Neodiprion fabricii: 124186356
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Entry
124186356 CDS
T08986
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
nfb
Neodiprion fabricii
Pathway
nfb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124186356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfb03041
]
124186356
Spliceosome [BR:
nfb03041
]
Complex B
Other components
Prp19-related factors
124186356
Complex C
124186356
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
SLFN-g3_helicase
AAA_22
AAA
AAA_16
UvrD_C_2
PhoH
nSTAND3
RecA_N
ATPase
DnaB_C
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
124186356
NCBI-ProteinID:
XP_046433939
LinkDB
All DBs
Position
7:128689..152764
Genome browser
AA seq
1459 aa
AA seq
DB search
MENPAVSLLVKTNNPAPTVDQINADRITQLANKYWAPHTTNSHLQFDPVIIEDIYIQEIC
ASKFSIRRIMMLEFSQYLENYLWPNYSTGETSHSHMMSIVVMLNEKFRERVQVWEAFSKN
PQHFPGFFQQVLEACLNESTMDFDLKEQTALIVFLNHCFNSMEVALVRNEVKRLVSLSMW
VSLQQGRREFEFRKFPKWRKYWKIIQKKDKPEIRQKLDWERRFLQRLMVKFMTILETVPL
EGAIFPDKIHYCERFLELVIDLEALLPTRRFFNTVMDDSHLVVRCQLSNLVQRPEGGLFN
QLLEMLKFYARFEISEETGDPLTDHDMTQLHYTKITSLQKAAFAKFPDLRSFALANVASV
DTREALYRHFGTLSQEKLRSIATYLNLVPPKEREVDENWYRLDLGFLRELLISRHERRAS
QLEELNEMPLYPTEEVVWNESIVPTEYFSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLE
STYEIRQDIEDSVSRLSPWRAEDGGVYYGGWARMAQPITQFAVVEVAKPNIGENRPSRVR
ADVTVNLSVRKEIKAEWENLRKHDVCFLISIKPPNTIGTKYSHKLPFVPQVGLTTVRGCE
IEGMLDSNGRVIEDGPEPRPVLPGENRTYRVWLDSNQYRIDMDNASHGREDVYEGFNIIM
RRKPKENNFKAVLETIRELMNTECVVPDWLHNIILGYGDPGAAQYARMPDEIAVMDFNDT
FLDIDHLRASFPGYEIKVEITEEEKLVRPFRLTFEEVLCKQNNQSDRKVIMVEPHVPPSR
GPYKANEPKRNQIPFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQIISNLYHNFPNQ
RTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALETEKDFSRYGRVNYVLAKRLD
LLMEVQRLQESLNVKGDVAYTCETAGHFFMYQILTRWERFNGRIKQRSGSNPSPNMVSQE
FPFHKFFDNAPQPLFKERSYSEDMEIAQGCFRYVERMFAQLEEFRAFELLRSGLDRSKYL
LVKEAKVIAMTCTHAALKRRELVDMGFKYDNILMEESAQILEIETFIPLLLQNPQDGYNR
LKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFARFVRLGVPTVDLDGQGRARPSICNLY
NWRYKKLGNLCHVERSPEYLIANAGFLFDFQLINVEDFNGVGESEPSAYFYQNLAEAEYC
VAVFMYMRLLGYPADKISILTTYNGQKHLIRDVINIRCANNPLIGRPNKVTTVDKYQGQQ
NDYILLSLVKTRAVGHLRDVRRLVVAMSRARLGLYVFARVALFKNCFELTPAFDQLMQRP
LKLHILPSEMYPAQRLNESLAASVNLLPEAVVIEDMPQMAKFVYDYYMDKVSTMKAQTHG
AKQWQEPGTTGRIASPTHHISAHPGADDDTDDEDEQARIQLSDDCADEKKLSGDVEKPKP
IQNLLEESTDDHSSASPEK
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatccagcagtttcactcctcgttaaaactaataatcctgcgcccacggtcgat
caaataaatgccgacagaataacacagttggccaacaaatattgggcacctcacacaacc
aactcacacctccagtttgatccagtaatcatcgaagatatatacatacaagagatatgt
gcttcaaagttttcaatcaggcgcataatgatgctcgaattcagccaatacctggaaaat
tatctttggccaaattatagtacaggagaaacgtcacacagtcacatgatgtcgatagtt
gtaatgctgaatgaaaaatttcgagagagagtccaagtctgggaagctttttcgaagaat
cctcaacattttcctggattttttcagcaagttctggaagcttgcttgaacgagagtaca
atggattttgatcttaaagaacagacggcgcttattgtttttttgaatcattgtttcaat
tctatggaagtagcgttagtgagaaatgaagttaagaggttggtgtcattgtcaatgtgg
gtatcactgcaacagggcagacgtgagtttgagtttagaaagtttcccaagtggagaaaa
tattggaaaattatacaaaagaaagataagccagagatcagacagaagttggactgggag
cggagattcctacagagattgatggtcaaatttatgactatcctggaaactgtaccactc
gagggagcaatttttcccgacaagatacattattgcgaaaggttcttggagttggttatc
gacttggaagctcttctgcctaccagacgtttcttcaacacagtcatggatgacagtcat
ttggtagtacggtgtcaactctccaacttggtgcaacgcccagagggaggtcttttcaac
cagcttttggagatgctcaagttttatgcaagattcgagataagcgaagaaaccggcgat
cccctcactgaccatgatatgacgcagttgcattatacaaaaatcacctcactgcagaaa
gctgccttcgccaagtttcctgatctgcggagctttgcactggcaaatgtagccagtgtt
gataccagagaggcactctatagacactttggcaccttgagtcaggagaagctgcgatcg
attgccacatacctgaaccttgtcccgccgaaagagcgagaggttgatgaaaattggtat
cgattggatctgggctttcttcgggaattactgatttcgaggcacgagcgtcgagcatcg
caacttgaagaattgaacgagatgccgctatacccgacggaggaggttgtctggaacgaa
agtatcgtgcccacggaatatttctccggcgaaggctgcctggcattgccgaaactgaat
cttcagtttctcacgcttcacgactacttgctgaggaatttcaatctcttcaggctcgaa
tcaacgtatgaaatcaggcaagatatcgaggactcggtcagcaggctcagtccatggcgt
gcggaggatggcggcgtgtattacggtggatgggccaggatggcacagccgataactcag
tttgcagttgttgaggttgctaagccgaatatcggggagaataggccgtcgcgcgtaaga
gccgacgtcactgtcaatctgagcgtgagaaaggaaatcaaggcagagtgggaaaacctg
aggaaacacgacgtttgctttttaatatcaatcaaacctcctaataccatcggaacgaaa
tacagtcacaaactgccgtttgtaccccaggttggtttgacaaccgtacgagggtgcgag
attgagggcatgctagattcgaatggtcgggtgatcgaggatggtcctgaaccaaggcct
gtactccccggcgagaatcgcacttaccgtgtttggctggactctaatcaataccgcatt
gatatggataacgcgagccatggcagagaggatgtgtatgaaggtttcaacataatcatg
aggcggaagccgaaggagaataacttcaaagctgtcctagagacgattagggaattgatg
aacaccgagtgtgttgtacccgattggcttcacaatataatattaggatacggggatccc
ggagctgcccaatacgcaagaatgcccgatgagatcgcagtaatggattttaacgacaca
tttctagacatagatcatctccgagcaagttttccggggtatgaaattaaagttgaaatc
accgaagaagagaaattagttcggccgtttcgacttacgtttgaggaagtcttatgcaag
cagaacaaccaatcggatagaaaagtgatcatggtcgaaccacacgtaccgccaagtcgc
ggcccctacaaggccaatgagcccaagagaaaccaaataccgttcacaccaacgcaagta
gaggcgatccgcgcaggaatgcagccagggctgacgttagtcgtcggtccgccggggacc
ggaaagacggacgttgccgtgcaaattatatcgaatttataccacaactttcccaatcaa
aggacattaatagtcacacattccaatcaggcattgaatcagttgtttgaaaaaatcatg
gccttagacatagatgagaggcatctgctccgtttaggtcacggcgaggaggcgcttgaa
accgaaaaagacttcagccgatacggtagggtcaactacgttctggcaaaacgtctggat
cttctcatggaagttcaaaggcttcaggagtctcttaatgtaaaaggagacgttgcgtac
acgtgcgaaactgctgggcacttctttatgtaccagatacttactaggtgggagcgcttc
aacggaagaatcaagcaaagatcgggaagcaatccctcgcctaacatggtttcacaagag
tttccattccacaagttctttgacaatgcaccacagcctctcttcaaggaaagatcttac
agcgaggatatggaaattgcccagggttgtttcagatatgtggagaggatgttcgctcaa
cttgaggaattccgtgcgttcgaattgctcagatcagggctggaccgttcaaagtattta
ctcgtgaaagaagcgaaggtaatcgcaatgacttgtacgcacgcagcgctcaagcgacgg
gaacttgtcgacatgggatttaaatacgacaacatccttatggaagagtccgcccaaata
ttggaaatcgagaccttcataccactgctgcttcaaaacccccaagatggttacaatcgt
ttgaagcgttggattatgatcggcgaccaccaccagttgccccctgtcattaaaaacatg
gccttccaaaaatattcaaatatggagcagtctttatttgcaaggttcgtcaggcttggt
gttcctaccgtcgatcttgacggccaaggtcgcgccagaccaagtatatgcaatctctac
aactggcggtacaaaaagctgggtaatctgtgtcatgtcgagcgtagtcctgaatatctt
attgccaacgctgggttcttattcgactttcaactcattaacgttgaagacttcaacggc
gttggcgagagcgaaccgagcgcttatttctatcagaatcttgccgaagctgagtactgc
gtcgcagtattcatgtacatgcgccttttaggatacccagctgacaaaatcagcatacta
accacctacaatggacagaagcatttaatacgcgacgtaataaacatcaggtgtgctaac
aacccgttgataggacgaccaaacaaagtgaccactgttgacaagtatcagggtcaacag
aacgactacatactgttgtcgttggtgaaaacacgagcagttggtcacttgagggatgtc
aggcggctggtagtggcaatgtcgcgagctcggcttggtttatacgtctttgccagggtc
gccttatttaaaaactgcttcgaacttacacccgcgttcgaccagctaatgcagcgaccc
cttaaattgcacattcttcctagcgaaatgtatccagcacaaagactcaatgaaagcttg
gcagcatcagttaaccttttgcccgaggctgtcgtcatcgaagacatgccccaaatggca
aaattcgtctatgattactatatggacaaagttagcaccatgaaagcacagacacacggt
gcaaaacaatggcaagaacctggtacaacgggccgcatcgctagccccacacatcacatt
tctgcacatcctggtgccgatgatgacactgatgacgaagatgaacaagctcgaattcag
ttaagcgatgactgcgctgatgaaaagaaactatcgggagatgtagaaaagccgaagcca
attcaaaatttgcttgaggaatcaacggacgatcattcgagcgcttctcccgagaaatga
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integrated database retrieval system
