KEGG   Neodiprion fabricii: 124186888
Entry
124186888         CDS       T08986                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
nfb  Neodiprion fabricii
Pathway
nfb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nfb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124186888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfb03019]
    124186888
   03041 Spliceosome [BR:nfb03041]
    124186888
Messenger RNA biogenesis [BR:nfb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     124186888
Spliceosome [BR:nfb03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    124186888
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd BBS2_Mid Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 124186888
NCBI-ProteinID: XP_046434936
LinkDB
Position
7:5706192..5708635
AA seq 335 aa
MLEQKSCGMNEKSFYNTVQCQTFSADGNYLLAGNIYGDVSVYELSKVLGPYHGDDCDPRG
PNYQFTAYKQQQVHSIIATDKFLITGTVGEISGWDWKVVTSNKVSKIKVSWTIHIPTVKD
SYVKPDVNYMLISHEDNTLHAGCGDNKIYTFSLEDGKLLRTLEGHEDFIHALSILGNQLA
SASEDGSVRLWDMRKKENTNVVKPFLADKVNRPKLGKWIGTVDFTEDWLLCGGGPKLALW
HMRTMEVATIFDLPDQGIHVGSIHEERIIAGGAMPNVHHLTYQGEVLAEVPTSSNTIYSI
VHQESPQKLLSMAGSSNNIDICTNFSYREMVLKFA
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgctagaacaaaaatcttgcggtatgaacgagaaatcattttacaacactgttcaatgt
caaactttttctgccgatgggaattatttattagctgggaacatatatggcgacgtttct
gtctatgagttgtctaaggtactgggtccctatcatggagatgactgtgatccaagaggg
ccgaattatcaattcactgcgtataaacaacaacaagttcacagcattatagccactgat
aaatttctgattaccggaacggtaggagaaatatctggatgggactggaaggttgtgact
tctaataaagtatctaaaattaaagtttcctggacgattcacataccaaccgttaaggac
agctacgttaagccagatgtcaactacatgctaatttcacacgaagacaacacattacat
gctggttgcggtgataataagatatatacgttcagcttagaagatggaaaattactcaga
acacttgaaggtcacgaggatttcatccatgctctttcaattttaggaaatcagctggca
tctgctagtgaagatgggtcagtaagactgtgggacatgagaaaaaaagaaaacacaaat
gtcgtgaagcctttcttagcagacaaagtgaacagacccaaactcggcaagtggattgga
actgttgattttacggaagattggcttctctgtggaggtggtccaaaattggctctctgg
cacatgcgaactatggaagtggctactatatttgacttacctgaccaaggtattcacgtt
ggatctattcacgaggagagaattattgctggaggagcaatgccaaacgtccaccatctc
acttaccaaggagaagtgttagctgaagttccaacatcgagcaatacaatttattctatt
gttcatcaagagagtccacaaaaattattgagtatggctggatcaagcaataatattgac
atttgtacaaatttcagttacagagaaatggtactgaaatttgcttga

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