Neodiprion fabricii: 124185759
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Entry
124185759 CDS
T08986
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124185759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfb04121
]
124185759
Enzymes [BR:
nfb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124185759
Ubiquitin system [BR:
nfb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124185759
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124185759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
zf-C3HC4_2
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
zf-C3HC4
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
zf-RING_UBOX
ANAPC4_WD40
WD40_like
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
zf-RING_2
Beta-prop_DCAF12
WD40_RFWD3
zf-C3HC4_4
Beta-prop_WDR75_1st
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_3
U-box
Beta-prop_IFT140_1st
Beta-prop_SCAP
zf-RING_10
Beta-prop_SPT8
zf-rbx1
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
124185759
NCBI-ProteinID:
XP_046432799
LinkDB
All DBs
Position
6:complement(21840772..21853804)
Genome browser
AA seq
695 aa
AA seq
DB search
MSVGDSGELESSGVGVSSGNEASPLSTTRRAQSVKRLLQSANVLQGISGTLEDKNNDYLC
PICIEVMNEPHITRCGHTFCYPCIINSLEVNGRCPKCSFTLTQQDIFPNFVLNDLIAKYK
MRMKGPGDSGSGTGSTRVGGLSQTEIDMLIPVCDGLRGFVAAESANLTLPDVNVMLEVLM
QRKNLLEAESCATQNKLLHEFLRHLLRHKEDQRNQLAKEVALIKRDIEEVENILKEVQSK
CPRVEDLKKSSETDTAQVSAIKREMIELIDIIDSNMVKDGDLNPPDSCNNDLFASAMIQK
QNCATSILAIRRKRMHAHFDEFVQCYADTRIKDLLFEQSEKVQHQTETEPGTSSGLDVFR
DNLVKFLRYNSLRTLATLNYSSDVFNSSTIVSSIEFDKDNEFFAIAGVTKRIKVFDYGVA
VRDSVDIHYPCAEMICSSKISCVSWNSYHKGMLASADYEGTVTVWDTITGQRTKIFQEHE
KRCWSVDFNDVDTRLIASGSDDARVKLWSLNSDHSVASLEAKANICSVKFNPESSCHLAF
GSADHCVHYYDLRNLKEAICVFKGHRKAVSYVKFINKEEIVSASTDSQLKMWNINSPHCV
RTFVGHVNEKNFIGLATDGEYIACGSENNALYIYYKGLTKQLFSNKFNAARSVLEMQEKK
EEELNEFVSAVCWRKRSNVLVAANSQGIIKILELI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttggtgacagtggcgaacttgaaagcagcggtgtgggtgttagctcaggtaac
gaggcttcgccattatccaccactcgacgtgcgcaaagtgttaaacgtttattgcaatct
gcgaatgtactccaaggtatcagtggtacccttgaagacaaaaataatgattatctatgc
cccatatgtatcgaagtgatgaatgaaccacacatcactcgatgcggtcacacattttgc
tacccatgtattatcaattcgctcgaagtcaatggccgctgcccgaaatgtagtttcaca
ctgacccagcaggatatatttcctaatttcgtattgaacgatttgatcgcaaagtataaa
atgcgaatgaaaggccctggtgattcgggaagcggtacaggaagtaccagagttggaggt
ctttctcaaacagaaatcgatatgctcattccagtatgtgatggactgagaggctttgta
gcagcggaaagtgctaatttaactttaccagatgtaaatgtaatgctggaggtccttatg
cagaggaaaaatttactcgaagccgaatcctgcgcgactcaaaataaattgcttcacgaa
tttctgagacatttgctcaggcacaaagaggaccaaagaaatcagttggcgaaggaagtc
gctttgatcaagcgtgacattgaggaagttgaaaatattttaaaagaagttcagagcaaa
tgccctcgtgttgaggatttgaaaaaatctagcgaaactgatactgcacaagtttcggct
atcaagcgagaaatgatcgagctaattgatatcatagactcaaacatggttaaggatgga
gacctaaatccaccggattcgtgcaataacgatctttttgcttcagccatgatacagaaa
caaaactgtgccacttcaatcttggcaattcgccggaagagaatgcatgcacattttgac
gaatttgttcaatgctacgctgacactcgtatcaaagatctactttttgaacagtccgaa
aaggtccagcaccaaacagaaacggaaccaggaactagttctggattagatgtattcagg
gataatttagttaagtttttaaggtataactctctgcgaacattagctacattgaattat
tcatcggatgtgtttaatagctctactatcgtatcgagtatagagtttgacaaagataac
gaattctttgctattgctggtgtcacaaaacgcatcaaagtgtttgattacggagtagcg
gtacgagatagtgttgacattcattatccgtgcgctgaaatgatatgtagttcaaagata
tcgtgcgtctcgtggaattcctatcataaaggaatgttggcttctgctgattacgaggga
acagtcactgtatgggatactataactggtcaacgtaccaaaatatttcaagaacatgag
aaacgttgctggtccgtcgacttcaacgatgttgacacaaggctgatagcttcaggatcg
gatgatgcgagggtgaaattatggtccctcaacagtgaccactctgtagcttcactcgag
gctaaggcaaatatttgttctgttaaatttaatccagaaagctcttgtcatttagcgttt
ggatcagcggatcattgtgtgcattattatgatttgcgtaacctgaaggaagcgatatgt
gtatttaaaggccaccgcaaagctgtgtcctatgttaaattcataaacaaagaagaaatt
gtttctgcaagtacagattctcagttgaaaatgtggaacatcaatagtcctcactgtgtt
aggacttttgtgggtcacgtaaatgagaagaacttcatcggcctagcaacagacggtgaa
tacattgcgtgtgggtcagaaaataatgcactgtatatttattacaagggattaacgaaa
caactgttctcaaataagtttaatgctgcaagaagtgttttagagatgcaagaaaaaaag
gaggaagaacttaatgaatttgtatcagctgtctgttggagaaaaaggtctaatgtttta
gtagcagctaattctcagggtattattaaaattttggaacttatttga
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