Neodiprion fabricii: 124185823
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Entry
124185823 CDS
T08986
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfb03019
]
124185823
Messenger RNA biogenesis [BR:
nfb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124185823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
SAM_1
PHAT
SAM_2
Vts1
SAM_3
Motif
Other DBs
NCBI-GeneID:
124185823
NCBI-ProteinID:
XP_046432914
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All DBs
Position
6:24824330..24829897
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AA seq
623 aa
AA seq
DB search
MKWSPGALFCEQVGELTRVFSQWNECEQTVVLYALLRRIPAVQARFLAQAVQHSLHSVSE
LNSQELNANSPGFINSLLSETTETAINQLLTHLPLLRPGNSECKQCYLVAIPELVSHCVS
TGQYTEQTQQLLSYTLIHPAITSQDRRSLTQWLRHLEERISGTPPIHSLEEYTTTTPRWD
NIWPRTAKQHQHQQQQQQNESSNIFGTHPTSTFNLQYPSPVARQRRSNSLTPPIAAHHLD
VVDRSNNTTTMNRHKPRSFSVSGEHAGSLLGLGPLSPQSSCASSGSEGRLDEASTRTVAS
GMKDVAAWLKTLRLHKYSYLFTTLSYEEMLELTEERLAEQGVTKGARHKLALSIAKLQQR
HPTLLALERDLLQPNRESNQQASFSHGQGIIANALDELKVIIATPMKPSQENDPSDIPAQ
FTKVMGKLCSRLALESMDEGILLNCVTVLEKVLQHDSFTPNQKEKIQQWRNRLGNPRPTP
KWQHNYGYNRRYCNPSQHNPHNRKPSLNLAHVNNGHAHGNTFALSPHRNSISTPYLQNNQ
NQSLTQTQNSLHPLHVAEKRPSLQETSLEQLQKSLQRTYSAPRDNFLSHSMSPSETTDPE
INSRLESLCLRMTEQAIGGFGEA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtctccaggtgccctattttgcgaacaggttggagagctgacacgcgttttt
tctcaatggaatgaatgcgagcagacagttgttctctacgctttattgcgtcgcatacca
gctgtgcaagcgagatttttggcccaagctgtgcaacattcgctccattctgtttccgag
ctaaattcgcaagagctcaatgcaaacagtcctgggttcatcaattctttgctgtctgaa
acaacagagactgctattaatcaacttttgactcatcttccgttgctgcgtcccggaaat
tcagagtgcaagcagtgttacttagtcgctataccagagctggtaagtcactgtgtcagc
actggacaatacacggagcagactcaacagctcctgagttacaccttgattcatccagca
ataacaagtcaagataggcggtcgctaacccagtggttgaggcaccttgaagaacgtatc
agtggcacaccccctattcacagcctcgaagaatacaccacgacaactcccagatgggat
aacatttggccacgtaccgcaaagcagcaccagcaccaacaacagcaacagcagaacgaa
tcatctaacatatttggtactcatccaacatctacgttcaatctacagtatccatctcct
gtcgctagacaacgtcgctcaaatagtcttacaccaccaattgctgctcatcatctagat
gtggttgatcgttcgaataatacaactaccatgaacaggcacaagccacgcagtttcagc
gtgtctggcgaacatgctggaagtttacttggattaggtcctctcagcccccaaagttct
tgtgctagtagcggcagtgaaggccgtttagacgaagcatctacacgaacagtggccagt
ggtatgaaagatgtagctgcttggttgaaaacgttgagactacacaagtacagttactta
tttaccactttgagttatgaggagatgctggagctcactgaggaacgattggccgagcaa
ggtgtgactaagggtgccagacataagttggcactatccattgccaagctacagcaacgc
cacccaactctgttagcactggaacgagatttacttcaaccaaatcgggagtctaaccaa
caagcttccttctcccacgggcaaggcataattgctaatgcattggatgaattgaaagtt
attatagccacgcccatgaaacccagtcaagaaaatgatccctcagatattccggcacag
ttcaccaaagttatgggtaaactgtgcagtcgtttggctttagaaagcatggatgaaggg
atactgctaaactgtgttactgttctggagaaggtcttgcagcacgactcttttactcct
aatcaaaaagaaaaaattcagcagtggcgcaatagacttggaaatcccagacccactccc
aagtggcagcataactatggctacaacagaagatattgtaacccttcgcagcataatccg
cacaatagaaagccgagtctgaatttggcccatgttaacaatggtcatgcacacggcaac
acgtttgcattgagtccacatagaaacagcatttcaactccgtaccttcagaacaatcaa
aatcagagtcttactcagactcaaaacagtttgcatccgctgcatgttgctgagaaaaga
cctagcttacaggaaaccagtttggagcagctgcaaaaaagtttacaacgcacgtacagc
gctccaagagataattttctgagccactcaatgagtccatcggagacaacagatcctgaa
ataaattcgcgccttgaatctctctgcctgcgaatgactgagcaagccatcggcggtttc
ggtgaggcctag
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