Neodiprion fabricii: 124186601
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Entry
124186601 CDS
T08986
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
nfb
Neodiprion fabricii
Pathway
nfb04140
Autophagy - animal
nfb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124186601
04148 Efferocytosis
124186601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfb04131
]
124186601
Membrane trafficking [BR:
nfb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124186601
Hops complex
124186601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_11
zf-C3HC4_2
TPR_Vps41
zf_RING_Vps8
zf-RING_16
zf-RING_Vps41
zf-RING_2
zf-RING_5
zf-C3HC4
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING_UBOX
Glyco_hydro_81
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
124186601
NCBI-ProteinID:
XP_046434391
LinkDB
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Position
7:complement(1540171..1560886)
Genome browser
AA seq
1000 aa
AA seq
DB search
MTSIFDQYEQDSQRSKHPVAPSIRPDISTTGFIHMKLRDDGPIFTKQKVNFLPSDDITHL
AVSSNLIVIAMANNVLLRIDMKHPDKPEDIDISKYSANMKLSGLFLDPLGYHLLLAMVPS
KGDTPPAELFYLHRKTTKLKQAGKFRGHEITAVGWNFANTSETTSGPILLGTSKGLIFET
EIALDGDKIFNTSLEQYWRQLPNYLPLYGSKEVDGLVFDIGEESKPPITGLEFHRLGNSD
RYVVVVTTLIRIYQYIGSVTTLDEKPLLQQIFNRYLNAKERFNQLDSTLPYSKMQFYYSE
PKQLPKSFGWLTETGIVYAQIDPNVDPKNVLVNKKVITCPETSLIGGNISHSSERPLSFV
LTEFHTLLLYSDRVKGLCLLNQELIFEDIYNDAFGKLVNITKDPMTGSIWAFSERAVFKY
KVTKEDRNVWQIYVDKGEFDLAKKYCKDNPAHIDHVLVKQAEMLFGNKEYDQSAIIYADT
HSSFEEVSLKFLQEWQIEALKTFLKKKLEGLKPQDKTQVTMIVIWVVELFMNQMGALRGD
HTSHLHNPRYQELQKQFDSFLAIPKVEECIRMHKSSIYDLMASHGDKENLIRLTIMHRNY
EEVIRQHLYKNNYMEALNVLKSQGNRELFYQFAGTLLQELPKPTALALISQGSMLKPSKL
LPALVSCNNDEKHAQEVIRYLEFCIYKQGCQEQAIHNYLLSLYTRYKPDEVLRYISSQGQ
DIGMVPYDVHFALRLCQEVKLTKACVQLSALLGLWTAAVDLALTISVDLAKQIASMPSQN
DDELRKKLWLKIAEHVVRERDDIKQAMEFLQQCDLVRIEDILPFFSDFVTIDHFKDAICN
SLQEYNQHIQDLKEEMEEGTKAAELIRKDIQSFRNRCIFIPAKDTCNTCDVQLLLRSFYV
FPCGHRFHSDCLVAALIPMLSMEQRTKLADLQRQLTTVSGKAEDTNSIGSVSLSTKDQIK
ADIDDLIASECIYCGELMIESIDKPFIEEEDYERVMKEWD
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatattcgatcagtacgagcaagattctcagaggtcaaaacatcctgtggct
ccgtctatcaggcctgatattagcacgactggattcattcacatgaagcttcgggatgat
ggtcccatattcaccaaacagaaggtgaatttcttgccctcggacgatatcacgcatctc
gcagtcagcagcaacttgattgtcatcgccatggccaacaacgttctattacgcatagac
atgaagcacccagacaaacctgaggacatcgacatctcaaagtactcggcgaacatgaaa
ttgtccggtctttttctggatccccttggatatcatctgctactcgcaatggttcctagc
aaaggggacactccgcctgcagagctcttttatctgcacagaaaaacaacaaaacttaag
caggctggaaaattcagaggtcacgagatcactgctgtaggatggaatttcgccaacact
tcagagaccacctcgggtcctatactgctcggaacgtcaaaggggctgatttttgagact
gaaatcgcgcttgatggtgacaagatatttaacacgagcctggagcagtattggaggcag
cttcccaattatctgcctctctacggcagtaaagaggtagacggactcgtattcgacata
ggcgaggagagtaagccgcccatcacaggtctggagtttcatagattgggaaacagtgac
agatacgtagtggtggttacaactctgatcaggatttaccagtacattggctccgtcact
actttggacgagaagccgctgcttcagcagattttcaacagatatttaaacgccaaggag
agattcaatcagttggacagcaccctgccttattcaaaaatgcagttctattactcggaa
cccaaacagctgccaaagtcttttggctggttgactgaaaccggtatagtatacgctcag
atcgatcccaacgtcgacccgaaaaacgtgttggtgaataaaaaggtgataacgtgtccg
gaaacgagtctgattggtggaaacatttcgcattcatcggaaaggccgctatcgtttgtg
ctgaccgaatttcatacgctgcttttgtactcggaccgcgtcaagggactttgccttctc
aaccaagagctgatctttgaggacatctacaacgatgcattcggcaagctcgtcaacata
actaaggatcccatgacaggctctatatgggcctttagcgaacgcgccgtcttcaaatac
aaagtcaccaaggaggacaggaacgtttggcagatttacgttgacaagggtgaattcgat
ctggccaagaaatactgtaaggataacccggcgcacatcgatcacgtgctcgtaaaacag
gcggaaatgttatttggaaacaaggaatacgatcagagcgcgatcatttacgccgacacg
cactcgtcgttcgaggaggtgtcattaaaatttttgcaggagtggcaaattgaggcattg
aaaacgtttctgaaaaagaaattagagggactcaaaccgcaggataaaactcaggtgaca
atgatagtcatctgggttgtggaactattcatgaaccaaatgggtgctctgagaggcgac
cacacttcgcatctccataatccgcgatatcaagaactgcagaaacagtttgatagcttt
ttggcaataccgaaagttgaggagtgcatccgaatgcacaaaagctcgatatacgacttg
atggcgagccacggagacaaggagaacttgattcgcctgacgataatgcaccgcaactac
gaggaagtaatacgccagcatctgtacaaaaacaactatatggaggctctgaacgttctg
aaaagtcaggggaacagagaattgttctatcaattcgcaggcacgctcttgcaggagctt
ccgaaacccactgcactcgcgctcatctctcaaggctcgatgctcaagccgtccaagctt
ctgcctgctctggtctcctgcaacaatgacgagaaacacgcccaggaagtgattcgctac
ctggaattctgcatctacaaacaaggatgccaggagcaggcgatacacaattaccttctg
tctctgtacacacgctacaagccagacgaggtgctgcgatacatcagttcccaaggtcaa
gatatcggcatggttccgtacgacgttcattttgcactgcggctctgtcaggaggtgaaa
ctaaccaaggcctgtgtccagctatcagcgctgcttgggctctggacggcagcggttgac
ttggcgttgacgataagcgtcgatttggccaagcagatcgcctctatgccttcgcagaac
gacgacgagctaaggaagaagctttggctaaaaatagctgagcatgtggtgagagagcgg
gatgatatcaaacaggcaatggagtttctgcagcagtgcgatttggtcagaatcgaagac
attcttccgtttttctcggatttcgtaaccatcgatcatttcaaagacgccatctgcaac
tctttacaggagtataatcaacacatccaagatctcaaggaggagatggaagaggggacc
aaggcagcggagctgatcaggaaagatatacagtcgtttagaaacagatgcattttcatc
ccggccaaggacacctgcaacacttgcgatgttcagctgctgctcaggtcgttttatgta
tttccctgtggccacagattccacagcgattgtcttgtcgccgccctcattcccatgctc
tccatggagcagagaacgaagctcgccgatctccagcgtcagttaaccaccgtttctggg
aaagcggaggacacaaattccatcggctcagtttccctgtccaccaaagatcagatcaaa
gctgacatcgacgatcttatcgcttccgagtgcatctactgcggagagctgatgatcgaa
tcgatagacaagccgttcatcgaggaggaagattacgagagagtgatgaaagagtgggac
tga
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