Neodiprion fabricii: 124187217
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Entry
124187217 CDS
T08986
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
nfb
Neodiprion fabricii
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124187217
03036 Chromosome and associated proteins [BR:
nfb03036
]
124187217
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124187217
Chromosome and associated proteins [BR:
nfb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124187217
SLIK complex
124187217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_Hrp3
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
DEAD
Motif
Other DBs
NCBI-GeneID:
124187217
NCBI-ProteinID:
XP_046435557
LinkDB
All DBs
Position
7:17668557..17685281
Genome browser
AA seq
1835 aa
AA seq
DB search
MMQKTLDSESGKESGSDSENESKSDSSSSGSNSGSGSGSDSDSSSSSGSGSASGSDSEKS
DKSSKSDTPAQSVSIQSKSSVHSSETKVRHKSDSSREWDENPDVYGIRRSGRSRKEPERL
TTQRESDGDVRRKVQKKSTQNSWNSDSSESESDEATKRRPPPSKSINRRAAQKVKENTRS
RHKRISESSENSSFDSDDNRRQVTRRAGTAVSYKEQSEEGTDSEDIVEVDEALATPLEPD
NAETIERILGQRRGKKGVTGNVTTVYAVEENGDLNPTNLADEEAETQYLIKWKGWSHIHN
TWESEDSLKAQKVKGIKKLENFVKREREIKQWRDYAGPEDIDYFECQLELQQDLLKSYNY
VERIIAEYNKPDSGHPDYYCKWESLPYADATWEDGALIIKKWPEKIKEFRDREDSKRTPS
KHCKVLKYRPKFHQVKGQPEYMGRGKDLVLRDYQMDGLNWLIHSWCKENSVILADEMGLG
KTIQTICFLYYLFHTQQLYGPFLLVVPLSTMTSWQREMAQWAPDMNFVTYLGDVTSRNVI
REFEWCYSSKRLKFNAILTTYEIVLKDKTFLGAINWAALLVDEAHRLKNDDSLLYKALTE
FHTNHRLLITGTPLQNSLKELWALLHFIMPNKFNSWEEFEKEHDNAAQKGYSKLHRQLEP
FILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTTTFLNIV
IELKKCCNHAFLTKPTDGERRESNEDYLQQIIRGSGKLVLLDKLLVRLRETGHRVLIFSQ
MVRMLDILGEYLQKRHFPFQRLDGSIKGELRKQALDHFNADGSTDFCFLLSTRAGGLGIN
LATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVL
DHLVIQRMDTTGRTVLDKKGPNTNNNPFNKEDLNAILKFGAEELFKDEEDGDEEPTCDID
EILRRAETRDEAPATVGDELLSAFKVASFAAFEEETEPIPQLNEIDDESKDWAEIIPENF
RKKLEEAEKSKEMEDLYLPPRSRKTLQQINQSGEEGRGRKRRKTTGDDSEDAEDSGSEAE
GTDDERPKKRGRPRVTPRENMKSFTDAEIRRFVKSYKKFGAPLKRLDDIAADAELQEKPM
SELRYLGEQLRIRCEACLAEFETIAKENKGTEEEGRGPGRKRGRGPTFKVGGVMVNAKSL
SAAEKELEPLDAALPADSEQRANWHLDIKLKPANFDCDWTPDDDSRLLRGIYHHGMGSWE
AIKLDANYKLGDKILPHNDSKPQVKQLNTRAEYLLKVLKKQMDLKLGVTRTRKPRKPKEV
KTVITKEIVEENDSSGDENKKLKLKLDKQPVKKEEEPLCKKEPKEEGEVTSDDKKKDKKL
KKEKKESRRGKKNKQPVGPMHFTANNEPRALDVLGDLDPSIFNECKEKMRPVKKALKALD
RPDQSLSQSEQVTHTRQCLVQIGNQINICLAEYKDPELIKEWRSNLWYFVSKFTEFDAKK
LYKLYKHATKKDETSSNPVSSPEKKEETVNPKKHSEKLHDKHSEKHSEKHVERHTDKWSD
NSQSKDSSSKDSQRQQVKRRIDEVEENSNSSTPNKKHQSITSVANSTTTGSTTTVTTTTT
TTPIAANTLMANSNSNSSNSLSSEQPSRHKEPKEIKHKEMKRDRDRDRERERSHGERGLD
RLGGAKDERVRRDSGGYNIGGHYSGGREDDHWVPRDGRDPRDSRFGDHKRERFESYGRMP
SGYHRDRDRERDRGMHMNEKRSDYYRYPPGPPGYGYGGPGSYGSGSSGGYPPSDLPPGHF
RGRAYPGDGYPGDWRPNKDYRRDYDRRPPPPNANS
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaaaactttagattctgagtctggtaaggaatctggttcagattcggagaac
gagagtaagagcgacagctcatcatccggaagcaactccggatctggttctggatcagac
agtgactctagctcctcaagcggttctggttcagcatcaggttcggactctgaaaagtca
gataaatcgtcgaaatcggatactcctgcacaaagcgttagcattcaaagtaaaagctcg
gtacatagctcagagacaaaagttcgacataaaagcgactcgagtcgtgaatgggatgaa
aacccagacgtttatggaatccgaagatcggggagatcccgcaaggaaccagagaggctc
actacgcaacgcgaaagcgacggcgatgtacgacggaaggttcaaaaaaaaagtactcaa
aattcctggaattctgacagttcagaatcagaatcggatgaagctactaaacggagacct
ccgccaagtaaatcgataaatcgtcgagcagcgcaaaaggtgaaagaaaacacccgttca
cgtcataaacgaatatcagaatcctcggagaattcttcgtttgacagcgatgataatcga
aggcaagtcacgcgacgggctggaacggcagtcagttacaaagaacagagcgaagagggg
actgatagtgaggatatagtcgaggttgacgaagcattggcgactccgttggaaccagat
aatgccgaaaccattgaacgaattttggggcagagaagaggaaaaaaaggagttactgga
aatgtgacgactgtctatgctgttgaagaaaacggtgatctgaatcctacaaatttggcg
gacgaagaagccgagacgcagtatctaataaaatggaaaggctggtcgcatatacacaat
acgtgggaatcagaggattctttgaaggcgcaaaaggtgaagggtattaaaaaattagaa
aatttcgtgaagcgagaacgggaaatcaaacagtggagagactatgctggacctgaagat
atagactacttcgaatgtcagctggaacttcaacaggatttattgaaaagctacaattac
gtagaacggataattgctgaatataacaaaccggattctggacatccagattattattgt
aaatgggaaagtttaccatatgccgatgcgacgtgggaagatggagctttgataataaaa
aaatggcctgagaagatcaaggaatttcgcgatagggaagattcgaaaagaacaccgagt
aaacactgtaaagtattaaagtatagaccaaaatttcatcaagtcaaagggcagcccgaa
tacatgggaagggggaaagatttagtcttgagagactatcaaatggacggattaaactgg
ttgattcattcttggtgtaaagagaatagtgtgattctcgcggatgagatgggtctggga
aaaactatacaaactatatgcttcctttactacctttttcacacgcaacagttgtatgga
ccatttttattggttgtaccattatctacgatgacgtcttggcaaagagaaatggcacag
tgggcaccagatatgaattttgtaacttatcttggtgatgtgacgtctaggaacgtgatc
agggagttcgaatggtgttatagttcaaagaggttgaaattcaacgcaattttgacgacg
tacgaaatagttttgaaggataaaacgttcttgggggccataaattgggccgcactgctc
gtcgacgaggcgcatcgtctcaaaaatgatgattcacttttatacaaagcattgacagag
tttcataccaatcatagacttcttatcaccggaactccgttgcaaaacagtttgaaagag
ttgtgggcattgctgcattttataatgcctaacaaattcaactcttgggaagaatttgaa
aaagaacatgacaacgcggcgcaaaagggttactcgaagcttcacaggcaattggaacca
ttcattttgcgccgagtgaaaaaagatgtagagaaatcattgccggctaaagtcgaacag
atattacgtgtcgagatgacctctttgcaaaaacagtattacaagtggatacttactaaa
aattataatgcccttcgtaagggtgttaagggatcgacgacaacgtttctcaacattgtt
atagagttgaaaaaatgttgcaatcatgcattcctaactaagccaacggacggtgaaagg
cgagaaagcaacgaggattatttacaacagataattcgtggatcgggaaaattggttttg
ttggataaactgttagtacgactccgagaaactggtcacagagttttgatattcagccag
atggtcagaatgttggacatcttgggagaatatctgcaaaaaagacattttccctttcaa
agattagatggaagcataaagggagagctcagaaagcaagcgctggatcatttcaatgca
gatggctcgacagacttctgctttttactgtcaaccagagctggtggtcttggaattaat
ttggcaacagctgatactgttatcatatttgattctgattggaacccgcagaacgatctg
caagcccaggctagagctcatcgtataggtcaaaaaaaccaggtgaacatatacagattg
gtgacaaagaattccgtggaagaagaaatagttgaacgtgcaaaacaaaaaatggtgctc
gaccatttagtaatacagagaatggatacaacgggaagaacggtcttggacaaaaagggt
cccaacacaaataataacccttttaacaaggaggatctaaatgctattctgaagttcggt
gccgaagaattgttcaaagatgaagaagacggggatgaggagcccacttgtgacattgat
gaaatactgcgacgtgctgaaaccagagacgaagccccggccacagtaggagatgaactc
ttatcggcgttcaaagttgccagttttgccgctttcgaagaagagacagagccgattcct
caacttaatgaaattgacgatgaaagtaaagattgggctgagattattcctgaaaatttt
aggaaaaagcttgaggaagcggaaaaatctaaggaaatggaggatctgtatctaccaccc
agaagtcggaagactcttcagcaaatcaatcaatctggtgaagaaggaaggggtagaaaa
cgcagaaaaactacgggcgacgacagcgaagatgctgaagattcgggaagcgaggcagaa
ggcaccgatgatgagaggcctaaaaagcggggtagaccaagagtcactcctagagaaaat
atgaagagttttaccgacgccgagattcgaaggttcgtcaagagctacaagaagtttggg
gctccgctgaaaagattagacgatattgcagccgatgccgaattgcaagagaagcctatg
tctgagttgcgttacttgggcgagcagctaagaatcagatgcgaggcttgcttagcagag
tttgaaactatcgctaaagaaaataaagggactgaagaggaaggccgtggcccagggcgg
aaaagaggaagaggtccaaccttcaaagttggcggcgttatggttaatgcaaaatccctt
tctgctgctgaaaaagaattagaaccgctcgatgccgcactccctgcagattccgaacag
agagccaattggcaccttgatataaaattaaaaccggcgaactttgactgcgattggact
ccagacgatgactcgaggttacttagaggaatttatcatcatggaatgggatcttgggag
gcgattaaattggacgcaaattataaacttggtgacaaaattctccctcacaacgacagt
aaacctcaagttaaacagttaaacacacgagctgagtatttattgaaagtgctcaaaaag
cagatggaccttaaacttggagtgaccagaacgagaaagcctcggaagcctaaggaagta
aaaactgtcattactaaagaaattgtcgaggagaatgacagttcgggagatgaaaataaa
aagctcaagcttaaactggacaagcaaccggttaaaaaggaggaagagcctttgtgcaag
aaagagccgaaagaagaaggcgaggttacgtcggatgataagaaaaaggataaaaaactg
aagaaagagaagaaagagagtagaagagggaagaaaaacaaacaacctgtcggtccaatg
cattttacggccaacaatgagcctagagctcttgatgttcttggtgatcttgatccgtct
atatttaacgagtgcaaggaaaaaatgcggcccgtcaaaaaagctctgaaagctttggat
aggccggatcagtctttaagtcagagtgaacaagtaacgcataccaggcaatgcctcgtt
caaattgggaatcagataaatatttgtctggccgagtacaaggatcccgaacttataaaa
gagtggagaagtaatctatggtatttcgtgtctaaatttacggaatttgacgcgaaaaaa
ttatacaagttgtataaacatgcgactaagaaggatgagactagctcgaatccagtatcc
agccccgaaaagaaggaagaaactgtcaatccgaagaagcatagtgaaaaactacacgat
aagcacagtgagaagcatagtgagaaacatgttgaaagacatacggataagtggagcgat
aattcacaatccaaagatagtagcagcaaagattcacagagacaacaggtgaaacgtaga
atagacgaagtggaggagaattcaaatagcagtactccaaacaaaaaacatcaatctatt
acctcggttgcaaatagtacgacgactggttccacgacgacggtaacaacaaccacaaca
acgacgccaattgctgcgaacactttgatggcaaactcgaattcgaattccagtaattca
ttgagtagcgaacaaccgtccagacacaaggaaccaaaagaaatcaaacataaggaaatg
aaaagagacagagatcgagatagggaaagggaaagatcccacggcgaaagaggtttggat
agattaggcggagcgaaagatgagagagtgaggagagacagcggaggttacaacatcggt
ggtcattacagtggaggacgcgaagacgatcattgggtacccagagacggtagagatcct
cgagacagcaggtttggagatcataaacgagaaagattcgaatcttacggacgtatgcct
agcggttatcatcgcgacagagacagagaacgtgatcgcggcatgcatatgaacgagaaa
cgaagtgattactatagatatcctccaggacctccgggttatggatatggtggtccagga
agttatggaagcggaagcagcggtggttatccaccctcagatctaccgcctggacatttc
agaggacgagcatacccaggggatggatatcctggtgattggaggcccaacaaagactat
agacgtgattacgaccgtaggccacctccgccgaatgcaaattcctag
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integrated database retrieval system
