTIGDIRELLTGVLTHSCYDQTLVEASARLVSMELHEALKKSLRDAGK
AFQNVCLYCPVCRRGLSQCTDYAVVFRCGHGYHISCIGDSKVCYQCLRTKGWAPTVTNSL
PTTKRPPEKRKNQPPSLTTDRDLRLRLAPQILLPDFEGIF
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaatgtactggggtccgagatcggctttcaggattatcacgctaccgaagca
attcatttagatattgaagagctagatgatgctgaatatgccatcccggcggtggaggag
ccaccctccttagagagtattttgacggaactagattctggttcactatctggaacagaa
gatgagtttgtaacaccagcagaaaaactgggaggtagcgagacagccagcgtagggagc
ttattatctctaaattctgtcagtaaaccatttagaccatctcaatcacaatcgtcgagt
gctatattgaggcacgttatactgaagggaatatcttcacaaatttcatcagccagcgaa
aggataaatgctggtttagcaagcgccatggctgctggtggtaacatgttagtcataggc
accagtcacggtttgattctgggctttgattctaatcaaaccttacgttggtgcgaccaa
gaagctaggcaccaaggctccgtttcagctttatgcttcaatcacgatggttcgagacta
ttagcaggctttgcaagaggacacatactaatgctagaaagctctagtggtaaagtttta
aggacactcactgacgtacatcctcctgggactgcagtgttacatgtgaaattcacagac
tcaccaaaactggctttgtgcagtgacagtgggggttctgtatttgaattaaattttact
cgcgttatgggagttagaggctgcgacagcaaatgtctctttagcggttcaaggggcgaa
gtttgtacattggaaccccttctattgaaccaactcccgacacattcgctgaagaattat
acgctggtcgcaatggctactttatcaaaggtaatagttgtttctataagaccacggatg
cgggtggttctcacgcatgccttaggcgggacagccattgctccgccacaagtatcgtgg
cagctagttgtcatacaagccgcagattcgacccgtgtcgttgatcctgtgttggcctta
gctcgagatgatgccgtacacttctatcaggtttgcacggaacgaaattctaggatacgt
ctttcaccattgcaacgtgttactgtttcctatatgatcagcaatttaagatggctaaac
gcaaggtccctggcactgcttgatacacaggaaaaattgcatttgcttgatgtcagattg
caagacgaattggaaactctggacttgagtagagtgggaatttcctatgcatccagtcat
ttcaaaggattgtctactggtggcaatgtctcaaaggcaatggcgttggcgggtgaaaga
gcttgttataatacagtaatcgcttttggcagtcaactgctactactcggaaccaaaagc
cttcacgcagtttgcataagaacctggactgaacgtttacgccacttaacactgcaacgg
cgtttcccagaagcccttgccttggggctttctttttatcaggacaaaggacaagctgtc
gtaggtttgtgtggttccaagcaacgccgtaagcagattgcccgtgacaaggtctgtgat
gttttaattcagtacatggatgacttaaatcactgctccgtcgagaactgcgcagaagtg
gtggagagctgcgtgaatttttgcatacaattagaaaataccgacttattatttggcaaa
ctgtgggaacttgtatgcgaaacagacgaatttagaggaagctatttacgagcacttgag
ggcccactgttgaatggaagtctggctccacgattaccgccacttatctctcaacagtta
gtgagcttgtatgaacaagaagaacgattggattcattacaggccatcatcgtcttgctt
gacgttgattgtttggacatacatcaagtaacaaaagtatgtggtcaacaagggctctgg
gaagctctgatttatttgcagacatccgctctaagtgattttacagcaccaattcaccag
ctcatgccagttctccaaatggcacttgccaatgccagaacacagaagttatcaccggat
aaaataagattaggcaatgccattttagtatatgccagttgctgccttgcaggccgtgga
tttcctagaggcaatctaccagaaggtgtaactcagagagccaaagctgatgtcttgcgc
gctcttttgtcgcagcattcaagttcagcgagtgacgctgaaaggcagtacccgtatatc
agaaccttacttgaatttgatgccaaaggttttctagatgtgataacaattgcatttcaa
gaaccagaattcatgtctgaaatgggtttgcggcagcgtcagagattgattgacatttta
ctgaacatagttctgcccaccacacctctaagtcctgataattatgattacttgactgat
gaacaaagagcagcagttttaaattttatatccaatgaagtggctgaaagctcggtaaca
ttagaagccggtgcgttgaacaggatggtagaaatgttatcgactggtacaaacaacagt
gaagacatgtcaagagacattgaagttgaaaaagaaaatgcaatcctgcaacttttacac
tcaaagaagttgacaaatatatctgataactgcctactcaatcttgcacataatgctaac
tttttgcgagttgctgaaaccatttactgcgggcaagaagactggatatcagtttgccga
tgtatgctgacagacaagtcacgtcgttatgaagtatgggaatggctggactgtttgcca
ttagactcactgcaagcagttgttaccgcacatgctgctgagttggtgacagttgatgcg
gctcgaacagcagtgctcataagtaatcgaatgccaaacagtttagataacattcttcaa
aaaatgaatgaagatccgaagttagagtacgctttgctcggagccttgtatcaattaatt
cagtatggagaagaggatataaaaatggaattaaccacagaaatacttgaaaagtacttg
aaattaatgtgtaatttagaaccggagcgtgttgttcaacatctctgtggaccacacggt
tgtcggttgaacgaagttctgaaaatagtccaggatataaaccatacagaagctatagct
cttatgttagaaaaattaggcaattatcaagaagcattcgatttactactagcggatctt
caaagtctgtttgaaatgcactgcggtggggatatcaagagtaacaaggctattcaagca
acttcagaattagcagcactatgcagacgagctgctggccatctggactggatgccgctg
gtagaaacagtgttacatccatataccgaaaacaatatccaaaaaggtgaatcgctacaa
ggcaagttgcttcgaatcgtgctagagtcattgagcggcaccacaaccctatccacagta
ttagaacaaattttaaaacatcctctagctactggtgggacaattggtgatataagagaa
ttattaactggcgttttgacgcactcttgttacgatcaaacactagtcgaagcaagtgca
agattagtaagcatggaactgcatgaagctcttaaaaaatctctcagggatgcaggcaaa
gcgtttcaaaatgtgtgcttatattgcccagtgtgtcggcgaggactttcacaatgcaca
gattatgcagtagtgtttagatgtgggcatggataccatatatcttgcataggagattct
aaagtatgctaccagtgcttgcggactaagggctgggcaccaacagtgaccaattcactt
ccaacaactaaaagaccaccggaaaaacggaaaaatcagccaccaagccttacgacggac
agagatctcagactacggctagcgccacaaattcttcttccagactttgagggaatattt
taa
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