Neodiprion fabricii: 124186885
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Entry
124186885 CDS
T08986
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124186885
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124186885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EF3_N
HEAT_2
TPR_Trm732_C
CEP104-like_TOG
HEAT_EZ
HEAT_ECM29
RIX1
Motif
Other DBs
NCBI-GeneID:
124186885
NCBI-ProteinID:
XP_046434926
LinkDB
All DBs
Position
7:complement(5661753..5675907)
Genome browser
AA seq
1925 aa
AA seq
DB search
MTSRLDRLFVLLETGSSAITRRAAAQQLGEAQRLHPHELHHLLARVSTLLKSPQWDTRVA
AAHAVQAILAQVPQWDPKPLHLNVPDAQLQQDETEDGQVRQFSKVNRLSLRDFDMARVLA
RSLHLTGSEGSEYDLVVAETSEPPNPQQTEKMFAAKFGLHPRLMGIDTNELFTNDDFAPS
VQTSGASQTKMPIDETMCQPSGLSRREMNRARRKARQSISKQRSREPDDMQDHQSSVTSG
SNEPYVKRPKQEENATSEASWSGDEGGNWGVPDGTGCWPDTAVEWPLDSFAESLCQDLFS
QKWEVRHGAATALRELVRLHGKGAGKSRDQTKEEMEESHRRWVEDAALRLLCVLGLDRFG
DFVSDQVVAPVRETCAQALGSLLLLMPCTDNSENRENGQKTIKVEVKTEGDSDKIKEGGA
LGVLSVVLKLLEHNEWEARHGALLALKYLLAVRDDLLDELLPRAFPAAMHGLADPVDDVG
AAAASALIPVAGVLPKLLTPSQLEAVVLRLWELLREQDDLAAACNSFMGLLAAILSLPAA
REHLTPQPLSKVLPRLWPFLGHSSSSVRKATLQTLLTLTGDDGNPKDEQDRWGDAGGSVL
QEALRQVFQRALVEHVAAIQEVAERVWQNLVVRSDLQLLLHASCPLVSTWLCLAMQPEHV
PFSPALLVTATTTQHSSRVTKSCGGNGSDAQSDSSSSGGCGSGGKSASELKVYIGGVETV
APATRRSNVVRARCMAARMLGLLSCYVVRPAPGVIYTADTPSPALCYAKVLLVHLASRSA
LQRTVAGLTMAHWATLEQPHPPTIPDILKEKLLGCLSECVYYDEIAVTFTRLLQETRDYI
ATLKHYKLPLKEGTGLDASAISTGVMTLEQITILTGKTVSSLLNLGTAAGSGNTAVKLKP
KVLDSLEERRRAIESGATATAMQQHALNITSMAALAGAATMLRCLPGADCPLNPLVKPLM
ESIKREENDELQSLAARHLAHLIDLCVERKPSPNHKIASNLCMFLCSDPEFTPRIVGDSQ
PFEGILTLTNRHRHAERVAYNRGGFGGNGGRGPGRPPTTEIPLEELLAYEEPEAKAAKTR
RRGATLALTSVTKLLGAQLSSRLPRLWELMLPAALKNSGPDECSYQQDHQEEATQLVSSL
QVLETVASSLDASLLPPAIACVPRLCNLLAHPYRAVRHMAARCIAVLGTLRTEEVMRLVV
RSVIPLLEPSIEKDSSSTDKVKIIAPAEIDAKRQGAAESLACLVESLGVGIVPYAVLLVV
PLLGRMSDQNQAVRLTCSATFATLVQLMPLDPGAIGDPPLLGDEKAQERHFLEQLLNPRS
IPDTKLPVPVSAELRAYQHQGLNWLAFLNRYRLHGVLCDDMGLGKTLQTLCMLATDHYHH
PQTFPSLVVCPPTLTGHWVYEAEKFFKPKDLSALQYAGPPPEREKLRPRVSRYRLVVASY
DIVRKDIEFFESIQWNYCILDEGHIIKNGKTKSAKAAKRLRAHHRLILSGTPVQNDVLEL
WSLFDFLMPGFLGSEKQFAARYSRPILASREPKAGAKDQEAGALAMEALHRQVLPFLLRR
NKEDVLQDLPPKITQDYYCDLSPLQRTLYEDFRTRHSATLTSPAPANNSLGTHVFQALRY
LRNVCNHPKLVLTPRHPQYHYVCASLKHQQSSLTDIEHGAKLPALKQLLLDCGIGQQQQQ
PVSMTAITTTDGQQQQLVSQHRALIFCQLKAMLDIVEKDLLRVHLPTVTYLRLDGSVPAS
QRHSVVARFNADPSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIG
QKKVVNVYRLITRATLEEKIMGLQKFKLLTANTVITTENASMETMGTDQLLDLFSLDTSK
DKRVDGQGGSGSVDGSESGFSGIVGVGRSVLESLPDLWEQQQYDDEYDLESFLSTLRGDN
QPSPV
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacggttggatcgactttttgtacttttggaaactggatctagtgctataact
agaagagccgcagctcaacagcttggcgaggcccaacggctgcatccgcatgaactgcat
catcttttagccagagtttctacattattgaagtcacctcagtgggatacaagggtggcc
gctgcccacgccgttcaagcaatacttgcccaagttccacaatgggacccgaaaccccta
cacctaaatgtgcctgacgcccaactgcaacaagatgaaaccgaggatgggcaagtacgt
cagttcagtaaagtcaacagactcagcttgcgagattttgatatggcaagagtgttggca
cgtagtttacatttaaccggatctgagggtagcgagtacgacttagttgtagctgagaca
agtgagccgcccaacccgcagcaaacagaaaaaatgtttgccgcaaaattcggtctccat
cctcgacttatgggcatcgataccaatgaattattcacgaatgacgattttgcaccatcg
gtgcaaacgtctggtgcgtcgcaaacaaaaatgcccattgacgagacaatgtgccaaccc
agtggtcttagccgtcgagaaatgaatcgtgcacggcgtaaggcacgtcagtcaatttca
aagcaacgttccagggagcccgacgatatgcaagatcaccaaagttcggtaacaagcggc
agtaacgaaccatatgttaaaaggccaaaacaagaagaaaacgcaacgtctgaagcatcg
tggagtggcgatgagggaggaaactggggagtcccagacggaaccggatgttggcctgac
actgctgtcgagtggccgctcgattcattcgcggagagtctttgtcaggacctgttcagc
cagaaatgggaagttcgtcatggtgctgcgacagcgttgcgtgaacttgttcggctacat
ggaaaaggtgccggcaagtcacgagatcaaacaaaagaagagatggaagaaagtcaccgt
cgatgggtagaagacgctgcgttgcgactgctttgcgttttgggtctggacagatttggt
gactttgtctcagatcaagtcgtagctccagttcgtgagacttgcgctcaggcacttggt
tccctattattgttaatgccatgtaccgacaattcagaaaaccgtgaaaatgggcagaaa
acaatcaaggtggaggtcaaaacggaaggagatagtgacaaaattaaggagggcggagca
ttgggggttttgtccgttgtcctgaaactactcgaacataacgagtgggaagccagacac
ggtgcccttttggcactaaaatatttgctcgctgttcgagatgatcttctcgatgaactg
ctaccaagggcatttccagcagccatgcacgggctcgccgatccagtggacgacgttggt
gctgcggcggcaagtgctttgattccggtagctggcgtcttgcccaaacttctcacaccg
tcgcaacttgaagctgttgttctgcggctttgggagttgctgcgtgaacaggatgatctg
gccgctgcctgcaacagcttcatgggtctactcgctgcgattttatctttacctgctgcc
cgtgaacatcttacgccgcaacctttatccaaggttttaccgaggttgtggccgttctta
ggtcactcaagttcgagcgtgagaaaagccacgttacagacgctgcttacacttacggga
gacgatggaaatccgaaagatgagcaggatcggtggggggacgccggtggcagcgttttg
caggaagctttgcgtcaggtgtttcagcgcgcattagttgaacacgtggctgctatacaa
gaagtggcggagcgagtgtggcagaatctcgtcgtacggagtgaccttcagttgctgctg
cacgcttcctgtcctctcgttagcacgtggctttgtcttgccatgcaaccagaacacgta
ccgtttagtcccgctctgctggtgaccgctacaacaactcagcatagctcaagagtgaca
aaaagttgcggtggtaacggaagcgacgctcaatccgattcgagcagtagcggtggttgc
ggaagtggcggcaagtcagcgtcggagttgaaggtctacatagggggtgtagaaactgta
gctccagcaacacgtcgatctaatgttgttcgtgcacgttgtatggcagcaagaatgctt
ggcctactttcatgctatgtagtccgccctgctccaggggtaatttacacggcagataca
ccgagtcctgcactttgctacgcaaaagttctgctggtccatttagcctcacgatccgcc
ctgcaacgcacggtcgcgggactcacaatggcccattgggcaaccttagaacaaccccat
ccgccgacgatacctgatattctcaaggagaagctcttgggctgtctgagtgagtgcgtt
tactacgatgagattgctgtgaccttcactcgtttgctacaagagacgcgtgactatatc
gctactttaaagcactacaagttgccgctcaaggaaggaaccggtctcgatgcatcagca
ataagtacaggggtgatgactcttgagcaaatcactatacttacggggaaaactgtttcg
agcctgttaaacttgggaactgctgctgggagcggcaataccgcagtgaaattgaaaccc
aaagtgttggacagtttggaggaacgaagacgtgccatagaatcaggtgctactgcaact
gcgatgcaacagcatgcgctcaatataacatccatggcagcgctcgcaggagctgcgaca
atgctgcgctgtcttccgggcgcagattgccccctgaaccctctcgtaaagccgctcatg
gaatcgataaagcgggaagaaaatgatgaattgcaaagtcttgctgcacgccatctcgca
cacctcatagatctctgcgtggaaaggaaaccctctccaaatcacaaaattgcttcaaac
ttgtgtatgtttctttgctcggatccggagtttacaccacggatagtaggggacagtcag
ccatttgagggtattctcacattgacgaacagacatcgacacgcagaaagagttgcttac
aatcgtggtggttttgggggtaacggaggtcgcggtcctgggagaccaccgacaacggaa
atacctctcgaagagttactagcatatgaagaaccggaagcgaaggcggcgaaaactcgt
cgccgtggtgcaaccttggcgcttacttccgtaacaaagttacttggagcccagctatct
tcgcgtctaccacgtctctgggaattgatgttaccagcggctctcaaaaactctggtccc
gacgaatgttcctatcagcaagaccatcaggaagaagcgactcaattggtgtccagtctt
caagtactggaaacagtcgcctcaagtcttgacgcgtcccttttaccgcccgcgattgca
tgtgtaccacgactttgcaatcttttggcacacccttacagagctgtcagacacatggct
gcccgttgcattgctgtattaggcactctgcgcaccgaagaggtaatgaggctggtagtt
cgaagcgtaataccactcttagagccgagtattgagaaagacagttcaagtacggataaa
gtcaagataatagcccctgctgaaatagatgctaaacgtcaaggagcagccgaatcactc
gcttgtttggtggagagcttaggcgtagggattgttccatatgctgttcttctcgttgta
cctttacttgggcgaatgagtgatcaaaatcaagctgtacgcctcacctgcagcgcaacc
tttgcgactcttgttcaactcatgccactcgatcctggagcaattggagatccaccccta
cttggtgatgaaaaagctcaagaaagacattttctggaacaactactaaatccacgaagc
attcctgatactaaattgccggtcccagtgtcggctgaactacgtgcttatcaacaccag
ggattaaattggcttgcctttttgaaccgttaccggctccatggagttttgtgcgacgac
atgggtctcggaaagactttgcagacattgtgcatgttggccaccgatcactatcatcat
ccgcaaacatttccgagtctcgttgtttgcccgcctactttgactggccactgggtttac
gaggctgaaaaattcttcaaaccaaaggatctgtcagccttgcaatacgccggaccacca
ccggaacgtgaaaagttacgtccacgggtatctcggtaccggttagttgtcgccagctac
gatatcgtaaggaaagatattgaatttttcgaatccattcaatggaattattgtatactc
gacgagggacacattattaaaaatgggaaaacaaaaagtgcgaaagctgccaaacggctc
agggcacatcatcgtctgatactctccggcacaccggtgcaaaatgatgtcctcgagtta
tggtctcttttcgactttctcatgcctggattccttggtagtgagaaacagtttgcagca
cgttattcacgacctatattagctagccgagaaccgaaagcaggagcaaaagatcaggaa
gcaggcgcgttggctatggaagcactccatcgtcaggtgttaccttttttactgaggcgc
aacaaagaggatgtattgcaagacctacctccgaaaattactcaggattactactgcgac
ctgtccccgttacaacgtactctctacgaagatttccgtacccgacattccgcgactctt
accagcccagcgccggctaataattcattgggtacacacgttttccaggctctacgttat
ctccgaaatgtctgcaatcatccaaaattagtgcttaccccgcggcatccgcaatatcat
tacgtatgcgcttcacttaagcatcaacagagttctctcaccgacatcgaacacggtgcc
aaacttcccgcactgaagcaactcttgctagattgcggtatcggtcagcaacagcagcaa
ccagtctcaatgactgctataacgacgactgatggccagcagcaacaattggtcagccag
catcgagccctgatcttctgccagctaaaagctatgctggatatcgtggaaaaagacttg
ctgcgagttcatttacccacagttacctatttacgtcttgacggaagcgtaccggcgtca
caacgccattctgttgttgcccgtttcaacgccgatccgtcgatcgacgttttactttta
actactcaagtcggcggtctgggattgaatctaaccggagcagatacagtgatattcgtt
gagcacgactggaatccaatgaaagatctacaggcaatggatcgagcgcatcgtatcgga
cagaagaaagttgtcaatgtttatcgattgattacgagggcaacactcgaagaaaagatc
atgggattgcaaaagttcaaacttctcactgccaacactgtcatcacgacggaaaacgca
tctatggagaccatgggaacagatcagttactggacctgttctcgttggacactagcaag
gataaaagggtggatggacagggaggttctggtagtgttgatggaagtgagtctggattt
tccggcatcgttggagttggtcgttctgtgttagaaagtctcccagatctttgggagcag
caacagtacgatgacgaatacgatcttgagtctttcctttcaacgctacgtggtgataat
caaccaagtcctgtttag
DBGET
integrated database retrieval system
