Neodiprion fabricii: 124185931
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Entry
124185931 CDS
T08986
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124185931
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124185931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_8
TPR_14
TPR_12
TPR_CcmH_CycH
TPR_16
TPR_17
TPR_11
TPR_6
TPR_10
TPR_9
TPR_Slam
TPR_7
TPR_MalT
PknG_TPR
ARM_TT21_4th
ANAPC3
TPR_21
Peptidase_S41_N
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
124185931
NCBI-ProteinID:
XP_046433114
LinkDB
All DBs
Position
7:23975030..23980908
Genome browser
AA seq
1238 aa
AA seq
DB search
MASIEIPLRDTDEVIELYLDQLPDGDEVLGILRQEHAQLSIWVNLALEYYKLQKIEDFIK
ILESSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRDLFTKATLLYTTADK
IIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGA
LAFYKKALRTNPNCPAAVRLGMGHCFMKLGNQDKAKMAFERALQLDAQCVGALVGLSVLK
LNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENE
AMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPHFGLGQMYVYRGDAENAAQ
CFEKVLKAQSGNYETMKILGSLYANSSSQSKRDIAKSHLRKVTEQFPDDVEAWIELAQIL
EQSDLTAALNAYATATRILKDKVQADIPPEILNNVGALHYRLGNLEEARNNLEESLARSK
TDAEQDPVYYNSIAVTTTYNLARLNEALCVFDRAEKLYKDILKEHPNYVDCYLRLGCMAR
DKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKSPTTSTDAY
SLIALGNIWLQTLHQSGKDKDREKRHQDRALAMFKQVLRNDPRNIWAANGIGAVLAHKGC
VNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQY
LGRAYFKAGKLREAKMTLLKARRVAPQDTLLLYNIALVLQRLATQILKDEKSTLVIVLQA
VHELGLSHKYFQFLGMQGEKMDQLAEIEARKCQDLLSQAQYHVARARRLDEEEKILRKKQ
EEERQAFRIRQTEEQKKVEDMRRQKSEAMLQKRQEYVEKTKNVLLFGDMPSEKPTKKGRK
VRSEQYLSDSGSDRNERTEDSAPREKKRKRKSSGERKERKSSGKGRRKRHANSGESGGSG
SDRPKTKRGRKAGGSNKGKGFRKSGTADLSSKQKMRIVSKETISTSESESDNERPNMASG
NESGEENAGRGRRRIASESEGSRASRSRSRSRSKSSSRSKSGSRSRSRSGSRSRSGSRSR
STSRKSASRSRNQSRSRSRSNSGSRKSGSRSRSRSRGSSGSRKSHSRSRSRSGSGSRSRS
RSKSGSRSRSRSKSGSRSRSRSRSRSRSRSRSGQSKSKSRSRSRSGSRSRSRSKSGSRSR
SASGSARSASPVSRKSISGSEDGSRHSSPQRGGQSGSE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatcgagatacctcttcgtgatacggacgaggtaatcgaattgtacctggat
caattacccgacggcgatgaggttctcggtattttgcggcaggaacatgcccagctcagc
atctgggtcaacctggcgctcgagtattacaaactacagaagatcgaggattttattaag
attctggagtcgtcgaggatcgacgcaaacattgactacagggattatgaaaaagaccag
atgcgagcactggacatgctggccgcgtactacgtccaggaggcgaatcgcgagaagaac
aaagacaagaagagagatctcttcaccaaggcaacgttgctctacactacggcggacaaa
attatcatgtacgaccagaatcatctcctcggtcgagcctatttctgcctcctcgaaggg
gacaaaatggaacaggcagatgcacagtttaacttcgttctgaaccaatcgcctaacaac
attccgtcgctcttggggaaggcgtgtatagcttttaacaagaaagactatcgcggagct
ttggcattttacaaaaaggcactcaggacgaatcccaattgcccggcggcggtcagactc
ggaatgggacattgttttatgaaactgggtaaccaggacaaagccaaaatggcgtttgag
agagctttgcagttggacgcgcaatgcgtcggagctctggtcggcctgtctgtacttaaa
ttgaatcagcagcagccggacagcatcagaacgggtgttcaaatgttgtccaaggcctat
acgatagactcgacgaatccgatggttctgaaccatttggccaatcatttcttcttcaag
aaagattacaacaaagtgcaacatttggctctgcacgcttttcataataccgaaaacgag
gctatgcgtgctgagagctgctatcaactcgccagagcctttcacgtccagggagattac
gaccaagcctttcaatactattatcaggcgactcaattcgctcccccggttttcgtcctg
cctcattttggccttggtcaaatgtacgtctatcgtggagatgccgagaatgcagcgcaa
tgttttgaaaaagttctgaaagcccagtccggcaattacgaaacaatgaaaattcttggc
tctttgtacgccaactcaagctcccagtcgaaaagggacatagccaaaagtcatctgaga
aaagtaacggagcaatttcctgacgatgtcgaagcgtggatcgaattggctcagattttg
gagcaaagcgatctaacggctgcattgaatgcttatgctacagccaccagaattcttaaa
gacaaagttcaggctgatattccacctgaaatccttaataacgtcggtgctcttcattac
agacttggaaatttggaagaggcaagaaacaacctggaggagtctttggccaggtcgaaa
actgacgctgaacaagatcctgtttattacaattccattgcagtcactacgacgtataat
ttggctcgcctaaacgaagcattgtgcgtatttgaccgggcagaaaaactgtacaaagac
attttaaaagaacatccgaattatgtggactgctacttgcggttaggctgcatggccaga
gataagggtcaaatttacgaagcttcggattggttcaaagatgccttgaggataaataac
gagcatccggacgcctggtcactcttgggaaacttacatttggctaaaatggagtgggga
ccgggacaaaaaaaatttgaacggatcctgaaaagtccaacgaccagcacagatgcctac
tcgcttattgccttgggtaatatttggctgcagactcttcatcaaagtgggaaagacaag
gacagagaaaaacggcaccaggacagagccttggccatgttcaagcaagtattaagaaat
gatccaagaaatatttgggccgcaaacggtataggagctgtacttgctcacaaaggttgc
gtcaacgaggccagagatatatttgcccaagtcagagaagcaacagctgaattttgcgat
gtctggttgaacattgctcacatttacgtggagcaaaaacaattcgtcagtgctattcag
atgtatgaaaactgcttgcgtaaattctacaagtatcatcacgtagaggttcttcaatac
ttgggcagagcttatttcaaagctggaaaactgagggaagctaaaatgactttgttaaag
gctcgcagagtagctccccaagacacattactgttgtacaatattgctctggtcctacaa
agattggcgacgcaaattttgaaggatgaaaaatcgacgttggttattgtattgcaagct
gtacatgaattaggattatcccacaaatattttcaattcctgggtatgcagggtgaaaaa
atggatcaacttgctgaaattgaggcaagaaaatgtcaggatttgctgtcgcaagcgcaa
taccacgttgctcgagcacgaaggctggatgaggaggaaaaaatcctccgaaaaaagcag
gaggaagaaagacaagccttcagaatacgccagacggaagaacagaaaaaagtggaagat
atgcgtcgccagaaatcagaagccatgttacaaaaacgacaagaatatgtggagaaaacg
aaaaatgttttactatttggcgacatgccatcagaaaagcctacaaagaagggtaggaaa
gtaaggtctgaacaatatctaagcgatagtggctcagatagaaatgaacgtaccgaagat
tcagctcccagagaaaaaaaacgcaagagaaagagcagcggtgagagaaaggaacggaaa
tcgtcaggaaagggaagaaggaaaaggcatgctaacagcggagaaagtggaggttcggga
agtgatcgaccgaaaactaagcgtggcagaaaagcgggaggaagtaacaaaggtaaagga
tttcgcaagagcggcaccgctgatttatcaagtaaacaaaaaatgcgaattgtttctaaa
gaaactatttcgacaagtgaatctgagagcgataatgaaaggcctaacatggcgagcgga
aacgaaagcggggaagaaaacgcagggcgaggaaggcgtagaatcgcatcggaatccgaa
ggttctcgtgcctcacgttccagatctcgttctaggtcaaagtctagcagccgttcaaag
agtggatcccgatcgcgttcaagaagcggttcacgatccaggagtggatctaggtccaga
tctacatctcgcaaaagtgcctcgaggtcgcgaaatcaatcacggtcacgctccagatct
aacagcggatcaagaaaaagtggttcgagatcgcgatccagatctagaggaagcagtggc
tcgaggaaaagtcactctaggtccagatccagatccggatccggctcacgatcgagatca
agatcaaaatctggttcaagatcacgatccagatcgaaatcaggatcaaggtcaagatca
cgatcaaggtcacgatcacgatcaagatcacgctcaggccaaagcaagtccaagagtagg
agtaggtcacggtccggatcaagatcgagatcgagatcaaaaagtggctccaggagtaga
agtgcgagcggatcagcaagatccgcaagtcctgtgtctcggaaatcgatatctggcagc
gaagatggttctcgccattcgagtccgcaaagaggtggacagagcggtagtgagtaa
DBGET
integrated database retrieval system
