Nocardioides faecalis: KG111_03365
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Entry
KG111_03365 CDS
T09118
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nfc
Nocardioides faecalis
Brite
KEGG Orthology (KO) [BR:
nfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfc03016
]
KG111_03365
Enzymes [BR:
nfc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KG111_03365
Transfer RNA biogenesis [BR:
nfc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KG111_03365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QVI59421
LinkDB
All DBs
Position
complement(726707..728002)
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AA seq
431 aa
AA seq
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MATESTPSTGPEQTPDQADQEAPRVELLRLSGGLPPVIDTPAALAEYCAALAAGSGPVAI
DAERASGYRYSNRAYLIQVKREGAGIGLIDPIPFGTLEPLAEAIGDAEWILHAATQDLPC
LAEVGLRPAALFDTELAGRLLDYPRVGLATLVESLLGRQLLKEHSAVDWSTRPLPEAWLE
YAALDVEVLVELRDLLAAELEETGKADWARQEFDHLLSFQPAVRVDAWRRTSGLHKVRGR
RTLAAVRALWETRDRIATERDVTPGRLIPDSAIVAAATAMPTSRGALMSTPGFHGRGASR
HAGDWLAAIRSAAELSEDELPTRTAVGDGPPAPRAWADKDPVAARRLELARAAVGALASE
HRLPTENLLTPDHLRRVMWSPPATREPAELLEAIVDQLRELGARSWQIGLTASALTSAVL
QADAPQPQSAG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgagtcgaccccgtcgaccgggccggagcagaccccggaccaggccgaccag
gaggcaccgcgcgtcgagctgctcaggctgagcggcgggctgcccccggtcatcgacacc
cctgctgcgctggccgagtactgcgcggccctggccgccggcagcggaccggtcgcgatc
gacgccgagcgcgcgtcgggctaccgctactccaaccgcgcctacctgatccaggtcaag
cgggagggtgcaggcatcggcctgatcgaccccatcccgttcggcaccctcgagccgctg
gccgaggcgatcggcgacgccgagtggatcctgcacgccgccacccaggacctgccgtgc
ctggccgaggtgggcctgcgcccggccgcgctcttcgacaccgagctcgccggccggctc
ctcgactacccccgcgtgggtctggccaccctggtggagtcgctgctcgggcggcagctg
ctcaaggagcactcggcggtggactggtcgacccggccgctgcccgaggcctggctggag
tacgccgcgctggacgtcgaggtgctcgtcgagctgcgtgacctgctggccgctgagctc
gaggagaccggcaaggccgactgggcgcgtcaggagttcgaccacctgctgtccttccag
cccgccgtgcgggtcgacgcctggcgtcgtacctcggggctgcacaaggtgcgcggacgc
cgcaccctggccgccgtccgtgccctgtgggagacccgggaccggatcgccaccgagcgc
gacgtcacccccgggcggctgatcccggacagcgcgatcgtggccgcggccaccgcgatg
ccgaccagccggggcgccctgatgtcgacccccggcttccatggccgcggcgcctcccgg
cacgcaggcgactggctggccgcgatccgttccgcggccgagctgagcgaggacgagctg
ccgacccgcacggccgtgggcgacggcccgccggcgcctcgtgcctgggcggacaaggac
ccggtcgcggcccggcgcctggagctggcgcgcgccgcggtgggcgcgctggcgtccgag
caccggttgccgaccgagaacctgctcactcccgaccacctgcgccgggtgatgtggtcg
ccgccggcgacccgggagcccgccgagctgctggaggcgatcgtcgaccagctgcgcgag
ctcggcgcccgcagctggcagatcgggctcaccgcctccgcgctgaccagcgcggtcctg
caggccgacgcgccgcagcctcagtccgcgggctga
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