Nocardioides faecalis: KG111_02925
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Entry
KG111_02925 CDS
T09118
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nfc
Nocardioides faecalis
Brite
KEGG Orthology (KO) [BR:
nfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfc03021
]
KG111_02925
Transcription machinery [BR:
nfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KG111_02925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
KORA
DUF7343
HTH_3
HTH_37
HTH_23
WHD_DprA
HTH_31
TMP_3
DUF1780
Motif
Other DBs
NCBI-ProteinID:
QVI59340
LinkDB
All DBs
Position
630940..631830
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AA seq
296 aa
AA seq
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MSHAHPVSVAPGAARSGEASEADPLPTIPLGPLTGRVSDEGSAGTRKRRTAALLAEAASC
RGAERDRLLGEVIVLNIPVARSLAARYRNRGQGADELEQVACLALTRAVQGFDPERGDDL
LVFAVPTILGELKRHFRATSWAVRPPRRIQEIRPRLLAAADDLTQRLGHTPSADELADEL
GCSIAEVSEAVSCGDLSQAASLDEPVSATGSPLGELLGSEEEGFGQSEAVAMLGPACRDL
KPRDRRILRMRFYEQLTQQQIAVELGVTQVQVSRLLQRIFADLRRRIDAPEEPHAA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccatgctcaccccgtctccgtcgcccctggcgccgcccgctccggcgaggcaagc
gaggccgatccgctgcccaccatcccgctggggccactcaccgggcgggtctcggacgag
ggctccgcgggcacccgtaagcggcgcaccgccgccctgctcgccgaggccgcctcctgc
cgcggcgcggaacgcgaccgactcctgggcgaggtgatcgtcctgaacatccccgtggcc
cgctcgctggccgcccgctaccgcaaccgcgggcagggcgcggacgagctcgagcaggtg
gcctgcctcgcgctgacccgcgccgtgcagggcttcgaccccgaacgcggcgatgacctg
ctggtgttcgcagtgcccaccatcctcggtgagctcaagcgccacttccgcgccacgagc
tgggcggtgcgcccgccccggcgcatccaggagatccgtccccggctcctcgcggcggcc
gacgacctcacccagcgtctcgggcacacgccgtcggccgacgagctcgccgacgagctg
ggctgctcgatcgccgaggtcagcgaggcggtctcctgcggagacctgtcccaggccgcg
tccctcgacgagccggtctcggccaccggaagtccgctcggcgagctgctgggcagcgag
gaggagggcttcgggcagagcgaggcggtcgcgatgctcggaccagcgtgccgcgacctc
aagccccgggatcgccgcatcctgcggatgcgcttctacgaacagctcacccagcagcag
atcgcggtcgagctcggggtcacccaggtgcaggtgtcccggctcctgcagcgcatcttc
gccgacctgcgtcgcaggatcgatgccccggaggagccccacgccgcttga
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