Nocardioides faecalis: KG111_05110
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Entry
KG111_05110 CDS
T09118
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nfc
Nocardioides faecalis
Pathway
nfc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KG111_05110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfc03000
]
KG111_05110
03400 DNA repair and recombination proteins [BR:
nfc03400
]
KG111_05110
Enzymes [BR:
nfc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KG111_05110
Transcription factors [BR:
nfc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KG111_05110
DNA repair and recombination proteins [BR:
nfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KG111_05110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
Motif
Other DBs
NCBI-ProteinID:
QVI60486
LinkDB
All DBs
Position
1111573..1113180
Genome browser
AA seq
535 aa
AA seq
DB search
MLDFDACYTALRSRDRRFDGVFYVAVRTTGIYCRPSCPARTPAPVNVTFHRTAASAQASG
HRACKRCLPDATPGSPQWDVAGDVAGRAMRLIADGVVDRDGVPGLAARLGYTPRHLSRVL
VTELGAGPLALARTQRALTARALVESTDLPLADIAFAAGFASVRQFNATLREVYDATPTQ
LRTRRPDRSRGRLASGHGAGGLRLRIAVRTPFAGTALLRFLADRCVPGVEVATVGANGTG
RYARTLRLPHGPGAVEVELADLPGPGTSYVVIRLALHDLRDTAAAVARVRALLDADADPV
AVDAHLGTDPLLAPLVAARPGLRVPGHVDGAEVAVRAVLGQQVSVAAARTAAARLVAAHG
EPVATGTTTTNGTTGTTLSAIPGLTHLFPAPQALAALDVDDLRDAGVRMPGSRARALLGL
AEALAQGRLVLDRGPDRARVRADLLALPGIGPWTADYVALRALGHPDVWLPGDAGVRAAL
TARGADPAAAQRWAPWRSYALMHLWAGTTAGTTAGTTAGTSAGTTAAEKKAVGDS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacttcgacgcctgctacaccgcgctgcgctcgcgggaccggcgcttcgacggt
gtgttctacgtcgcggtccgcaccaccgggatctactgccgcccgtcctgcccggcccgg
acgccggccccggtcaacgtcaccttccaccgcaccgccgcctccgcccaagcctccggg
caccgcgcctgcaagcgctgcctgcccgacgccaccccgggcagcccgcagtgggacgtc
gccggcgacgtcgcgggccgggcgatgcggctgatcgccgacggcgtcgtcgaccgcgac
ggcgtccccggtctcgccgcccggctcgggtacaccccgcggcacctgtcccgcgtgctc
gtcaccgagctcggcgccgggccgctcgcgctggcccggacccagcgcgccctgaccgcc
cgagccctggtggagagcaccgacctgccgctggccgacatcgccttcgccgcgggcttc
gccagcgtgcgccagttcaacgccaccctgcgcgaggtgtacgacgcgacgcccacccag
ctgcgcacccggcgccccgaccggtcccgtggccgactcgcgtcgggccacggggcgggc
ggcctgcggctgcggatcgcggtccgcacgccgttcgccgggacggcgctgctgcgcttc
ctcgccgaccgctgcgtgcccggcgtcgaggtcgccaccgtgggtgccaacggcacgggc
aggtacgcgcgcaccctgcggctgccacacgggccgggagccgtcgaggtcgagctcgcc
gacctgcccgggccggggacgtcgtacgtcgtgatccggctggccctgcacgacctgcgc
gacacggccgcggcggtggcccgcgtccgggccctgctcgacgcggacgccgaccccgtc
gccgtcgacgcccacctcggcaccgacccgctgctcgcgccactggtcgccgcccggccg
ggcctgcgcgtacccggccacgtggacggcgccgaggtcgccgtgcgggcggtgctcggc
cagcaggtcagcgtcgcggcggcacgcaccgccgcggcccgcctcgtcgccgcccacggc
gagcccgtggcgaccgggacgaccacgacgaacgggaccaccgggaccaccctgtccgcg
atccccggcctgacgcacctcttcccggccccgcaggccctggcggcgctcgacgtcgac
gacctgcgcgacgccggggtccggatgcccggttcccgcgccagggccctgctcgggctc
gccgaggcgttggcgcagggccgcctcgtgctcgaccgcggcccggaccgggcccgggtg
cgcgccgacctgctggcgctgcccgggatcggcccgtggaccgccgactacgtcgcgctg
cgggccctcggccacccggacgtgtggctgccgggcgacgccggggtgcgcgccgcgctg
accgcccgcggcgcggacccggccgccgcgcagcgctgggcaccgtggcgctcgtacgcg
ctcatgcacctgtgggccggcacgacggcaggcacgacagcaggcacgacggcaggcacg
tcagccgggacgacggcggccgagaagaaggcggtgggagactcgtga
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